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PMC:3589482 / 577-751 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T856 40-48 NN denotes promoter
T855 31-39 CD denotes SerpinB2
T854 17-30 JJ denotes LPS-regulated
T853 13-16 DT denotes the
T852 9-12 VB denotes map
T851 6-8 TO denotes To
T850 4-5 . denotes .
T880 164-171 JJ denotes several
T879 160-163 CC denotes and
T878 155-159 NN denotes gene
T877 146-154 NNP denotes SerpinB2
T876 139-145 NN denotes murine
T875 135-138 DT denotes the
T874 132-134 IN denotes of
T873 125-131 NN denotes region
T872 116-124 VBG denotes flanking
T871 115-116 : denotes -
T870 114-115 '' denotes '
T869 113-114 CD denotes 5
T868 110-112 NN denotes kb
T867 108-109 CD denotes 5
T866 107-108 NN denotes ∼
T865 103-106 DT denotes the
T864 100-102 IN denotes by
T863 93-99 VBN denotes driven
T862 82-92 NNS denotes constructs
T861 73-81 NN denotes reporter
T860 61-72 VBD denotes transfected
T859 58-60 PRP denotes we
T858 56-57 , denotes ,
T857 49-56 NNS denotes regions
R438 T851 T852 aux To,map
R439 T852 T860 advcl map,transfected
R440 T853 T857 det the,regions
R441 T854 T857 amod LPS-regulated,regions
R442 T855 T857 nummod SerpinB2,regions
R443 T856 T857 compound promoter,regions
R444 T857 T852 dobj regions,map
R445 T858 T860 punct ",",transfected
R446 T859 T860 nsubj we,transfected
R447 T860 T860 ROOT transfected,transfected
R448 T861 T862 compound reporter,constructs
R449 T862 T860 dobj constructs,transfected
R450 T863 T862 acl driven,constructs
R451 T864 T863 agent by,driven
R452 T865 T873 det the,region
R453 T866 T868 nmod ∼,kb
R454 T867 T866 nummod 5,∼
R455 T868 T872 meta kb,flanking
R456 T869 T868 nummod 5,kb
R457 T870 T869 punct ',5
R458 T871 T872 punct -,flanking
R459 T872 T873 amod flanking,region
R460 T873 T864 pobj region,by
R461 T874 T873 prep of,region
R462 T875 T878 det the,gene
R463 T876 T878 compound murine,gene
R464 T877 T878 compound SerpinB2,gene
R465 T878 T874 pobj gene,of
R466 T879 T878 cc and,gene

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T337 164-171 JJ denotes several
T336 160-163 CC denotes and
T335 155-159 NN denotes gene
T334 146-154 NN denotes SerpinB2
T333 139-145 JJ denotes murine
T332 135-138 DT denotes the
T331 132-134 IN denotes of
T330 125-131 NN denotes region
T329 113-124 JJ denotes 5'-flanking
T328 110-112 NN denotes kb
T327 107-109 CD denotes ∼5
T326 103-106 DT denotes the
T325 100-102 IN denotes by
T324 93-99 VB denotes driven
T323 82-92 NN denotes constructs
T322 73-81 NN denotes reporter
T321 61-72 VB denotes transfected
T320 58-60 PRP denotes we
T319 56-57 -COMMA- denotes ,
T318 49-56 NN denotes regions
T317 40-48 NN denotes promoter
T316 31-39 NN denotes SerpinB2
T315 17-30 JJ denotes LPS-regulated
T314 13-16 DT denotes the
T313 9-12 VB denotes map
T312 6-8 TO denotes To
R123 T313 T312 arg1Of map,To
R124 T318 T313 arg2Of regions,map
R125 T318 T314 arg1Of regions,the
R126 T318 T315 arg1Of regions,LPS-regulated
R127 T318 T316 arg1Of regions,SerpinB2
R128 T318 T317 arg1Of regions,promoter
R129 T320 T313 arg1Of we,map
R130 T320 T321 arg1Of we,transfected
R131 T321 T312 modOf transfected,To
R132 T321 T319 arg1Of transfected,","
R133 T323 T321 arg2Of constructs,transfected
R134 T323 T322 arg1Of constructs,reporter
R135 T323 T324 arg2Of constructs,driven
R136 T330 T324 arg1Of region,driven
R137 T330 T325 arg2Of region,by
R138 T330 T326 arg1Of region,the
R139 T330 T327 arg1Of region,∼5
R140 T330 T328 arg1Of region,kb
R141 T330 T329 arg1Of region,5'-flanking
R142 T330 T331 arg1Of region,of
R144 T335 T332 arg1Of gene,the
R145 T335 T333 arg1Of gene,murine
R146 T335 T334 arg1Of gene,SerpinB2
R147 T335 T336 arg1Of gene,and
R148 T336 T331 arg2Of and,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T165 31-39 Protein denotes SerpinB2
T166 146-154 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T532 31-39 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T533 146-154 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

simple1

Id Subject Object Predicate Lexical cue
T218 31-39 Protein denotes SerpinB2
T219 146-154 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T500 31-39 Protein denotes SerpinB2
T499 146-154 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T609 146-154 Protein denotes SerpinB2
T610 31-39 Protein denotes SerpinB2

DLUT931

Id Subject Object Predicate Lexical cue
T575 146-154 Protein denotes SerpinB2
T576 31-39 Protein denotes SerpinB2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T753 146-154 Protein denotes SerpinB2
T720 31-39 Protein denotes SerpinB2
T729 13-57 Entity denotes the LPS-regulated SerpinB2 promoter regions,
T741 17-30 Entity denotes LPS-regulated
T743 132-159 Protein denotes of the murine SerpinB2 gene

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T649 139-159 Protein denotes murine SerpinB2 gene
T648 31-48 Protein denotes SerpinB2 promoter

testone

Id Subject Object Predicate Lexical cue
T29 146-154 Protein denotes SerpinB2
T28 31-39 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T80 146-154 Protein denotes SerpinB2
T79 31-39 Protein denotes SerpinB2
T58 146-154 Protein denotes SerpinB2
T57 31-39 Protein denotes SerpinB2