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PMC:3589482 / 48-255 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T771 7-10 CC denotes and
T772 11-24 JJ denotes LPS-Inducible
T773 25-38 NN denotes Transcription
T774 39-41 IN denotes of
T775 42-48 NNP denotes Murine
T776 49-57 NNP denotes SerpinB2
T792 200-202 IN denotes in
T791 188-199 NNS denotes macrophages
T790 185-187 IN denotes in
T789 177-184 VBN denotes induced
T788 170-176 RB denotes highly
T787 167-169 VBZ denotes is
T786 165-166 -RRB- denotes )
T785 160-165 NN denotes PAI-2
T784 159-160 -LRB- denotes (
T783 157-158 CD denotes 2
T782 152-156 NN denotes type
T781 142-151 NN denotes inhibitor
T780 132-141 NN denotes activator
T779 120-131 NN denotes plasminogen
T778 117-119 CC denotes or
T777 108-116 NNP denotes SerpinB2
R360 T773 T789 nsubjpass Transcription,induced
R361 T774 T773 prep of,Transcription
R362 T775 T777 compound Murine,SerpinB2
R363 T776 T777 compound SerpinB2,SerpinB2
R364 T777 T774 pobj SerpinB2,of
R365 T778 T777 cc or,SerpinB2
R366 T779 T773 conj plasminogen,Transcription
R367 T780 T781 amod activator,inhibitor
R368 T781 T782 compound inhibitor,type
R369 T782 T773 appos type,Transcription
R370 T783 T782 nummod 2,type
R371 T784 T782 punct (,type
R372 T785 T782 appos PAI-2,type
R373 T786 T782 punct ),type
R374 T787 T789 auxpass is,induced
R375 T788 T789 advmod highly,induced
R376 T789 T789 ROOT induced,induced
R377 T790 T789 prep in,induced
R378 T791 T790 pobj macrophages,in
R379 T792 T789 prep in,induced

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T239 42-48 NNP denotes Murine
T240 49-57 NN denotes SerpinB2
T256 200-202 IN denotes in
T255 188-199 NN denotes macrophages
T254 185-187 IN denotes in
T253 177-184 VB denotes induced
T252 170-176 RB denotes highly
T251 167-169 VB denotes is
T250 165-166 -RRB- denotes )
T249 160-165 NN denotes PAI-2
T248 159-160 -LRB- denotes (
T247 157-158 CD denotes 2
T246 152-156 NN denotes type
T245 142-151 NN denotes inhibitor
T244 132-141 NN denotes activator
T243 120-131 NN denotes plasminogen
T242 117-119 CC denotes or
T241 108-116 NN denotes SerpinB2
T235 7-10 CC denotes and
T236 11-24 JJ denotes LPS-Inducible
T237 25-38 NN denotes Transcription
T238 39-41 IN denotes of
R47 T240 T238 arg2Of SerpinB2,of
R48 T240 T239 arg1Of SerpinB2,Murine
R49 T241 T242 arg1Of SerpinB2,or
R50 T243 T242 arg2Of plasminogen,or
R51 T246 T241 arg1Of type,SerpinB2
R52 T246 T243 arg1Of type,plasminogen
R53 T246 T244 arg1Of type,activator
R54 T246 T245 arg1Of type,inhibitor
R55 T246 T247 arg1Of type,2
R56 T246 T248 arg1Of type,(
R57 T246 T251 arg1Of type,is
R58 T246 T253 arg2Of type,induced
R61 T249 T248 arg2Of PAI-2,(
R62 T250 T248 arg3Of ),(
R63 T253 T251 arg2Of induced,is
R64 T253 T252 arg1Of induced,highly
R65 T253 T254 arg1Of induced,in
R66 T253 T256 arg1Of induced,in
R68 T255 T254 arg2Of macrophages,in
R671 T236 T235 arg2Of LPS-Inducible,and
R674 T237 T236 arg1Of Transcription,LPS-Inducible
R675 T237 T238 arg1Of Transcription,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T158 49-57 Protein denotes SerpinB2
T159 108-116 Protein denotes SerpinB2
T160 120-158 Protein denotes plasminogen activator inhibitor type 2
T161 160-165 Protein denotes PAI-2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T530 108-116 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T537 157-163 http://www.uniprot.org/uniprot/P05120 denotes 2 (PAI
T529 49-57 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T177 25-38 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T178 120-141 http://purl.obolibrary.org/obo/GO_0031639 denotes plasminogen activator

sentences

Id Subject Object Predicate Lexical cue
T2 58-97 Sentence denotes C/EBP-β Mediates SerpinB2 Transcription
T3 99-107 Sentence denotes Abstract

simple1

Id Subject Object Predicate Lexical cue
T212 108-116 Protein denotes SerpinB2
T213 120-158 Protein denotes plasminogen activator inhibitor type 2
T214 160-165 Protein denotes PAI-2
T211 49-57 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T510 11-24 Positive_regulation denotes LPS-Inducible
T511 25-38 Transcription denotes Transcription
T512 177-184 Positive_regulation denotes induced
T492 49-57 Protein denotes SerpinB2
T493 108-116 Protein denotes SerpinB2
T494 120-158 Protein denotes plasminogen activator inhibitor type 2
T495 160-165 Protein denotes PAI-2
R307 T511 T510 themeOf Transcription,LPS-Inducible
R676 T492 T511 themeOf SerpinB2,Transcription
R677 T493 T512 themeOf SerpinB2,induced
R678 T494 T512 themeOf plasminogen activator inhibitor type 2,induced
R679 T495 T512 themeOf PAI-2,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T602 49-57 Protein denotes SerpinB2
T620 25-38 Transcription denotes Transcription
T603 108-116 Protein denotes SerpinB2
T604 120-158 Protein denotes plasminogen activator inhibitor type 2
T605 160-165 Protein denotes PAI-2
T622 177-184 Positive_regulation denotes induced
R715 T602 T620 themeOf SerpinB2,Transcription
R717 T604 T622 themeOf plasminogen activator inhibitor type 2,induced

DLUT931

Id Subject Object Predicate Lexical cue
T568 49-57 Protein denotes SerpinB2
T586 25-38 Transcription denotes Transcription
T588 11-24 Positive_regulation denotes LPS-Inducible
T569 108-116 Protein denotes SerpinB2
T570 120-158 Protein denotes plasminogen activator inhibitor type 2
T571 160-165 Protein denotes PAI-2
T589 177-184 Positive_regulation denotes induced
R684 T570 T589 themeOf plasminogen activator inhibitor type 2,induced
R682 T568 T586 themeOf SerpinB2,Transcription
R683 T569 T589 themeOf SerpinB2,induced
R692 T586 T588 themeOf Transcription,LPS-Inducible

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T749 39-57 Protein denotes of Murine SerpinB2
T758 11-57 Transcription denotes LPS-Inducible Transcription of Murine SerpinB2
T723 188-199 Entity denotes macrophages
T739 160-165 Protein denotes PAI-2
T740 108-166 Protein denotes SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2)
T744 120-166 Protein denotes plasminogen activator inhibitor type 2 (PAI-2)
R349 T749 T758 themeOf of Murine SerpinB2,LPS-Inducible Transcription of Murine SerpinB2

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T643 177-184 Positive_regulation denotes induced
T642 177-184 Positive_regulation denotes induced
T640 160-165 Protein denotes PAI-2
T636 42-57 Protein denotes Murine SerpinB2
T637 25-38 Transcription denotes Transcription
T639 120-158 Protein denotes plasminogen activator inhibitor type 2
R322 T640 T643 themeOf PAI-2,induced
R704 T636 T637 themeOf Murine SerpinB2,Transcription
R706 T639 T642 themeOf plasminogen activator inhibitor type 2,induced

testone

Id Subject Object Predicate Lexical cue
T21 49-57 Protein denotes SerpinB2
T24 160-165 Protein denotes PAI-2
T23 120-158 Protein denotes plasminogen activator inhibitor type 2
T22 108-116 Protein denotes SerpinB2
R1 T24 T23 equivalentTo PAI-2,plasminogen activator inhibitor type 2

test3

Id Subject Object Predicate Lexical cue
T50 49-57 Protein denotes SerpinB2
T69 49-57 Protein denotes SerpinB2
T73 177-184 Positive_regulation denotes induced
T72 160-165 Protein denotes PAI-2
T71 120-158 Protein denotes plasminogen activator inhibitor type 2
T70 108-116 Protein denotes SerpinB2
T53 160-165 Protein denotes PAI-2
T52 120-158 Protein denotes plasminogen activator inhibitor type 2
T51 108-116 Protein denotes SerpinB2
R15 T71 T73 themeOf plasminogen activator inhibitor type 2,induced
R16 T72 T71 equivalentTo PAI-2,plasminogen activator inhibitor type 2