PMC:3589482 / 44998-45156 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T21931","span":{"begin":157,"end":158},"obj":"."},{"id":"T21930","span":{"begin":148,"end":157},"obj":"JJ"},{"id":"T21929","span":{"begin":145,"end":147},"obj":"IN"},{"id":"T21928","span":{"begin":140,"end":144},"obj":"DT"},{"id":"T21927","span":{"begin":135,"end":139},"obj":"IN"},{"id":"T21926","span":{"begin":123,"end":134},"obj":"RB"},{"id":"T21925","span":{"begin":114,"end":122},"obj":"NN"},{"id":"T21924","span":{"begin":105,"end":113},"obj":"NN"},{"id":"T21923","span":{"begin":96,"end":104},"obj":"JJ"},{"id":"T21922","span":{"begin":89,"end":95},"obj":"VB"},{"id":"T21921","span":{"begin":85,"end":88},"obj":"RB"},{"id":"T21920","span":{"begin":81,"end":84},"obj":"VBD"},{"id":"T21919","span":{"begin":79,"end":80},"obj":","},{"id":"T21918","span":{"begin":73,"end":79},"obj":"NNP"},{"id":"T21917","span":{"begin":72,"end":73},"obj":":"},{"id":"T21916","span":{"begin":67,"end":72},"obj":"NNP"},{"id":"T21915","span":{"begin":65,"end":66},"obj":","},{"id":"T21914","span":{"begin":59,"end":65},"obj":"JJ"},{"id":"T21913","span":{"begin":54,"end":58},"obj":"NN"},{"id":"T21912","span":{"begin":37,"end":53},"obj":"NN"},{"id":"T21911","span":{"begin":35,"end":36},"obj":"NN"},{"id":"T21910","span":{"begin":34,"end":35},"obj":":"},{"id":"T21909","span":{"begin":29,"end":34},"obj":"NNP"},{"id":"T21908","span":{"begin":25,"end":28},"obj":"DT"},{"id":"T21907","span":{"begin":22,"end":24},"obj":"IN"},{"id":"T21906","span":{"begin":11,"end":21},"obj":"NN"},{"id":"T21905","span":{"begin":9,"end":10},"obj":","},{"id":"T21904","span":{"begin":0,"end":9},"obj":"RB"}],"relations":[{"id":"R15753","pred":"advmod","subj":"T21904","obj":"T21922"},{"id":"R15754","pred":"punct","subj":"T21905","obj":"T21906"},{"id":"R15757","pred":"nsubj","subj":"T21906","obj":"T21922"},{"id":"R15758","pred":"prep","subj":"T21907","obj":"T21906"},{"id":"R15760","pred":"det","subj":"T21908","obj":"T21913"},{"id":"R15761","pred":"nmod","subj":"T21909","obj":"T21913"},{"id":"R15763","pred":"punct","subj":"T21910","obj":"T21911"},{"id":"R15764","pred":"nmod","subj":"T21911","obj":"T21913"},{"id":"R15765","pred":"compound","subj":"T21912","obj":"T21913"},{"id":"R15766","pred":"pobj","subj":"T21913","obj":"T21907"},{"id":"R15768","pred":"nsubj","subj":"T21914","obj":"T21922"},{"id":"R15770","pred":"punct","subj":"T21915","obj":"T21914"},{"id":"R15771","pred":"compound","subj":"T21916","obj":"T21918"},{"id":"R15772","pred":"punct","subj":"T21917","obj":"T21918"},{"id":"R15774","pred":"nsubj","subj":"T21918","obj":"T21922"},{"id":"R15775","pred":"punct","subj":"T21919","obj":"T21918"},{"id":"R15776","pred":"aux","subj":"T21920","obj":"T21922"},{"id":"R15778","pred":"neg","subj":"T21921","obj":"T21922"},{"id":"R15779","pred":"ROOT","subj":"T21922","obj":"T21922"},{"id":"R15781","pred":"amod","subj":"T21923","obj":"T21925"},{"id":"R15782","pred":"compound","subj":"T21924","obj":"T21925"},{"id":"R15784","pred":"dobj","subj":"T21925","obj":"T21922"},{"id":"R15785","pred":"advmod","subj":"T21926","obj":"T21922"},{"id":"R15786","pred":"prep","subj":"T21927","obj":"T21922"},{"id":"R15788","pred":"pobj","subj":"T21928","obj":"T21927"},{"id":"R15789","pred":"prep","subj":"T21929","obj":"T21928"},{"id":"R15790","pred":"pobj","subj":"T21930","obj":"T21929"},{"id":"R15792","pred":"punct","subj":"T21931","obj":"T21922"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T19653","span":{"begin":148,"end":157},"obj":"JJ"},{"id":"T19652","span":{"begin":145,"end":147},"obj":"IN"},{"id":"T19651","span":{"begin":140,"end":144},"obj":"DT"},{"id":"T19650","span":{"begin":135,"end":139},"obj":"IN"},{"id":"T19649","span":{"begin":123,"end":134},"obj":"RB"},{"id":"T19648","span":{"begin":114,"end":122},"obj":"NN"},{"id":"T19647","span":{"begin":105,"end":113},"obj":"NN"},{"id":"T19646","span":{"begin":96,"end":104},"obj":"NN"},{"id":"T19645","span":{"begin":89,"end":95},"obj":"VB"},{"id":"T19644","span":{"begin":85,"end":88},"obj":"RB"},{"id":"T19643","span":{"begin":81,"end":84},"obj":"VB"},{"id":"T19642","span":{"begin":79,"end":80},"obj":"-COMMA-"},{"id":"T19641","span":{"begin":67,"end":79},"obj":"NN"},{"id":"T19640","span":{"begin":65,"end":66},"obj":"-COMMA-"},{"id":"T19639","span":{"begin":59,"end":65},"obj":"JJ"},{"id":"T19638","span":{"begin":54,"end":58},"obj":"NN"},{"id":"T19637","span":{"begin":37,"end":53},"obj":"NN"},{"id":"T19636","span":{"begin":29,"end":36},"obj":"NN"},{"id":"T19635","span":{"begin":25,"end":28},"obj":"DT"},{"id":"T19634","span":{"begin":22,"end":24},"obj":"IN"},{"id":"T19633","span":{"begin":11,"end":21},"obj":"NN"},{"id":"T19632","span":{"begin":9,"end":10},"obj":"-COMMA-"},{"id":"T19631","span":{"begin":0,"end":9},"obj":"RB"}],"relations":[{"id":"R14123","pred":"arg1Of","subj":"T19633","obj":"T19634"},{"id":"R14124","pred":"arg1Of","subj":"T19633","obj":"T19643"},{"id":"R14125","pred":"arg1Of","subj":"T19633","obj":"T19645"},{"id":"R14126","pred":"arg2Of","subj":"T19638","obj":"T19634"},{"id":"R14127","pred":"arg1Of","subj":"T19638","obj":"T19635"},{"id":"R14128","pred":"arg1Of","subj":"T19638","obj":"T19636"},{"id":"R14129","pred":"arg1Of","subj":"T19638","obj":"T19637"},{"id":"R14130","pred":"arg1Of","subj":"T19638","obj":"T19639"},{"id":"R14131","pred":"arg1Of","subj":"T19638","obj":"T19640"},{"id":"R14132","pred":"arg2Of","subj":"T19641","obj":"T19640"},{"id":"R14133","pred":"arg1Of","subj":"T19645","obj":"T19631"},{"id":"R14134","pred":"arg1Of","subj":"T19645","obj":"T19632"},{"id":"R14135","pred":"arg1Of","subj":"T19645","obj":"T19642"},{"id":"R14136","pred":"arg2Of","subj":"T19645","obj":"T19643"},{"id":"R14137","pred":"arg1Of","subj":"T19645","obj":"T19644"},{"id":"R14138","pred":"arg1Of","subj":"T19645","obj":"T19649"},{"id":"R14139","pred":"arg1Of","subj":"T19645","obj":"T19650"},{"id":"R14140","pred":"arg2Of","subj":"T19648","obj":"T19645"},{"id":"R14141","pred":"arg1Of","subj":"T19648","obj":"T19646"},{"id":"R14142","pred":"arg1Of","subj":"T19648","obj":"T19647"},{"id":"R14143","pred":"arg2Of","subj":"T19651","obj":"T19650"},{"id":"R14144","pred":"arg1Of","subj":"T19651","obj":"T19652"},{"id":"R14145","pred":"arg2Of","subj":"T19653","obj":"T19652"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T18767","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T18766","span":{"begin":67,"end":79},"obj":"Protein"},{"id":"T18765","span":{"begin":29,"end":65},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T20263","span":{"begin":29,"end":36},"obj":"http://www.uniprot.org/uniprot/P28033"},{"id":"T20232","span":{"begin":96,"end":104},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    sentences

    {"project":"sentences","denotations":[{"id":"T18503","span":{"begin":0,"end":158},"obj":"Sentence"},{"id":"T268","span":{"begin":0,"end":158},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    simple1

    {"project":"simple1","denotations":[{"id":"T18904","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T18903","span":{"begin":67,"end":79},"obj":"Protein"},{"id":"T18902","span":{"begin":29,"end":65},"obj":"Protein"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T20185","span":{"begin":11,"end":21},"obj":"Gene_expression"},{"id":"T20112","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T20111","span":{"begin":67,"end":79},"obj":"Protein"},{"id":"T20110","span":{"begin":29,"end":65},"obj":"Protein"},{"id":"T20184","span":{"begin":89,"end":95},"obj":"Regulation"}],"relations":[{"id":"R14554","pred":"themeOf","subj":"T20110","obj":"T20185"},{"id":"R14555","pred":"themeOf","subj":"T20111","obj":"T20185"},{"id":"R14556","pred":"themeOf","subj":"T20112","obj":"T20184"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T20625","span":{"begin":89,"end":95},"obj":"Regulation"},{"id":"T20624","span":{"begin":11,"end":21},"obj":"Gene_expression"},{"id":"T20562","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T20561","span":{"begin":67,"end":79},"obj":"Protein"},{"id":"T20560","span":{"begin":29,"end":65},"obj":"Protein"}],"relations":[{"id":"R14767","pred":"themeOf","subj":"T20560","obj":"T20624"},{"id":"R14768","pred":"themeOf","subj":"T20561","obj":"T20624"},{"id":"R14794","pred":"themeOf","subj":"T20624","obj":"T20625"},{"id":"R14795","pred":"themeOf","subj":"T20624","obj":"T20625"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T20403","span":{"begin":11,"end":21},"obj":"Gene_expression"},{"id":"T20336","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T20335","span":{"begin":67,"end":79},"obj":"Protein"},{"id":"T20334","span":{"begin":29,"end":65},"obj":"Protein"}],"relations":[{"id":"R14649","pred":"themeOf","subj":"T20334","obj":"T20403"},{"id":"R14650","pred":"themeOf","subj":"T20335","obj":"T20403"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T21101","span":{"begin":11,"end":80},"obj":"Gene_expression"},{"id":"T21082","span":{"begin":11,"end":134},"obj":"Regulation"},{"id":"T21046","span":{"begin":96,"end":113},"obj":"Entity"},{"id":"T21019","span":{"begin":67,"end":79},"obj":"Protein"},{"id":"T20996","span":{"begin":22,"end":65},"obj":"Protein"},{"id":"T20992","span":{"begin":96,"end":104},"obj":"Protein"}],"relations":[{"id":"R14954","pred":"themeOf","subj":"T20996","obj":"T21101"},{"id":"R14978","pred":"causeOf","subj":"T21101","obj":"T21082"}],"attributes":[{"id":"M51","pred":"Negation","subj":"T21082","obj":"true"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T20736","span":{"begin":89,"end":95},"obj":"Regulation"},{"id":"T20735","span":{"begin":89,"end":95},"obj":"Regulation"},{"id":"T20734","span":{"begin":11,"end":21},"obj":"Gene_expression"},{"id":"T20733","span":{"begin":11,"end":21},"obj":"Gene_expression"},{"id":"T20732","span":{"begin":96,"end":113},"obj":"Protein"},{"id":"T20731","span":{"begin":67,"end":79},"obj":"Protein"},{"id":"T20730","span":{"begin":29,"end":65},"obj":"Protein"}],"relations":[{"id":"R14847","pred":"themeOf","subj":"T20730","obj":"T20733"},{"id":"R14848","pred":"themeOf","subj":"T20731","obj":"T20734"},{"id":"R14849","pred":"themeOf","subj":"T20733","obj":"T20735"},{"id":"R14850","pred":"themeOf","subj":"T20734","obj":"T20736"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    testone

    {"project":"testone","denotations":[{"id":"T18272","span":{"begin":37,"end":44},"obj":"Phosphorylation"},{"id":"T18271","span":{"begin":11,"end":21},"obj":"Gene_expression"},{"id":"T18215","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T18214","span":{"begin":67,"end":79},"obj":"Protein"},{"id":"T18213","span":{"begin":29,"end":65},"obj":"Protein"}],"relations":[{"id":"R13136","pred":"themeOf","subj":"T18213","obj":"T18271"},{"id":"R13137","pred":"themeOf","subj":"T18214","obj":"T18271"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}

    test3

    {"project":"test3","denotations":[{"id":"T18442","span":{"begin":105,"end":113},"obj":"Entity"},{"id":"T18441","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T18440","span":{"begin":89,"end":95},"obj":"Regulation"},{"id":"T18439","span":{"begin":67,"end":79},"obj":"Protein"},{"id":"T18438","span":{"begin":29,"end":65},"obj":"Protein"},{"id":"T18437","span":{"begin":11,"end":21},"obj":"Gene_expression"},{"id":"T18332","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T18331","span":{"begin":67,"end":79},"obj":"Protein"},{"id":"T18330","span":{"begin":29,"end":65},"obj":"Protein"}],"relations":[{"id":"R13205","pred":"causeOf","subj":"T18437","obj":"T18440"},{"id":"R13206","pred":"themeOf","subj":"T18438","obj":"T18437"},{"id":"R13207","pred":"themeOf","subj":"T18439","obj":"T18437"},{"id":"R13208","pred":"partOf","subj":"T18442","obj":"T18441"}],"text":"Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type."}