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PMC:3589482 / 45259-45368 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21961 101-109 NN denotes activity
T21960 92-100 NN denotes promoter
T21959 83-91 CD denotes SerpinB2
T21958 71-82 JJ denotes LPS-induced
T21957 61-70 VBZ denotes regulates
T21956 50-60 RB denotes negatively
T21955 46-49 CD denotes S64
T21954 43-45 IN denotes at
T21953 41-42 NN denotes β
T21952 40-41 : denotes -
T21951 35-40 NNP denotes C/EBP
T21950 32-34 IN denotes of
T21949 16-31 NN denotes phosphorylation
T21948 11-15 IN denotes that
T21947 0-10 VBG denotes indicating
R15797 T21949 T21957 nsubj phosphorylation,regulates
R15802 T21950 T21949 prep of,phosphorylation
R15807 T21951 T21950 pobj C/EBP,of
R15810 T21952 T21953 punct -,β
R15812 T21947 T21947 ROOT indicating,indicating
R15813 T21948 T21957 mark that,regulates
R15814 T21953 T21949 conj β,phosphorylation
R15815 T21954 T21949 prep at,phosphorylation
R15816 T21955 T21954 pobj S64,at
R15819 T21956 T21957 advmod negatively,regulates
R15822 T21957 T21947 ccomp regulates,indicating
R15825 T21958 T21961 amod LPS-induced,activity
R15829 T21959 T21961 nummod SerpinB2,activity
R15832 T21960 T21961 compound promoter,activity
R15836 T21961 T21957 dobj activity,regulates

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19679 101-109 NN denotes activity
T19678 92-100 NN denotes promoter
T19677 83-91 NN denotes SerpinB2
T19676 71-82 JJ denotes LPS-induced
T19675 61-70 VB denotes regulates
T19674 50-60 RB denotes negatively
T19673 46-49 NN denotes S64
T19672 43-45 IN denotes at
T19671 35-42 NN denotes C/EBP-β
T19670 32-34 IN denotes of
T19669 16-31 NN denotes phosphorylation
T19668 11-15 IN denotes that
T19667 0-10 VB denotes indicating
R14159 T19669 T19670 arg1Of phosphorylation,of
R14160 T19669 T19672 arg1Of phosphorylation,at
R14161 T19669 T19675 arg1Of phosphorylation,regulates
R14162 T19671 T19670 arg2Of C/EBP-β,of
R14163 T19673 T19672 arg2Of S64,at
R14164 T19675 T19667 arg2Of regulates,indicating
R14165 T19675 T19668 arg1Of regulates,that
R14166 T19675 T19674 arg1Of regulates,negatively
R14167 T19679 T19675 arg2Of activity,regulates
R14168 T19679 T19676 arg1Of activity,LPS-induced
R14169 T19679 T19677 arg1Of activity,SerpinB2
R14170 T19679 T19678 arg1Of activity,promoter

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T18771 83-91 Protein denotes SerpinB2
T18770 35-42 Protein denotes C/EBP-β

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20264 35-42 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20234 83-91 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T18831 16-31 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

simple1

Id Subject Object Predicate Lexical cue
T18908 83-91 Protein denotes SerpinB2
T18907 35-42 Protein denotes C/EBP-β

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T20191 61-70 Regulation denotes regulates
T20189 16-31 Phosphorylation denotes phosphorylation
T20187 71-82 Positive_regulation denotes LPS-induced
T20116 83-91 Protein denotes SerpinB2
T20115 35-42 Protein denotes C/EBP-β
R14560 T20115 T20189 themeOf C/EBP-β,phosphorylation
R14561 T20116 T20191 themeOf SerpinB2,regulates
R14562 T20116 T20187 themeOf SerpinB2,LPS-induced
R14605 T20187 T20191 themeOf LPS-induced,regulates

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20630 16-31 Phosphorylation denotes phosphorylation
T20629 71-82 Positive_regulation denotes LPS-induced
T20628 61-70 Regulation denotes regulates
T20566 83-91 Protein denotes SerpinB2
T20565 35-42 Protein denotes C/EBP-β
R14771 T20565 T20630 themeOf C/EBP-β,phosphorylation
R14772 T20566 T20629 themeOf SerpinB2,LPS-induced
R14797 T20629 T20628 themeOf LPS-induced,regulates
R14798 T20630 T20628 causeOf phosphorylation,regulates

DLUT931

Id Subject Object Predicate Lexical cue
T20409 71-82 Positive_regulation denotes LPS-induced
T20408 61-70 Regulation denotes regulates
T20407 16-31 Phosphorylation denotes phosphorylation
T20340 83-91 Protein denotes SerpinB2
T20339 35-42 Protein denotes C/EBP-β
R14653 T20339 T20407 themeOf C/EBP-β,phosphorylation
R14654 T20340 T20408 themeOf SerpinB2,regulates
R14655 T20340 T20409 themeOf SerpinB2,LPS-induced
R14693 T20407 T20408 causeOf phosphorylation,regulates
R14694 T20407 T20408 causeOf phosphorylation,regulates
R14695 T20409 T20408 themeOf LPS-induced,regulates

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T21105 0-109 Regulation denotes indicating that phosphorylation of C/EBP-β at S64 negatively regulates LPS-induced SerpinB2 promoter activity
T21099 16-49 Phosphorylation denotes phosphorylation of C/EBP-β at S64
T21051 71-82 Entity denotes LPS-induced
T20974 83-91 Protein denotes SerpinB2
T20939 46-49 Entity denotes S64
T20924 83-100 Entity denotes SerpinB2 promoter
T20915 32-42 Protein denotes of C/EBP-β
R14935 T20915 T21099 themeOf of C/EBP-β,phosphorylation of C/EBP-β at S64
R14939 T20939 T20915 partOf S64,of C/EBP-β
R14940 T20939 T21099 siteOf S64,phosphorylation of C/EBP-β at S64
R14976 T21099 T21105 causeOf phosphorylation of C/EBP-β at S64,indicating that phosphorylation of C/EBP-β at S64 negatively regulates LPS-induced SerpinB2 promoter activity

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T20744 61-70 Regulation denotes regulates
T20743 16-31 Phosphorylation denotes phosphorylation
T20740 83-100 Protein denotes SerpinB2 promoter
T20739 35-42 Protein denotes C/EBP-β
R14853 T20739 T20743 themeOf C/EBP-β,phosphorylation
R14855 T20743 T20744 themeOf phosphorylation,regulates

testone

Id Subject Object Predicate Lexical cue
T18274 16-31 Phosphorylation denotes phosphorylation
T18219 83-91 Protein denotes SerpinB2
T18218 35-42 Protein denotes C/EBP-β
R13139 T18218 T18274 themeOf C/EBP-β,phosphorylation

test3

Id Subject Object Predicate Lexical cue
T18452 83-91 Protein denotes SerpinB2
T18451 75-82 Positive_regulation denotes induced
T18450 61-70 Regulation denotes regulates
T18449 35-42 Protein denotes C/EBP-β
T18448 16-31 Phosphorylation denotes phosphorylation
T18336 83-91 Protein denotes SerpinB2
T18335 35-42 Protein denotes C/EBP-β
R13212 T18448 T18450 causeOf phosphorylation,regulates
R13213 T18449 T18448 themeOf C/EBP-β,phosphorylation
R13214 T18451 T18450 themeOf induced,regulates