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PMC:3589482 / 571-772 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T856 46-54 NN denotes promoter
T855 37-45 CD denotes SerpinB2
T854 23-36 JJ denotes LPS-regulated
T853 19-22 DT denotes the
T852 15-18 VB denotes map
T851 12-14 TO denotes To
T850 10-11 . denotes .
T883 195-199 IN denotes into
T882 187-194 NNS denotes mutants
T881 178-186 NN denotes deletion
T880 170-177 JJ denotes several
T879 166-169 CC denotes and
T878 161-165 NN denotes gene
T877 152-160 NNP denotes SerpinB2
T876 145-151 NN denotes murine
T875 141-144 DT denotes the
T874 138-140 IN denotes of
T873 131-137 NN denotes region
T872 122-130 VBG denotes flanking
T871 121-122 : denotes -
T870 120-121 '' denotes '
T869 119-120 CD denotes 5
T868 116-118 NN denotes kb
T867 114-115 CD denotes 5
T866 113-114 NN denotes ∼
T865 109-112 DT denotes the
T864 106-108 IN denotes by
T863 99-105 VBN denotes driven
T862 88-98 NNS denotes constructs
T861 79-87 NN denotes reporter
T860 67-78 VBD denotes transfected
T859 64-66 PRP denotes we
T858 62-63 , denotes ,
T857 55-62 NNS denotes regions
R438 T851 T852 aux To,map
R439 T852 T860 advcl map,transfected
R440 T853 T857 det the,regions
R441 T854 T857 amod LPS-regulated,regions
R442 T855 T857 nummod SerpinB2,regions
R443 T856 T857 compound promoter,regions
R444 T857 T852 dobj regions,map
R445 T858 T860 punct ",",transfected
R446 T859 T860 nsubj we,transfected
R447 T860 T860 ROOT transfected,transfected
R448 T861 T862 compound reporter,constructs
R449 T862 T860 dobj constructs,transfected
R450 T863 T862 acl driven,constructs
R451 T864 T863 agent by,driven
R452 T865 T873 det the,region
R453 T866 T868 nmod ∼,kb
R454 T867 T866 nummod 5,∼
R455 T868 T872 meta kb,flanking
R456 T869 T868 nummod 5,kb
R457 T870 T869 punct ',5
R458 T871 T872 punct -,flanking
R459 T872 T873 amod flanking,region
R460 T873 T864 pobj region,by
R461 T874 T873 prep of,region
R462 T875 T878 det the,gene
R463 T876 T878 compound murine,gene
R464 T877 T878 compound SerpinB2,gene
R465 T878 T874 pobj gene,of
R466 T879 T878 cc and,gene
R467 T880 T882 amod several,mutants
R468 T881 T882 compound deletion,mutants
R469 T882 T878 conj mutants,gene
R470 T883 T863 prep into,driven

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T340 195-199 IN denotes into
T339 187-194 NN denotes mutants
T338 178-186 NN denotes deletion
T337 170-177 JJ denotes several
T336 166-169 CC denotes and
T335 161-165 NN denotes gene
T334 152-160 NN denotes SerpinB2
T333 145-151 JJ denotes murine
T332 141-144 DT denotes the
T331 138-140 IN denotes of
T330 131-137 NN denotes region
T329 119-130 JJ denotes 5'-flanking
T328 116-118 NN denotes kb
T327 113-115 CD denotes ∼5
T326 109-112 DT denotes the
T325 106-108 IN denotes by
T324 99-105 VB denotes driven
T323 88-98 NN denotes constructs
T322 79-87 NN denotes reporter
T321 67-78 VB denotes transfected
T320 64-66 PRP denotes we
T319 62-63 -COMMA- denotes ,
T318 55-62 NN denotes regions
T317 46-54 NN denotes promoter
T316 37-45 NN denotes SerpinB2
T315 23-36 JJ denotes LPS-regulated
T314 19-22 DT denotes the
T313 15-18 VB denotes map
T312 12-14 TO denotes To
R123 T313 T312 arg1Of map,To
R124 T318 T313 arg2Of regions,map
R125 T318 T314 arg1Of regions,the
R126 T318 T315 arg1Of regions,LPS-regulated
R127 T318 T316 arg1Of regions,SerpinB2
R128 T318 T317 arg1Of regions,promoter
R129 T320 T313 arg1Of we,map
R130 T320 T321 arg1Of we,transfected
R131 T321 T312 modOf transfected,To
R132 T321 T319 arg1Of transfected,","
R133 T323 T321 arg2Of constructs,transfected
R134 T323 T322 arg1Of constructs,reporter
R135 T323 T324 arg2Of constructs,driven
R136 T330 T324 arg1Of region,driven
R137 T330 T325 arg2Of region,by
R138 T330 T326 arg1Of region,the
R139 T330 T327 arg1Of region,∼5
R140 T330 T328 arg1Of region,kb
R141 T330 T329 arg1Of region,5'-flanking
R142 T330 T331 arg1Of region,of
R143 T330 T340 arg1Of region,into
R144 T335 T332 arg1Of gene,the
R145 T335 T333 arg1Of gene,murine
R146 T335 T334 arg1Of gene,SerpinB2
R147 T335 T336 arg1Of gene,and
R148 T336 T331 arg2Of and,of
R149 T339 T336 arg2Of mutants,and
R150 T339 T337 arg1Of mutants,several
R151 T339 T338 arg1Of mutants,deletion

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T165 37-45 Protein denotes SerpinB2
T166 152-160 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T532 37-45 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T533 152-160 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

simple1

Id Subject Object Predicate Lexical cue
T218 37-45 Protein denotes SerpinB2
T219 152-160 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T500 37-45 Protein denotes SerpinB2
T499 152-160 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T609 152-160 Protein denotes SerpinB2
T610 37-45 Protein denotes SerpinB2

DLUT931

Id Subject Object Predicate Lexical cue
T575 152-160 Protein denotes SerpinB2
T576 37-45 Protein denotes SerpinB2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T753 152-160 Protein denotes SerpinB2
T720 37-45 Protein denotes SerpinB2
T729 19-63 Entity denotes the LPS-regulated SerpinB2 promoter regions,
T741 23-36 Entity denotes LPS-regulated
T743 138-165 Protein denotes of the murine SerpinB2 gene

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T649 145-165 Protein denotes murine SerpinB2 gene
T648 37-54 Protein denotes SerpinB2 promoter

testone

Id Subject Object Predicate Lexical cue
T29 152-160 Protein denotes SerpinB2
T28 37-45 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T80 152-160 Protein denotes SerpinB2
T79 37-45 Protein denotes SerpinB2
T58 152-160 Protein denotes SerpinB2
T57 37-45 Protein denotes SerpinB2