> top > docs > PMC:3589482 > spans > 583-790 > annotations

PMC:3589482 / 583-790 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T856 34-42 NN denotes promoter
T855 25-33 CD denotes SerpinB2
T854 11-24 JJ denotes LPS-regulated
T853 7-10 DT denotes the
T852 3-6 VB denotes map
T851 0-2 TO denotes To
T886 206-207 . denotes .
T885 195-206 NNS denotes macrophages
T884 188-194 JJ denotes murine
T883 183-187 IN denotes into
T882 175-182 NNS denotes mutants
T881 166-174 NN denotes deletion
T880 158-165 JJ denotes several
T879 154-157 CC denotes and
T878 149-153 NN denotes gene
T877 140-148 NNP denotes SerpinB2
T876 133-139 NN denotes murine
T875 129-132 DT denotes the
T874 126-128 IN denotes of
T873 119-125 NN denotes region
T872 110-118 VBG denotes flanking
T871 109-110 : denotes -
T870 108-109 '' denotes '
T869 107-108 CD denotes 5
T868 104-106 NN denotes kb
T867 102-103 CD denotes 5
T866 101-102 NN denotes ∼
T865 97-100 DT denotes the
T864 94-96 IN denotes by
T863 87-93 VBN denotes driven
T862 76-86 NNS denotes constructs
T861 67-75 NN denotes reporter
T860 55-66 VBD denotes transfected
T859 52-54 PRP denotes we
T858 50-51 , denotes ,
T857 43-50 NNS denotes regions
R438 T851 T852 aux To,map
R439 T852 T860 advcl map,transfected
R440 T853 T857 det the,regions
R441 T854 T857 amod LPS-regulated,regions
R442 T855 T857 nummod SerpinB2,regions
R443 T856 T857 compound promoter,regions
R444 T857 T852 dobj regions,map
R445 T858 T860 punct ",",transfected
R446 T859 T860 nsubj we,transfected
R447 T860 T860 ROOT transfected,transfected
R448 T861 T862 compound reporter,constructs
R449 T862 T860 dobj constructs,transfected
R450 T863 T862 acl driven,constructs
R451 T864 T863 agent by,driven
R452 T865 T873 det the,region
R453 T866 T868 nmod ∼,kb
R454 T867 T866 nummod 5,∼
R455 T868 T872 meta kb,flanking
R456 T869 T868 nummod 5,kb
R457 T870 T869 punct ',5
R458 T871 T872 punct -,flanking
R459 T872 T873 amod flanking,region
R460 T873 T864 pobj region,by
R461 T874 T873 prep of,region
R462 T875 T878 det the,gene
R463 T876 T878 compound murine,gene
R464 T877 T878 compound SerpinB2,gene
R465 T878 T874 pobj gene,of
R466 T879 T878 cc and,gene
R467 T880 T882 amod several,mutants
R468 T881 T882 compound deletion,mutants
R469 T882 T878 conj mutants,gene
R470 T883 T863 prep into,driven
R471 T884 T885 amod murine,macrophages
R472 T885 T883 pobj macrophages,into
R473 T886 T860 punct .,transfected

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T342 195-206 NN denotes macrophages
T341 188-194 JJ denotes murine
T340 183-187 IN denotes into
T339 175-182 NN denotes mutants
T338 166-174 NN denotes deletion
T337 158-165 JJ denotes several
T336 154-157 CC denotes and
T335 149-153 NN denotes gene
T334 140-148 NN denotes SerpinB2
T333 133-139 JJ denotes murine
T332 129-132 DT denotes the
T331 126-128 IN denotes of
T330 119-125 NN denotes region
T329 107-118 JJ denotes 5'-flanking
T328 104-106 NN denotes kb
T327 101-103 CD denotes ∼5
T326 97-100 DT denotes the
T325 94-96 IN denotes by
T324 87-93 VB denotes driven
T323 76-86 NN denotes constructs
T322 67-75 NN denotes reporter
T321 55-66 VB denotes transfected
T320 52-54 PRP denotes we
T319 50-51 -COMMA- denotes ,
T318 43-50 NN denotes regions
T317 34-42 NN denotes promoter
T316 25-33 NN denotes SerpinB2
T315 11-24 JJ denotes LPS-regulated
T314 7-10 DT denotes the
T313 3-6 VB denotes map
T312 0-2 TO denotes To
R123 T313 T312 arg1Of map,To
R124 T318 T313 arg2Of regions,map
R125 T318 T314 arg1Of regions,the
R126 T318 T315 arg1Of regions,LPS-regulated
R127 T318 T316 arg1Of regions,SerpinB2
R128 T318 T317 arg1Of regions,promoter
R129 T320 T313 arg1Of we,map
R130 T320 T321 arg1Of we,transfected
R131 T321 T312 modOf transfected,To
R132 T321 T319 arg1Of transfected,","
R133 T323 T321 arg2Of constructs,transfected
R134 T323 T322 arg1Of constructs,reporter
R135 T323 T324 arg2Of constructs,driven
R136 T330 T324 arg1Of region,driven
R137 T330 T325 arg2Of region,by
R138 T330 T326 arg1Of region,the
R139 T330 T327 arg1Of region,∼5
R140 T330 T328 arg1Of region,kb
R141 T330 T329 arg1Of region,5'-flanking
R142 T330 T331 arg1Of region,of
R143 T330 T340 arg1Of region,into
R144 T335 T332 arg1Of gene,the
R145 T335 T333 arg1Of gene,murine
R146 T335 T334 arg1Of gene,SerpinB2
R147 T335 T336 arg1Of gene,and
R148 T336 T331 arg2Of and,of
R149 T339 T336 arg2Of mutants,and
R150 T339 T337 arg1Of mutants,several
R151 T339 T338 arg1Of mutants,deletion
R152 T342 T340 arg2Of macrophages,into
R153 T342 T341 arg1Of macrophages,murine

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T165 25-33 Protein denotes SerpinB2
T166 140-148 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T532 25-33 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T533 140-148 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

sentences

Id Subject Object Predicate Lexical cue
T102 0-207 Sentence denotes To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion mutants into murine macrophages.
T6 0-207 Sentence denotes To map the LPS-regulated SerpinB2 promoter regions, we transfected reporter constructs driven by the ∼5 kb 5'-flanking region of the murine SerpinB2 gene and several deletion mutants into murine macrophages.

simple1

Id Subject Object Predicate Lexical cue
T218 25-33 Protein denotes SerpinB2
T219 140-148 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T500 25-33 Protein denotes SerpinB2
T499 140-148 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T609 140-148 Protein denotes SerpinB2
T610 25-33 Protein denotes SerpinB2

DLUT931

Id Subject Object Predicate Lexical cue
T575 140-148 Protein denotes SerpinB2
T576 25-33 Protein denotes SerpinB2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T753 140-148 Protein denotes SerpinB2
T720 25-33 Protein denotes SerpinB2
T726 188-206 Entity denotes murine macrophages
T729 7-51 Entity denotes the LPS-regulated SerpinB2 promoter regions,
T741 11-24 Entity denotes LPS-regulated
T743 126-153 Protein denotes of the murine SerpinB2 gene

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T649 133-153 Protein denotes murine SerpinB2 gene
T648 25-42 Protein denotes SerpinB2 promoter

testone

Id Subject Object Predicate Lexical cue
T29 140-148 Protein denotes SerpinB2
T28 25-33 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T80 140-148 Protein denotes SerpinB2
T79 25-33 Protein denotes SerpinB2
T58 140-148 Protein denotes SerpinB2
T57 25-33 Protein denotes SerpinB2