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PMC:3589482 / 50-233 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T771 5-8 CC denotes and
T772 9-22 JJ denotes LPS-Inducible
T773 23-36 NN denotes Transcription
T774 37-39 IN denotes of
T775 40-46 NNP denotes Murine
T776 47-55 NNP denotes SerpinB2
T789 175-182 VBN denotes induced
T788 168-174 RB denotes highly
T787 165-167 VBZ denotes is
T786 163-164 -RRB- denotes )
T785 158-163 NN denotes PAI-2
T784 157-158 -LRB- denotes (
T783 155-156 CD denotes 2
T782 150-154 NN denotes type
T781 140-149 NN denotes inhibitor
T780 130-139 NN denotes activator
T779 118-129 NN denotes plasminogen
T778 115-117 CC denotes or
T777 106-114 NNP denotes SerpinB2
R360 T773 T789 nsubjpass Transcription,induced
R361 T774 T773 prep of,Transcription
R362 T775 T777 compound Murine,SerpinB2
R363 T776 T777 compound SerpinB2,SerpinB2
R364 T777 T774 pobj SerpinB2,of
R365 T778 T777 cc or,SerpinB2
R366 T779 T773 conj plasminogen,Transcription
R367 T780 T781 amod activator,inhibitor
R368 T781 T782 compound inhibitor,type
R369 T782 T773 appos type,Transcription
R370 T783 T782 nummod 2,type
R371 T784 T782 punct (,type
R372 T785 T782 appos PAI-2,type
R373 T786 T782 punct ),type
R374 T787 T789 auxpass is,induced
R375 T788 T789 advmod highly,induced
R376 T789 T789 ROOT induced,induced

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T239 40-46 NNP denotes Murine
T240 47-55 NN denotes SerpinB2
T253 175-182 VB denotes induced
T252 168-174 RB denotes highly
T251 165-167 VB denotes is
T250 163-164 -RRB- denotes )
T249 158-163 NN denotes PAI-2
T248 157-158 -LRB- denotes (
T247 155-156 CD denotes 2
T246 150-154 NN denotes type
T245 140-149 NN denotes inhibitor
T244 130-139 NN denotes activator
T243 118-129 NN denotes plasminogen
T242 115-117 CC denotes or
T241 106-114 NN denotes SerpinB2
T235 5-8 CC denotes and
T236 9-22 JJ denotes LPS-Inducible
T237 23-36 NN denotes Transcription
T238 37-39 IN denotes of
R47 T240 T238 arg2Of SerpinB2,of
R48 T240 T239 arg1Of SerpinB2,Murine
R49 T241 T242 arg1Of SerpinB2,or
R50 T243 T242 arg2Of plasminogen,or
R51 T246 T241 arg1Of type,SerpinB2
R52 T246 T243 arg1Of type,plasminogen
R53 T246 T244 arg1Of type,activator
R54 T246 T245 arg1Of type,inhibitor
R55 T246 T247 arg1Of type,2
R56 T246 T248 arg1Of type,(
R57 T246 T251 arg1Of type,is
R58 T246 T253 arg2Of type,induced
R61 T249 T248 arg2Of PAI-2,(
R62 T250 T248 arg3Of ),(
R63 T253 T251 arg2Of induced,is
R64 T253 T252 arg1Of induced,highly
R671 T236 T235 arg2Of LPS-Inducible,and
R674 T237 T236 arg1Of Transcription,LPS-Inducible
R675 T237 T238 arg1Of Transcription,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T158 47-55 Protein denotes SerpinB2
T159 106-114 Protein denotes SerpinB2
T160 118-156 Protein denotes plasminogen activator inhibitor type 2
T161 158-163 Protein denotes PAI-2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T530 106-114 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T537 155-161 http://www.uniprot.org/uniprot/P05120 denotes 2 (PAI
T529 47-55 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T177 23-36 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T178 118-139 http://purl.obolibrary.org/obo/GO_0031639 denotes plasminogen activator

sentences

Id Subject Object Predicate Lexical cue
T2 56-95 Sentence denotes C/EBP-β Mediates SerpinB2 Transcription
T3 97-105 Sentence denotes Abstract

simple1

Id Subject Object Predicate Lexical cue
T212 106-114 Protein denotes SerpinB2
T213 118-156 Protein denotes plasminogen activator inhibitor type 2
T214 158-163 Protein denotes PAI-2
T211 47-55 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T510 9-22 Positive_regulation denotes LPS-Inducible
T511 23-36 Transcription denotes Transcription
T512 175-182 Positive_regulation denotes induced
T492 47-55 Protein denotes SerpinB2
T493 106-114 Protein denotes SerpinB2
T494 118-156 Protein denotes plasminogen activator inhibitor type 2
T495 158-163 Protein denotes PAI-2
R307 T511 T510 themeOf Transcription,LPS-Inducible
R676 T492 T511 themeOf SerpinB2,Transcription
R677 T493 T512 themeOf SerpinB2,induced
R678 T494 T512 themeOf plasminogen activator inhibitor type 2,induced
R679 T495 T512 themeOf PAI-2,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T602 47-55 Protein denotes SerpinB2
T620 23-36 Transcription denotes Transcription
T603 106-114 Protein denotes SerpinB2
T604 118-156 Protein denotes plasminogen activator inhibitor type 2
T605 158-163 Protein denotes PAI-2
T622 175-182 Positive_regulation denotes induced
R715 T602 T620 themeOf SerpinB2,Transcription
R717 T604 T622 themeOf plasminogen activator inhibitor type 2,induced

DLUT931

Id Subject Object Predicate Lexical cue
T568 47-55 Protein denotes SerpinB2
T586 23-36 Transcription denotes Transcription
T588 9-22 Positive_regulation denotes LPS-Inducible
T569 106-114 Protein denotes SerpinB2
T570 118-156 Protein denotes plasminogen activator inhibitor type 2
T571 158-163 Protein denotes PAI-2
T589 175-182 Positive_regulation denotes induced
R684 T570 T589 themeOf plasminogen activator inhibitor type 2,induced
R682 T568 T586 themeOf SerpinB2,Transcription
R683 T569 T589 themeOf SerpinB2,induced
R692 T586 T588 themeOf Transcription,LPS-Inducible

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T749 37-55 Protein denotes of Murine SerpinB2
T758 9-55 Transcription denotes LPS-Inducible Transcription of Murine SerpinB2
T739 158-163 Protein denotes PAI-2
T740 106-164 Protein denotes SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2)
T744 118-164 Protein denotes plasminogen activator inhibitor type 2 (PAI-2)
R349 T749 T758 themeOf of Murine SerpinB2,LPS-Inducible Transcription of Murine SerpinB2

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T643 175-182 Positive_regulation denotes induced
T642 175-182 Positive_regulation denotes induced
T640 158-163 Protein denotes PAI-2
T636 40-55 Protein denotes Murine SerpinB2
T637 23-36 Transcription denotes Transcription
T639 118-156 Protein denotes plasminogen activator inhibitor type 2
R322 T640 T643 themeOf PAI-2,induced
R704 T636 T637 themeOf Murine SerpinB2,Transcription
R706 T639 T642 themeOf plasminogen activator inhibitor type 2,induced

testone

Id Subject Object Predicate Lexical cue
T21 47-55 Protein denotes SerpinB2
T24 158-163 Protein denotes PAI-2
T23 118-156 Protein denotes plasminogen activator inhibitor type 2
T22 106-114 Protein denotes SerpinB2
R1 T24 T23 equivalentTo PAI-2,plasminogen activator inhibitor type 2

test3

Id Subject Object Predicate Lexical cue
T50 47-55 Protein denotes SerpinB2
T69 47-55 Protein denotes SerpinB2
T73 175-182 Positive_regulation denotes induced
T72 158-163 Protein denotes PAI-2
T71 118-156 Protein denotes plasminogen activator inhibitor type 2
T70 106-114 Protein denotes SerpinB2
T53 158-163 Protein denotes PAI-2
T52 118-156 Protein denotes plasminogen activator inhibitor type 2
T51 106-114 Protein denotes SerpinB2
R15 T71 T73 themeOf plasminogen activator inhibitor type 2,induced
R16 T72 T71 equivalentTo PAI-2,plasminogen activator inhibitor type 2