> top > docs > PMC:3589482 > spans > 44226-45883 > annotations

PMC:3589482 / 44226-45883 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T22039 1573-1584 JJ denotes MLK3-driven
T22038 1568-1572 IN denotes that
T22037 1560-1567 VBP denotes suggest
T22036 1555-1559 NNS denotes data
T22035 1551-1554 PRP$ denotes Our
T22034 1549-1550 . denotes .
T22033 1548-1549 NNP denotes ]
T22032 1546-1548 CD denotes 73
T22031 1545-1546 NNP denotes [
T22030 1536-1544 NNS denotes pathways
T22029 1526-1535 VBG denotes signaling
T22028 1511-1525 JJ denotes IFNγ-regulated
T22027 1507-1510 IN denotes for
T22026 1497-1506 JJ denotes important
T22025 1493-1496 VBD denotes was
T22024 1489-1492 NNP denotes S64
T22023 1487-1488 NN denotes β
T22022 1486-1487 : denotes -
T22021 1481-1486 NNP denotes C/EBP
T22020 1478-1480 IN denotes of
T22019 1460-1477 NN denotes dephosphorylation
T22018 1453-1459 VBN denotes driven
T22017 1452-1453 : denotes -
T22016 1451-1452 -RRB- denotes )
T22015 1447-1451 CD denotes MLK3
T22014 1446-1447 -LRB- denotes (
T22013 1437-1445 JJ denotes kinase-3
T22012 1429-1436 NN denotes lineage
T22011 1423-1428 JJ denotes Mixed
T22010 1418-1422 IN denotes that
T22009 1405-1417 VBD denotes demonstrated
T22008 1394-1404 NNS denotes colleagues
T22007 1390-1393 CC denotes and
T22006 1386-1389 NNP denotes Roy
T22005 1384-1385 . denotes .
T22004 1376-1384 NN denotes activity
T22003 1367-1375 NN denotes promoter
T22002 1363-1366 PRP$ denotes its
T22001 1354-1362 VB denotes increase
T22000 1351-1353 TO denotes to
T21999 1342-1350 CD denotes SerpinB2
T21998 1339-1341 IN denotes of
T21997 1325-1338 NN denotes transcription
T21996 1313-1324 JJ denotes LPS-induced
T21995 1306-1312 IN denotes during
T21994 1300-1305 NN denotes event
T21993 1291-1299 JJ denotes critical
T21992 1289-1290 DT denotes a
T21991 1286-1288 VB denotes be
T21990 1282-1285 MD denotes may
T21989 1277-1281 NN denotes site
T21988 1272-1276 DT denotes this
T21987 1269-1271 IN denotes at
T21986 1251-1268 NN denotes dephosphorylation
T21985 1246-1250 IN denotes that
T21984 1239-1245 JJ denotes likely
T21983 1236-1238 VBZ denotes is
T21982 1233-1235 PRP denotes it
T21981 1231-1232 , denotes ,
T21980 1230-1231 NNP denotes ]
T21979 1228-1230 CD denotes 73
T21978 1227-1228 NNP denotes [
T21977 1222-1226 NNS denotes MEFs
T21976 1218-1221 CC denotes and
T21975 1212-1217 NNS denotes cells
T21974 1209-1211 CD denotes .7
T21973 1203-1209 NNP denotes RAW264
T21972 1198-1202 DT denotes both
T21971 1195-1197 IN denotes in
T21970 1180-1194 VBN denotes phosphorylated
T21969 1165-1179 RB denotes constitutively
T21968 1162-1164 VBZ denotes is
T21967 1158-1161 NNP denotes S64
T21966 1156-1157 NN denotes β
T21965 1155-1156 : denotes -
T21964 1150-1155 NNP denotes C/EBP
T21963 1144-1149 IN denotes Since
T21962 1142-1143 . denotes .
T21961 1134-1142 NN denotes activity
T21960 1125-1133 NN denotes promoter
T21959 1116-1124 CD denotes SerpinB2
T21958 1104-1115 JJ denotes LPS-induced
T21957 1094-1103 VBZ denotes regulates
T21956 1083-1093 RB denotes negatively
T21955 1079-1082 CD denotes S64
T21954 1076-1078 IN denotes at
T21953 1074-1075 NN denotes β
T21952 1073-1074 : denotes -
T21951 1068-1073 NNP denotes C/EBP
T21950 1065-1067 IN denotes of
T21949 1049-1064 NN denotes phosphorylation
T21948 1044-1048 IN denotes that
T21947 1033-1043 VBG denotes indicating
T21946 1031-1032 , denotes ,
T21945 1023-1031 NN denotes activity
T21944 1014-1022 NN denotes promoter
T21943 1005-1013 NN denotes SerpinB2
T21942 993-1004 JJ denotes LPS-induced
T21941 984-992 JJ denotes enhanced
T21940 970-983 RB denotes significantly
T21939 964-969 JJ denotes βS64A
T21938 963-964 : denotes -
T21937 958-963 NNP denotes C/EBP
T21936 955-957 IN denotes of
T21935 944-954 NN denotes expression
T21934 942-943 , denotes ,
T21933 934-942 NN denotes contrast
T21932 931-933 IN denotes In
T21931 929-930 . denotes .
T21930 920-929 JJ denotes wild-type
T21929 917-919 IN denotes of
T21928 912-916 DT denotes that
T21927 907-911 IN denotes from
T21926 895-906 RB denotes differently
T21925 886-894 NN denotes activity
T21924 877-885 NN denotes promoter
T21923 868-876 JJ denotes SerpinB2
T21922 861-867 VB denotes affect
T21921 857-860 RB denotes not
T21920 853-856 VBD denotes did
T21919 851-852 , denotes ,
T21918 845-851 NNP denotes βT188A
T21917 844-845 : denotes -
T21916 839-844 NNP denotes C/EBP
T21915 837-838 , denotes ,
T21914 831-837 JJ denotes mutant
T21913 826-830 NN denotes site
T21912 809-825 NN denotes phospho-acceptor
T21911 807-808 NN denotes β
T21910 806-807 : denotes -
T21909 801-806 NNP denotes C/EBP
T21908 797-800 DT denotes the
T21907 794-796 IN denotes of
T21906 783-793 NN denotes expression
T21905 781-782 , denotes ,
T21904 772-781 RB denotes Similarly
T21903 770-771 . denotes .
T21902 760-770 NN denotes expression
T21901 755-759 NN denotes gene
T21900 746-754 NNP denotes SerpinB2
T21899 743-745 IN denotes of
T21898 732-742 NN denotes regulation
T21897 728-731 DT denotes the
T21896 724-727 IN denotes for
T21895 714-723 JJ denotes important
T21894 710-713 RB denotes not
T21893 707-709 VBZ denotes is
T21892 702-706 NN denotes site
T21891 685-701 NN denotes phospho-acceptor
T21890 680-684 NNP denotes T217
T21889 676-679 DT denotes the
T21888 671-675 IN denotes that
T21887 662-670 VBP denotes indicate
T21886 657-661 NNS denotes data
T21885 651-656 DT denotes These
T21884 649-650 . denotes .
T21883 644-649 NNS denotes cells
T21882 641-643 CD denotes .7
T21881 635-641 NNP denotes RAW264
T21880 632-634 IN denotes of
T21879 620-631 NN denotes stimulation
T21878 616-619 NNP denotes LPS
T21877 606-615 VBG denotes following
T21876 597-605 VB denotes decrease
T21875 594-596 TO denotes to
T21874 585-593 VBN denotes observed
T21873 581-584 VBD denotes was
T21872 572-580 NN denotes promoter
T21871 563-571 NNP denotes SerpinB2
T21870 559-562 DT denotes the
T21869 556-558 TO denotes to
T21868 550-555 NNP denotes βT217
T21867 549-550 : denotes -
T21866 544-549 NNP denotes C/EBP
T21865 541-543 IN denotes of
T21864 529-540 NN denotes recruitment
T21863 522-528 IN denotes though
T21862 517-521 RB denotes even
T21861 515-516 , denotes ,
T21860 514-515 NN denotes β
T21859 513-514 : denotes -
T21858 508-513 NNP denotes C/EBP
T21857 498-507 JJ denotes wild-type
T21856 495-497 IN denotes of
T21855 490-494 DT denotes that
T21854 485-489 IN denotes over
T21853 476-484 NN denotes activity
T21852 467-475 NN denotes promoter
T21851 458-466 JJ denotes proximal
T21850 449-457 NNP denotes SerpinB2
T21849 440-448 VB denotes increase
T21848 436-439 RB denotes not
T21847 432-435 VBD denotes did
T21846 427-431 NNS denotes MEFs
T21845 425-426 CD denotes −
T21844 424-425 VBD denotes /
T21843 423-424 NNP denotes −
T21842 418-423 NNP denotes Cebpb
T21841 415-417 IN denotes in
T21840 413-414 , denotes ,
T21839 407-413 NNP denotes βT217A
T21838 402-407 NNP denotes C/EBP
T21837 400-401 , denotes ,
T21836 394-400 JJ denotes mutant
T21835 389-393 NN denotes site
T21834 372-388 NN denotes phospho-acceptor
T21833 370-371 NN denotes β
T21832 369-370 : denotes -
T21831 364-369 NNP denotes C/EBP
T21830 362-363 DT denotes a
T21829 359-361 IN denotes of
T21828 348-358 NN denotes expression
T21827 346-347 , denotes ,
T21826 339-346 RB denotes However
T21825 337-338 . denotes .
T21824 336-337 NNP denotes ]
T22050 1656-1657 . denotes .
T22049 1648-1656 NNS denotes pathways
T22048 1634-1647 JJ denotes LPS-signaling
T22047 1631-1633 IN denotes in
T22046 1622-1630 VBN denotes involved
T22045 1619-1621 VB denotes be
T22044 1614-1618 RB denotes also
T22043 1610-1613 MD denotes may
T22042 1606-1609 CD denotes S64
T22041 1603-1605 IN denotes of
T22040 1585-1602 NN denotes dephosphorylation
T21823 334-336 CD denotes 16
T21822 333-334 NNP denotes [
T21821 324-332 NNP denotes SerpinB2
T21820 321-323 TO denotes to
T21819 310-320 VBN denotes attributed
T21818 305-309 VBN denotes been
T21817 300-304 RB denotes also
T21816 296-299 VBZ denotes has
T21815 291-295 WDT denotes that
T21814 282-290 NN denotes activity
T21813 279-281 DT denotes an
T21812 277-278 , denotes ,
T21811 276-277 NNP denotes ]
T21810 274-276 CD denotes 65
T21809 273-274 NNP denotes [
T21808 271-272 -RRB- denotes )
T21807 269-271 NNP denotes LT
T21806 268-269 -LRB- denotes (
T21805 262-267 NN denotes toxin
T21804 255-261 JJ denotes lethal
T21803 245-254 NNS denotes anthracis
T21802 236-244 NN denotes Bacillus
T21801 233-235 IN denotes by
T21800 225-232 VBN denotes induced
T21799 215-224 NN denotes apoptosis
T21798 210-214 IN denotes from
T21797 198-209 NNS denotes macrophages
T21796 191-197 VB denotes rescue
T21795 188-190 TO denotes to
T21794 179-187 VBN denotes reported
T21793 174-178 VBN denotes been
T21792 170-173 VBZ denotes has
T21791 165-169 NNP denotes T217
T21790 162-164 IN denotes on
T21789 147-161 VBN denotes phosphorylated
T21788 145-146 NN denotes β
T21787 144-145 : denotes -
T21786 139-144 SYM denotes C/EBP
T21785 137-138 . denotes .
T21784 135-136 : denotes ;
T21783 134-135 NNP denotes ]
T21782 132-134 CD denotes 63
T21781 131-132 NNP denotes [
T21780 125-130 NNS denotes genes
T21779 118-124 NN denotes target
T21778 114-117 PRP$ denotes its
T21777 111-113 IN denotes of
T21776 95-110 NN denotes transactivation
T21775 86-94 VB denotes modulate
T21774 83-85 TO denotes to
T21773 77-82 VBN denotes shown
T21772 72-76 VBN denotes been
T21771 68-71 VBZ denotes has
T21770 59-67 NNS denotes residues
T21769 54-58 NN denotes acid
T21768 48-53 JJ denotes amino
T21767 38-47 JJ denotes different
T21766 30-37 JJ denotes several
T21765 27-29 IN denotes at
T21764 25-26 NN denotes β
T21763 24-25 : denotes -
T21762 19-24 NNP denotes C/EBP
T21761 16-18 IN denotes of
T21760 0-15 NNP denotes Phosphorylation
R15553 T21760 T21773 nsubjpass Phosphorylation,shown
R15555 T21761 T21760 prep of,Phosphorylation
R15556 T21762 T21761 pobj C/EBP,of
R15558 T21763 T21764 punct -,β
R15559 T21764 T21760 conj β,Phosphorylation
R15561 T21765 T21764 prep at,β
R15562 T21766 T21770 amod several,residues
R15563 T21767 T21770 amod different,residues
R15565 T21768 T21769 compound amino,acid
R15566 T21769 T21770 compound acid,residues
R15568 T21770 T21765 pobj residues,at
R15569 T21771 T21773 aux has,shown
R15570 T21772 T21773 auxpass been,shown
R15572 T21773 T21773 ROOT shown,shown
R15573 T21774 T21775 aux to,modulate
R15574 T21775 T21773 xcomp modulate,shown
R15576 T21776 T21775 dobj transactivation,modulate
R15577 T21777 T21776 prep of,transactivation
R15578 T21778 T21780 poss its,genes
R15580 T21779 T21780 compound target,genes
R15581 T21780 T21777 pobj genes,of
R15583 T21781 T21783 nmod [,]
R15584 T21782 T21783 nummod 63,]
R15585 T21783 T21776 conj ],transactivation
R15587 T21784 T21773 punct ;,shown
R15588 T21785 T21773 punct .,shown
R15590 T21786 T21788 meta C/EBP,β
R15591 T21787 T21788 punct -,β
R15592 T21788 T21789 compound β,phosphorylated
R15593 T21789 T21794 nsubjpass phosphorylated,reported
R15594 T21790 T21789 prep on,phosphorylated
R15595 T21791 T21790 pobj T217,on
R15597 T21792 T21794 aux has,reported
R15598 T21793 T21794 auxpass been,reported
R15599 T21794 T21794 ROOT reported,reported
R15600 T21795 T21796 aux to,rescue
R15602 T21796 T21794 xcomp rescue,reported
R15603 T21797 T21796 dobj macrophages,rescue
R15605 T21798 T21796 prep from,rescue
R15606 T21799 T21798 pobj apoptosis,from
R15609 T21800 T21794 conj induced,reported
R15610 T21801 T21800 agent by,induced
R15612 T21802 T21803 compound Bacillus,anthracis
R15613 T21803 T21801 pobj anthracis,by
R15615 T21804 T21805 amod lethal,toxin
R15616 T21805 T21803 appos toxin,anthracis
R15617 T21806 T21807 punct (,LT
R15619 T21807 T21805 appos LT,toxin
R15620 T21808 T21794 punct ),reported
R15621 T21809 T21811 nmod [,]
R15623 T21810 T21811 nummod 65,]
R15624 T21811 T21811 ROOT ],]
R15625 T21812 T21811 punct ",",]
R15627 T21813 T21814 det an,activity
R15628 T21814 T21811 appos activity,]
R15629 T21815 T21819 nsubj that,attributed
R15631 T21816 T21819 aux has,attributed
R15632 T21817 T21819 advmod also,attributed
R15634 T21818 T21819 auxpass been,attributed
R15635 T21819 T21814 relcl attributed,activity
R15636 T21820 T21819 prep to,attributed
R15638 T21821 T21822 compound SerpinB2,[
R15639 T21822 T21820 pobj [,to
R15640 T21823 T21824 nummod 16,]
R15642 T21824 T21822 dobj ],[
R15643 T21825 T21811 punct .,]
R15644 T21826 T21844 advmod However,/
R15645 T21827 T21844 punct ",",/
R15648 T21828 T21844 nsubj expression,/
R15649 T21829 T21828 prep of,expression
R15651 T21830 T21835 det a,site
R15652 T21831 T21835 nmod C/EBP,site
R15654 T21832 T21833 punct -,β
R15655 T21833 T21835 nmod β,site
R15657 T21834 T21835 compound phospho-acceptor,site
R15658 T21835 T21829 pobj site,of
R15659 T21836 T21835 amod mutant,site
R15661 T21837 T21839 punct ",",βT217A
R15662 T21838 T21839 compound C/EBP,βT217A
R15664 T21839 T21828 appos βT217A,expression
R15665 T21840 T21839 punct ",",βT217A
R15667 T21841 T21839 prep in,βT217A
R15668 T21842 T21843 compound Cebpb,−
R15669 T21843 T21841 pobj −,in
R15671 T21844 T21844 ROOT /,/
R15672 T21845 T21846 nummod −,MEFs
R15674 T21846 T21849 nsubj MEFs,increase
R15675 T21847 T21849 aux did,increase
R15676 T21848 T21849 neg not,increase
R15678 T21849 T21844 ccomp increase,/
R15679 T21850 T21853 nmod SerpinB2,activity
R15681 T21851 T21853 amod proximal,activity
R15685 T21852 T21853 compound promoter,activity
R15686 T21853 T21849 dobj activity,increase
R15687 T21854 T21853 prep over,activity
R15689 T21855 T21854 pobj that,over
R15690 T21856 T21855 prep of,that
R15692 T21857 T21860 amod wild-type,β
R15693 T21858 T21860 compound C/EBP,β
R15694 T21859 T21860 punct -,β
R15695 T21860 T21856 pobj β,of
R15696 T21861 T21849 punct ",",increase
R15697 T21862 T21874 advmod even,observed
R15698 T21863 T21874 mark though,observed
R15700 T21864 T21868 nsubj recruitment,βT217
R15701 T21865 T21864 prep of,recruitment
R15703 T21866 T21865 pobj C/EBP,of
R15704 T21867 T21868 punct -,βT217
R15705 T21868 T21874 nsubjpass βT217,observed
R15707 T21869 T21868 prep to,βT217
R15708 T21870 T21872 det the,promoter
R15710 T21871 T21872 compound SerpinB2,promoter
R15711 T21872 T21869 pobj promoter,to
R15712 T21873 T21874 auxpass was,observed
R15714 T21874 T21849 advcl observed,increase
R15715 T21875 T21876 aux to,decrease
R15717 T21876 T21874 xcomp decrease,observed
R15718 T21877 T21874 prep following,observed
R15720 T21878 T21879 compound LPS,stimulation
R15721 T21879 T21877 pobj stimulation,following
R15722 T21880 T21879 prep of,stimulation
R15723 T21881 T21883 nmod RAW264,cells
R15725 T21882 T21883 nummod .7,cells
R15726 T21883 T21880 pobj cells,of
R15727 T21884 T21844 punct .,/
R15729 T21885 T21886 det These,data
R15730 T21886 T21887 nsubj data,indicate
R15731 T21887 T21887 ROOT indicate,indicate
R15732 T21888 T21893 mark that,is
R15734 T21889 T21892 det the,site
R15735 T21890 T21892 compound T217,site
R15737 T21891 T21892 compound phospho-acceptor,site
R15738 T21892 T21893 nsubj site,is
R15739 T21893 T21887 ccomp is,indicate
R15740 T21894 T21893 neg not,is
R15742 T21895 T21893 acomp important,is
R15743 T21896 T21895 prep for,important
R15744 T21897 T21898 det the,regulation
R15745 T21898 T21896 pobj regulation,for
R15746 T21899 T21898 prep of,regulation
R15748 T21900 T21902 compound SerpinB2,expression
R15749 T21901 T21902 compound gene,expression
R15750 T21902 T21899 pobj expression,of
R15752 T21903 T21887 punct .,indicate
R15753 T21904 T21922 advmod Similarly,affect
R15754 T21905 T21906 punct ",",expression
R15757 T21906 T21922 nsubj expression,affect
R15758 T21907 T21906 prep of,expression
R15760 T21908 T21913 det the,site
R15761 T21909 T21913 nmod C/EBP,site
R15763 T21910 T21911 punct -,β
R15764 T21911 T21913 nmod β,site
R15765 T21912 T21913 compound phospho-acceptor,site
R15766 T21913 T21907 pobj site,of
R15768 T21914 T21922 nsubj mutant,affect
R15770 T21915 T21914 punct ",",mutant
R15771 T21916 T21918 compound C/EBP,βT188A
R15772 T21917 T21918 punct -,βT188A
R15774 T21918 T21922 nsubj βT188A,affect
R15775 T21919 T21918 punct ",",βT188A
R15776 T21920 T21922 aux did,affect
R15778 T21921 T21922 neg not,affect
R15779 T21922 T21922 ROOT affect,affect
R15781 T21923 T21925 amod SerpinB2,activity
R15782 T21924 T21925 compound promoter,activity
R15784 T21925 T21922 dobj activity,affect
R15785 T21926 T21922 advmod differently,affect
R15786 T21927 T21922 prep from,affect
R15788 T21928 T21927 pobj that,from
R15789 T21929 T21928 prep of,that
R15790 T21930 T21929 pobj wild-type,of
R15792 T21931 T21922 punct .,affect
R15793 T21932 T21947 prep In,indicating
R15794 T21933 T21932 pobj contrast,In
R15795 T21934 T21945 punct ",",activity
R15796 T21935 T21945 nmod expression,activity
R15797 T21949 T21957 nsubj phosphorylation,regulates
R15798 T21936 T21935 prep of,expression
R15799 T21937 T21936 pobj C/EBP,of
R15800 T21938 T21939 punct -,βS64A
R15801 T21939 T21945 amod βS64A,activity
R15802 T21950 T21949 prep of,phosphorylation
R15803 T21940 T21941 advmod significantly,enhanced
R15804 T21941 T21945 amod enhanced,activity
R15805 T21942 T21945 amod LPS-induced,activity
R15806 T21943 T21945 compound SerpinB2,activity
R15807 T21951 T21950 pobj C/EBP,of
R15808 T21944 T21945 compound promoter,activity
R15809 T21945 T21947 nsubj activity,indicating
R15810 T21952 T21953 punct -,β
R15811 T21946 T21947 punct ",",indicating
R15812 T21947 T21947 ROOT indicating,indicating
R15813 T21948 T21957 mark that,regulates
R15814 T21953 T21949 conj β,phosphorylation
R15815 T21954 T21949 prep at,phosphorylation
R15816 T21955 T21954 pobj S64,at
R15817 T22046 T22045 acomp involved,be
R15818 T22047 T22046 prep in,involved
R15819 T21956 T21957 advmod negatively,regulates
R15820 T22048 T22049 amod LPS-signaling,pathways
R15821 T22049 T22047 pobj pathways,in
R15822 T21957 T21947 ccomp regulates,indicating
R15823 T22050 T22037 punct .,suggest
R15825 T21958 T21961 amod LPS-induced,activity
R15829 T21959 T21961 nummod SerpinB2,activity
R15832 T21960 T21961 compound promoter,activity
R15836 T21961 T21957 dobj activity,regulates
R15839 T21962 T21947 punct .,indicating
R15841 T21963 T21970 mark Since,phosphorylated
R15845 T21964 T21966 compound C/EBP,β
R15849 T21965 T21966 punct -,β
R15853 T21966 T21967 compound β,S64
R15856 T21967 T21970 nsubjpass S64,phosphorylated
R15859 T21968 T21970 auxpass is,phosphorylated
R15862 T21969 T21970 advmod constitutively,phosphorylated
R15863 T21970 T21970 ROOT phosphorylated,phosphorylated
R15864 T21971 T21970 prep in,phosphorylated
R15866 T21972 T21975 det both,cells
R15869 T21973 T21975 nmod RAW264,cells
R15873 T21974 T21975 nummod .7,cells
R15876 T21975 T21971 pobj cells,in
R15880 T21976 T21975 cc and,cells
R15883 T21977 T21975 conj MEFs,cells
R15886 T21978 T21980 nmod [,]
R15889 T21979 T21980 nummod 73,]
R15893 T21980 T21983 npadvmod ],is
R15898 T21981 T21983 punct ",",is
R15899 T21982 T21983 nsubj it,is
R15901 T21983 T21983 ROOT is,is
R15904 T21984 T21983 acomp likely,is
R15908 T21985 T21991 mark that,be
R15911 T21986 T21991 nsubj dephosphorylation,be
R15915 T21987 T21986 prep at,dephosphorylation
R15916 T21988 T21989 det this,site
R15919 T21989 T21987 pobj site,at
R15923 T21990 T21991 aux may,be
R15926 T21991 T21984 ccomp be,likely
R15930 T21992 T21994 det a,event
R15934 T21993 T21994 amod critical,event
R15938 T21994 T21991 attr event,be
R15941 T21995 T21994 prep during,event
R15948 T21996 T21997 amod LPS-induced,transcription
R15952 T21997 T21995 pobj transcription,during
R15955 T21998 T21997 prep of,transcription
R15958 T21999 T21998 pobj SerpinB2,of
R15959 T22000 T22001 aux to,increase
R15960 T22001 T21994 acl increase,event
R15962 T22002 T22004 poss its,activity
R15966 T22003 T22004 compound promoter,activity
R15969 T22004 T22001 dobj activity,increase
R15972 T22005 T21983 punct .,is
R15975 T22006 T22009 nsubj Roy,demonstrated
R15979 T22007 T22006 cc and,Roy
R15982 T22008 T22006 conj colleagues,Roy
R15987 T22009 T22009 ROOT demonstrated,demonstrated
R15990 T22010 T22025 mark that,was
R15994 T22011 T22012 amod Mixed,lineage
R16000 T22012 T22018 npadvmod lineage,driven
R16003 T22013 T22012 amod kinase-3,lineage
R16004 T22014 T22013 punct (,kinase-3
R16006 T22015 T22013 appos MLK3,kinase-3
R16010 T22016 T22013 punct ),kinase-3
R16013 T22017 T22018 punct -,driven
R16017 T22018 T22019 amod driven,dephosphorylation
R16020 T22019 T22025 nsubj dephosphorylation,was
R16024 T22020 T22019 prep of,dephosphorylation
R16027 T22021 T22020 pobj C/EBP,of
R16031 T22022 T22023 punct -,β
R16035 T22023 T22024 compound β,S64
R16038 T22024 T22019 appos S64,dephosphorylation
R16042 T22025 T22009 ccomp was,demonstrated
R16048 T22026 T22025 acomp important,was
R16053 T22027 T22026 prep for,important
R16056 T22028 T22030 amod IFNγ-regulated,pathways
R16060 T22029 T22030 compound signaling,pathways
R16064 T22030 T22027 pobj pathways,for
R16066 T22031 T22033 nmod [,]
R16068 T22032 T22033 nummod 73,]
R16070 T22033 T22030 appos ],pathways
R16073 T22034 T22009 punct .,demonstrated
R16076 T22035 T22036 poss Our,data
R16079 T22036 T22037 nsubj data,suggest
R16082 T22037 T22037 ROOT suggest,suggest
R16086 T22038 T22045 mark that,be
R16090 T22039 T22040 amod MLK3-driven,dephosphorylation
R16093 T22040 T22045 nsubj dephosphorylation,be
R16097 T22041 T22040 prep of,dephosphorylation
R16098 T22042 T22041 pobj S64,of
R16099 T22043 T22045 aux may,be
R16104 T22044 T22045 advmod also,be
R16108 T22045 T22037 ccomp be,suggest

2_test

Id Subject Object Predicate Lexical cue
23472114-21257317-87899192 132-134 21257317 denotes 63
23472114-17855774-87899193 274-276 17855774 denotes 65
T94337 132-134 21257317 denotes 63
T63905 274-276 17855774 denotes 65

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19758 1648-1656 NN denotes pathways
T19757 1634-1647 JJ denotes LPS-signaling
T19756 1631-1633 IN denotes in
T19755 1622-1630 VB denotes involved
T19754 1619-1621 VB denotes be
T19753 1614-1618 RB denotes also
T19752 1610-1613 MD denotes may
T19751 1606-1609 NN denotes S64
T19750 1603-1605 IN denotes of
T19749 1585-1602 NN denotes dephosphorylation
T19748 1573-1584 JJ denotes MLK3-driven
T19747 1568-1572 IN denotes that
T19746 1560-1567 VB denotes suggest
T19745 1555-1559 NN denotes data
T19744 1551-1554 PRP-DOLLAR- denotes Our
T19743 1548-1549 -RRB- denotes ]
T19742 1546-1548 CD denotes 73
T19741 1545-1546 -LRB- denotes [
T19740 1536-1544 NN denotes pathways
T19739 1526-1535 NN denotes signaling
T19738 1511-1525 JJ denotes IFNγ-regulated
T19737 1507-1510 IN denotes for
T19736 1497-1506 JJ denotes important
T19735 1493-1496 VB denotes was
T19734 1489-1492 NN denotes S64
T19733 1481-1488 NN denotes C/EBP-β
T19732 1478-1480 IN denotes of
T19731 1460-1477 NN denotes dephosphorylation
T19730 1452-1459 JJ denotes -driven
T19729 1451-1452 -RRB- denotes )
T19728 1447-1451 NN denotes MLK3
T19727 1446-1447 -LRB- denotes (
T19726 1437-1445 NN denotes kinase-3
T19725 1429-1436 NN denotes lineage
T19724 1423-1428 JJ denotes Mixed
T19723 1418-1422 IN denotes that
T19722 1405-1417 VB denotes demonstrated
T19721 1394-1404 NN denotes colleagues
T19720 1390-1393 CC denotes and
T19719 1386-1389 NNP denotes Roy
T19718 1376-1384 NN denotes activity
T19717 1367-1375 NN denotes promoter
T19716 1363-1366 PRP-DOLLAR- denotes its
T19715 1354-1362 VB denotes increase
T19714 1351-1353 TO denotes to
T19713 1342-1350 NN denotes SerpinB2
T19712 1339-1341 IN denotes of
T19711 1325-1338 NN denotes transcription
T19710 1313-1324 JJ denotes LPS-induced
T19709 1306-1312 IN denotes during
T19708 1300-1305 NN denotes event
T19707 1291-1299 JJ denotes critical
T19706 1289-1290 DT denotes a
T19705 1286-1288 VB denotes be
T19704 1282-1285 MD denotes may
T19703 1277-1281 NN denotes site
T19702 1272-1276 DT denotes this
T19701 1269-1271 IN denotes at
T19700 1251-1268 NN denotes dephosphorylation
T19699 1246-1250 IN denotes that
T19698 1239-1245 JJ denotes likely
T19697 1236-1238 VB denotes is
T19696 1233-1235 PRP denotes it
T19695 1231-1232 -COMMA- denotes ,
T19694 1230-1231 -RRB- denotes ]
T19693 1228-1230 CD denotes 73
T19692 1227-1228 -LRB- denotes [
T19691 1222-1226 NN denotes MEFs
T19690 1218-1221 CC denotes and
T19689 1212-1217 NN denotes cells
T19688 1203-1211 NN denotes RAW264.7
T19687 1198-1202 CC denotes both
T19686 1195-1197 IN denotes in
T19685 1180-1194 VB denotes phosphorylated
T19684 1165-1179 RB denotes constitutively
T19683 1162-1164 VB denotes is
T19682 1158-1161 NN denotes S64
T19681 1150-1157 NN denotes C/EBP-β
T19680 1144-1149 IN denotes Since
T19679 1134-1142 NN denotes activity
T19678 1125-1133 NN denotes promoter
T19677 1116-1124 NN denotes SerpinB2
T19676 1104-1115 JJ denotes LPS-induced
T19675 1094-1103 VB denotes regulates
T19674 1083-1093 RB denotes negatively
T19673 1079-1082 NN denotes S64
T19672 1076-1078 IN denotes at
T19671 1068-1075 NN denotes C/EBP-β
T19670 1065-1067 IN denotes of
T19669 1049-1064 NN denotes phosphorylation
T19668 1044-1048 IN denotes that
T19667 1033-1043 VB denotes indicating
T19666 1031-1032 -COMMA- denotes ,
T19665 1023-1031 NN denotes activity
T19664 1014-1022 NN denotes promoter
T19663 1005-1013 NN denotes SerpinB2
T19662 993-1004 JJ denotes LPS-induced
T19661 984-992 VB denotes enhanced
T19660 970-983 RB denotes significantly
T19659 958-969 NN denotes C/EBP-βS64A
T19658 955-957 IN denotes of
T19657 944-954 NN denotes expression
T19656 942-943 -COMMA- denotes ,
T19655 934-942 NN denotes contrast
T19654 931-933 IN denotes In
T19653 920-929 JJ denotes wild-type
T19652 917-919 IN denotes of
T19651 912-916 DT denotes that
T19650 907-911 IN denotes from
T19649 895-906 RB denotes differently
T19648 886-894 NN denotes activity
T19647 877-885 NN denotes promoter
T19646 868-876 NN denotes SerpinB2
T19645 861-867 VB denotes affect
T19644 857-860 RB denotes not
T19643 853-856 VB denotes did
T19642 851-852 -COMMA- denotes ,
T19641 839-851 NN denotes C/EBP-βT188A
T19640 837-838 -COMMA- denotes ,
T19639 831-837 JJ denotes mutant
T19638 826-830 NN denotes site
T19637 809-825 NN denotes phospho-acceptor
T19636 801-808 NN denotes C/EBP-β
T19635 797-800 DT denotes the
T19634 794-796 IN denotes of
T19633 783-793 NN denotes expression
T19632 781-782 -COMMA- denotes ,
T19631 772-781 RB denotes Similarly
T19630 760-770 NN denotes expression
T19629 755-759 NN denotes gene
T19628 746-754 NN denotes SerpinB2
T19627 743-745 IN denotes of
T19626 732-742 NN denotes regulation
T19625 728-731 DT denotes the
T19624 724-727 IN denotes for
T19623 714-723 JJ denotes important
T19622 710-713 RB denotes not
T19621 707-709 VB denotes is
T19620 702-706 NN denotes site
T19619 685-701 NN denotes phospho-acceptor
T19618 680-684 NN denotes T217
T19617 676-679 DT denotes the
T19616 671-675 IN denotes that
T19615 662-670 VB denotes indicate
T19614 657-661 NN denotes data
T19613 651-656 DT denotes These
T19612 644-649 NN denotes cells
T19611 635-643 NN denotes RAW264.7
T19610 632-634 IN denotes of
T19609 620-631 NN denotes stimulation
T19608 616-619 NN denotes LPS
T19607 606-615 VB denotes following
T19606 597-605 VB denotes decrease
T19605 594-596 TO denotes to
T19604 585-593 VB denotes observed
T19603 581-584 VB denotes was
T19602 572-580 NN denotes promoter
T19601 563-571 NN denotes SerpinB2
T19600 559-562 DT denotes the
T19599 556-558 TO denotes to
T19598 544-555 NN denotes C/EBP-βT217
T19597 541-543 IN denotes of
T19596 529-540 NN denotes recruitment
T19595 522-528 IN denotes though
T19594 517-521 RB denotes even
T19593 515-516 -COMMA- denotes ,
T19592 508-515 NN denotes C/EBP-β
T19591 498-507 JJ denotes wild-type
T19590 495-497 IN denotes of
T19589 490-494 DT denotes that
T19588 485-489 IN denotes over
T19587 476-484 NN denotes activity
T19586 467-475 NN denotes promoter
T19585 458-466 JJ denotes proximal
T19584 449-457 NN denotes SerpinB2
T19583 440-448 VB denotes increase
T19582 436-439 RB denotes not
T19581 432-435 VB denotes did
T19580 427-431 NN denotes MEFs
T19579 418-426 NNP denotes Cebpb−/−
T19578 415-417 IN denotes in
T19577 413-414 -COMMA- denotes ,
T19576 402-413 NN denotes C/EBPβT217A
T19575 400-401 -COMMA- denotes ,
T19574 394-400 JJ denotes mutant
T19573 389-393 NN denotes site
T19572 372-388 NN denotes phospho-acceptor
T19571 364-371 JJ denotes C/EBP-β
T19570 362-363 DT denotes a
T19569 359-361 IN denotes of
T19568 348-358 NN denotes expression
T19567 346-347 -COMMA- denotes ,
T19566 339-346 RB denotes However
T19565 336-337 -RRB- denotes ]
T19564 334-336 CD denotes 16
T19563 333-334 -LRB- denotes [
T19562 324-332 NN denotes SerpinB2
T19561 321-323 TO denotes to
T19560 310-320 VB denotes attributed
T19559 305-309 VB denotes been
T19558 300-304 RB denotes also
T19557 296-299 VB denotes has
T19556 291-295 WDT denotes that
T19555 282-290 NN denotes activity
T19546 262-267 NN denotes toxin
T19545 255-261 JJ denotes lethal
T19544 245-254 NN denotes anthracis
T19543 236-244 NN denotes Bacillus
T19542 233-235 IN denotes by
T19541 225-232 VB denotes induced
T19540 215-224 NN denotes apoptosis
T19539 210-214 IN denotes from
T19538 198-209 NN denotes macrophages
T19537 191-197 VB denotes rescue
T19536 188-190 TO denotes to
T19535 179-187 VB denotes reported
T19534 174-178 VB denotes been
T19533 170-173 VB denotes has
T19532 165-169 NN denotes T217
T19531 162-164 IN denotes on
T19530 147-161 VB denotes phosphorylated
T19529 139-146 NN denotes C/EBP-β
T19528 135-136 -COLON- denotes ;
T19527 134-135 -RRB- denotes ]
T19526 132-134 CD denotes 63
T19525 131-132 -LRB- denotes [
T19524 125-130 NN denotes genes
T19523 118-124 NN denotes target
T19522 114-117 PRP-DOLLAR- denotes its
T19521 111-113 IN denotes of
T19520 95-110 NN denotes transactivation
T19519 86-94 VB denotes modulate
T19518 83-85 TO denotes to
T19517 77-82 VB denotes shown
T19516 72-76 VB denotes been
T19515 68-71 VB denotes has
T19514 59-67 NN denotes residues
T19513 54-58 NN denotes acid
T19512 48-53 NN denotes amino
T19511 38-47 JJ denotes different
T19510 30-37 JJ denotes several
T19509 27-29 IN denotes at
T19508 19-26 NN denotes C/EBP-β
T19507 16-18 IN denotes of
T19506 0-15 NN denotes Phosphorylation
T19554 279-281 DT denotes an
T19553 277-278 -COMMA- denotes ,
T19552 276-277 -RRB- denotes ]
T19551 274-276 CD denotes 65
T19550 273-274 -LRB- denotes [
T19549 271-272 -RRB- denotes )
T19548 269-271 NN denotes LT
T19547 268-269 -LRB- denotes (
R13990 T19506 T19507 arg1Of Phosphorylation,of
R13991 T19506 T19509 arg1Of Phosphorylation,at
R13992 T19506 T19515 arg1Of Phosphorylation,has
R13993 T19506 T19516 arg1Of Phosphorylation,been
R13994 T19506 T19517 arg2Of Phosphorylation,shown
R13995 T19506 T19519 arg1Of Phosphorylation,modulate
R13996 T19508 T19507 arg2Of C/EBP-β,of
R13997 T19514 T19509 arg2Of residues,at
R13998 T19514 T19510 arg1Of residues,several
R13999 T19514 T19511 arg1Of residues,different
R14000 T19514 T19512 arg1Of residues,amino
R14001 T19514 T19513 arg1Of residues,acid
R14002 T19517 T19515 arg2Of shown,has
R14003 T19517 T19516 arg2Of shown,been
R14004 T19517 T19528 arg1Of shown,;
R14005 T19519 T19517 arg3Of modulate,shown
R14006 T19519 T19518 arg1Of modulate,to
R14007 T19520 T19519 arg2Of transactivation,modulate
R14008 T19520 T19521 arg1Of transactivation,of
R14009 T19524 T19521 arg2Of genes,of
R14010 T19524 T19522 arg1Of genes,its
R14011 T19524 T19523 arg1Of genes,target
R14012 T19524 T19525 arg1Of genes,[
R14013 T19526 T19525 arg2Of 63,[
R14014 T19527 T19525 arg3Of ],[
R14015 T19529 T19530 arg2Of C/EBP-β,phosphorylated
R14016 T19529 T19533 arg1Of C/EBP-β,has
R14017 T19529 T19534 arg1Of C/EBP-β,been
R14018 T19529 T19535 arg2Of C/EBP-β,reported
R14019 T19529 T19537 arg1Of C/EBP-β,rescue
R14020 T19530 T19531 arg1Of phosphorylated,on
R14021 T19532 T19531 arg2Of T217,on
R14022 T19535 T19533 arg2Of reported,has
R14023 T19535 T19534 arg2Of reported,been
R14024 T19537 T19535 arg3Of rescue,reported
R14025 T19537 T19536 arg1Of rescue,to
R14026 T19537 T19539 arg1Of rescue,from
R14027 T19538 T19537 arg2Of macrophages,rescue
R14028 T19540 T19539 arg2Of apoptosis,from
R14029 T19540 T19541 arg2Of apoptosis,induced
R14030 T19546 T19541 arg1Of toxin,induced
R14031 T19546 T19542 arg2Of toxin,by
R14032 T19546 T19543 arg1Of toxin,Bacillus
R14033 T19546 T19544 arg1Of toxin,anthracis
R14034 T19546 T19545 arg1Of toxin,lethal
R14035 T19546 T19547 arg1Of toxin,(
R14036 T19546 T19550 arg1Of toxin,[
R14037 T19546 T19553 arg1Of toxin,","
R14038 T19548 T19547 arg2Of LT,(
R14039 T19549 T19547 arg3Of ),(
R14040 T19551 T19550 arg2Of 65,[
R14041 T19552 T19550 arg3Of ],[
R14042 T19555 T19553 arg2Of activity,","
R14043 T19555 T19554 arg1Of activity,an
R14044 T19555 T19556 arg1Of activity,that
R14045 T19555 T19557 arg1Of activity,has
R14046 T19555 T19559 arg1Of activity,been
R14047 T19555 T19560 arg2Of activity,attributed
R14048 T19560 T19557 arg2Of attributed,has
R14049 T19560 T19558 arg1Of attributed,also
R14050 T19560 T19559 arg2Of attributed,been
R14051 T19560 T19561 arg1Of attributed,to
R14052 T19562 T19561 arg2Of SerpinB2,to
R14053 T19562 T19563 arg1Of SerpinB2,[
R14054 T19564 T19563 arg2Of 16,[
R14055 T19565 T19563 arg3Of ],[
R14056 T19568 T19569 arg1Of expression,of
R14057 T19568 T19581 arg1Of expression,did
R14058 T19568 T19583 arg1Of expression,increase
R14059 T19573 T19569 arg2Of site,of
R14060 T19573 T19570 arg1Of site,a
R14061 T19573 T19571 arg1Of site,C/EBP-β
R14062 T19573 T19572 arg1Of site,phospho-acceptor
R14063 T19573 T19574 arg1Of site,mutant
R14064 T19573 T19575 arg1Of site,","
R14065 T19576 T19575 arg2Of C/EBPβT217A,","
R14066 T19580 T19578 arg2Of MEFs,in
R14067 T19580 T19579 arg1Of MEFs,Cebpb−/−
R14068 T19583 T19566 arg1Of increase,However
R14069 T19583 T19567 arg1Of increase,","
R14070 T19583 T19577 arg1Of increase,","
R14071 T19583 T19578 arg1Of increase,in
R14072 T19583 T19581 arg2Of increase,did
R14073 T19583 T19582 arg1Of increase,not
R14074 T19583 T19588 arg1Of increase,over
R14075 T19583 T19593 arg1Of increase,","
R14076 T19583 T19595 arg1Of increase,though
R14077 T19587 T19583 arg2Of activity,increase
R14078 T19587 T19584 arg1Of activity,SerpinB2
R14079 T19587 T19585 arg1Of activity,proximal
R14080 T19587 T19586 arg1Of activity,promoter
R14081 T19589 T19588 arg2Of that,over
R14082 T19589 T19590 arg1Of that,of
R14083 T19592 T19590 arg2Of C/EBP-β,of
R14084 T19592 T19591 arg1Of C/EBP-β,wild-type
R14085 T19595 T19594 arg1Of though,even
R14086 T19596 T19597 arg1Of recruitment,of
R14087 T19596 T19599 arg1Of recruitment,to
R14088 T19596 T19603 arg1Of recruitment,was
R14089 T19596 T19604 arg2Of recruitment,observed
R14090 T19596 T19606 arg1Of recruitment,decrease
R14091 T19598 T19597 arg2Of C/EBP-βT217,of
R14092 T19602 T19599 arg2Of promoter,to
R14093 T19602 T19600 arg1Of promoter,the
R14094 T19602 T19601 arg1Of promoter,SerpinB2
R14095 T19604 T19595 arg2Of observed,though
R14096 T19604 T19603 arg2Of observed,was
R14097 T19606 T19604 arg3Of decrease,observed
R14098 T19606 T19605 arg1Of decrease,to
R14099 T19609 T19606 arg2Of stimulation,decrease
R14100 T19609 T19607 arg1Of stimulation,following
R14101 T19609 T19608 arg1Of stimulation,LPS
R14102 T19609 T19610 arg1Of stimulation,of
R14103 T19612 T19610 arg2Of cells,of
R14104 T19612 T19611 arg1Of cells,RAW264.7
R14105 T19614 T19613 arg1Of data,These
R14106 T19614 T19615 arg1Of data,indicate
R14107 T19620 T19617 arg1Of site,the
R14108 T19620 T19618 arg1Of site,T217
R14109 T19620 T19619 arg1Of site,phospho-acceptor
R14110 T19620 T19621 arg1Of site,is
R14111 T19620 T19623 arg1Of site,important
R14112 T19621 T19615 arg2Of is,indicate
R14113 T19621 T19616 arg1Of is,that
R14114 T19621 T19622 arg1Of is,not
R14115 T19623 T19621 arg2Of important,is
R14116 T19623 T19624 arg1Of important,for
R14117 T19626 T19624 arg2Of regulation,for
R14118 T19626 T19625 arg1Of regulation,the
R14119 T19626 T19627 arg1Of regulation,of
R14120 T19630 T19627 arg2Of expression,of
R14121 T19630 T19628 arg1Of expression,SerpinB2
R14122 T19630 T19629 arg1Of expression,gene
R14123 T19633 T19634 arg1Of expression,of
R14124 T19633 T19643 arg1Of expression,did
R14125 T19633 T19645 arg1Of expression,affect
R14126 T19638 T19634 arg2Of site,of
R14127 T19638 T19635 arg1Of site,the
R14128 T19638 T19636 arg1Of site,C/EBP-β
R14129 T19638 T19637 arg1Of site,phospho-acceptor
R14130 T19638 T19639 arg1Of site,mutant
R14131 T19638 T19640 arg1Of site,","
R14132 T19641 T19640 arg2Of C/EBP-βT188A,","
R14133 T19645 T19631 arg1Of affect,Similarly
R14134 T19645 T19632 arg1Of affect,","
R14135 T19645 T19642 arg1Of affect,","
R14136 T19645 T19643 arg2Of affect,did
R14137 T19645 T19644 arg1Of affect,not
R14138 T19645 T19649 arg1Of affect,differently
R14139 T19645 T19650 arg1Of affect,from
R14140 T19648 T19645 arg2Of activity,affect
R14141 T19648 T19646 arg1Of activity,SerpinB2
R14142 T19648 T19647 arg1Of activity,promoter
R14143 T19651 T19650 arg2Of that,from
R14144 T19651 T19652 arg1Of that,of
R14145 T19653 T19652 arg2Of wild-type,of
R14146 T19655 T19654 arg2Of contrast,In
R14147 T19657 T19658 arg1Of expression,of
R14148 T19657 T19661 arg1Of expression,enhanced
R14149 T19659 T19658 arg2Of C/EBP-βS64A,of
R14150 T19661 T19654 arg1Of enhanced,In
R14151 T19661 T19656 arg1Of enhanced,","
R14152 T19661 T19660 arg1Of enhanced,significantly
R14153 T19661 T19666 arg1Of enhanced,","
R14154 T19665 T19661 arg2Of activity,enhanced
R14155 T19665 T19662 arg1Of activity,LPS-induced
R14156 T19665 T19663 arg1Of activity,SerpinB2
R14157 T19665 T19664 arg1Of activity,promoter
R14158 T19667 T19661 arg3Of indicating,enhanced
R14159 T19669 T19670 arg1Of phosphorylation,of
R14160 T19669 T19672 arg1Of phosphorylation,at
R14161 T19669 T19675 arg1Of phosphorylation,regulates
R14162 T19671 T19670 arg2Of C/EBP-β,of
R14163 T19673 T19672 arg2Of S64,at
R14164 T19675 T19667 arg2Of regulates,indicating
R14165 T19675 T19668 arg1Of regulates,that
R14166 T19675 T19674 arg1Of regulates,negatively
R14167 T19679 T19675 arg2Of activity,regulates
R14168 T19679 T19676 arg1Of activity,LPS-induced
R14169 T19679 T19677 arg1Of activity,SerpinB2
R14170 T19679 T19678 arg1Of activity,promoter
R14171 T19682 T19681 arg1Of S64,C/EBP-β
R14172 T19682 T19683 arg1Of S64,is
R14173 T19682 T19685 arg2Of S64,phosphorylated
R14174 T19685 T19680 arg2Of phosphorylated,Since
R14175 T19685 T19683 arg2Of phosphorylated,is
R14176 T19685 T19684 arg1Of phosphorylated,constitutively
R14177 T19685 T19686 arg1Of phosphorylated,in
R14178 T19689 T19687 arg1Of cells,both
R14179 T19689 T19688 arg1Of cells,RAW264.7
R14180 T19689 T19690 arg1Of cells,and
R14181 T19690 T19686 arg2Of and,in
R14182 T19691 T19690 arg2Of MEFs,and
R14183 T19691 T19692 arg1Of MEFs,[
R14184 T19693 T19692 arg2Of 73,[
R14185 T19694 T19692 arg3Of ],[
R14186 T19697 T19680 arg1Of is,Since
R14187 T19697 T19695 arg1Of is,","
R14188 T19698 T19697 arg2Of likely,is
R14189 T19700 T19701 arg1Of dephosphorylation,at
R14190 T19700 T19704 arg1Of dephosphorylation,may
R14191 T19700 T19705 arg1Of dephosphorylation,be
R14192 T19703 T19701 arg2Of site,at
R14193 T19703 T19702 arg1Of site,this
R14194 T19705 T19698 arg2Of be,likely
R14195 T19705 T19699 arg1Of be,that
R14196 T19705 T19704 arg2Of be,may
R14197 T19705 T19709 arg1Of be,during
R14198 T19708 T19705 arg2Of event,be
R14199 T19708 T19706 arg1Of event,a
R14200 T19708 T19707 arg1Of event,critical
R14201 T19711 T19709 arg2Of transcription,during
R14202 T19711 T19710 arg1Of transcription,LPS-induced
R14203 T19711 T19712 arg1Of transcription,of
R14204 T19713 T19712 arg2Of SerpinB2,of
R14205 T19715 T19696 arg1Of increase,it
R14206 T19715 T19697 arg1Of increase,is
R14207 T19715 T19698 arg1Of increase,likely
R14208 T19715 T19714 arg1Of increase,to
R14209 T19718 T19715 arg2Of activity,increase
R14210 T19718 T19716 arg1Of activity,its
R14211 T19718 T19717 arg1Of activity,promoter
R14212 T19719 T19720 arg1Of Roy,and
R14213 T19720 T19722 arg1Of and,demonstrated
R14214 T19721 T19720 arg2Of colleagues,and
R14215 T19728 T19727 arg2Of MLK3,(
R14216 T19729 T19727 arg3Of ),(
R14217 T19731 T19724 arg1Of dephosphorylation,Mixed
R14218 T19731 T19725 arg1Of dephosphorylation,lineage
R14219 T19731 T19726 arg1Of dephosphorylation,kinase-3
R14220 T19731 T19727 arg1Of dephosphorylation,(
R14221 T19731 T19730 arg1Of dephosphorylation,-driven
R14222 T19731 T19732 arg1Of dephosphorylation,of
R14223 T19731 T19735 arg1Of dephosphorylation,was
R14224 T19731 T19736 arg1Of dephosphorylation,important
R14225 T19734 T19732 arg2Of S64,of
R14226 T19734 T19733 arg1Of S64,C/EBP-β
R14227 T19735 T19722 arg2Of was,demonstrated
R14228 T19735 T19723 arg1Of was,that
R14229 T19736 T19735 arg2Of important,was
R14230 T19736 T19737 arg1Of important,for
R14231 T19740 T19737 arg2Of pathways,for
R14232 T19740 T19738 arg1Of pathways,IFNγ-regulated
R14233 T19740 T19739 arg1Of pathways,signaling
R14234 T19740 T19741 arg1Of pathways,[
R14235 T19742 T19741 arg2Of 73,[
R14236 T19743 T19741 arg3Of ],[
R14237 T19745 T19744 arg1Of data,Our
R14238 T19745 T19746 arg1Of data,suggest
R14239 T19749 T19748 arg1Of dephosphorylation,MLK3-driven
R14240 T19749 T19750 arg1Of dephosphorylation,of
R14241 T19749 T19752 arg1Of dephosphorylation,may
R14242 T19749 T19754 arg1Of dephosphorylation,be
R14243 T19749 T19755 arg2Of dephosphorylation,involved
R14244 T19751 T19750 arg2Of S64,of
R14245 T19755 T19746 arg2Of involved,suggest
R14246 T19755 T19747 arg1Of involved,that
R14247 T19755 T19752 arg2Of involved,may
R14248 T19755 T19753 arg1Of involved,also
R14249 T19755 T19754 arg2Of involved,be
R14250 T19755 T19756 arg1Of involved,in
R14251 T19758 T19756 arg2Of pathways,in
R14252 T19758 T19757 arg1Of pathways,LPS-signaling

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T18716 1342-1350 Antecedent denotes SerpinB2
T18715 1363-1366 Anaphor denotes its
R13384 T18715 T18716 boundBy its,SerpinB2

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T18760 418-423 Protein denotes Cebpb
T18759 402-413 Protein denotes C/EBPβT217A
T18758 364-400 Protein denotes C/EBP-β phospho-acceptor site mutant
T18757 324-332 Protein denotes SerpinB2
T18756 139-146 Protein denotes C/EBP-β
T18755 19-26 Protein denotes C/EBP-β
T18775 1447-1451 Protein denotes MLK3
T18774 1423-1445 Protein denotes Mixed lineage kinase-3
T18773 1342-1350 Protein denotes SerpinB2
T18772 1150-1157 Protein denotes C/EBP-β
T18771 1116-1124 Protein denotes SerpinB2
T18770 1068-1075 Protein denotes C/EBP-β
T18769 1005-1013 Protein denotes SerpinB2
T18768 958-969 Protein denotes C/EBP-βS64A
T18767 868-876 Protein denotes SerpinB2
T18766 839-851 Protein denotes C/EBP-βT188A
T18765 801-837 Protein denotes C/EBP-β phospho-acceptor site mutant
T18764 746-754 Protein denotes SerpinB2
T18763 563-571 Protein denotes SerpinB2
T18762 508-515 Protein denotes C/EBP-β
T18761 449-457 Protein denotes SerpinB2
T18778 1573-1577 Protein denotes MLK3
T18777 1511-1515 Protein denotes IFNγ
T18776 1481-1488 Protein denotes C/EBP-β

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20268 418-423 http://www.uniprot.org/uniprot/P28033 denotes Cebpb
T20266 1481-1488 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20265 1150-1157 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20264 1068-1075 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20263 801-808 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20262 508-515 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20261 364-371 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20260 139-146 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20259 19-26 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20235 1342-1350 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20234 1116-1124 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20233 1005-1013 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20232 868-876 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20231 746-754 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20230 563-571 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20229 449-457 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T20228 324-332 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T18839 1638-1656 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways
T18838 1526-1544 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways
T18837 1585-1602 http://purl.obolibrary.org/obo/GO_0016311 denotes dephosphorylation
T18836 1460-1477 http://purl.obolibrary.org/obo/GO_0016311 denotes dephosphorylation
T18835 1251-1268 http://purl.obolibrary.org/obo/GO_0016311 denotes dephosphorylation
T18834 215-224 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T18833 215-224 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T18832 95-110 http://purl.obolibrary.org/obo/GO_2000144 denotes transactivation
T18831 1049-1064 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T18830 0-15 http://purl.obolibrary.org/obo/GO_0016310 denotes Phosphorylation
T18828 732-742 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T18816 755-770 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T18809 1638-1647 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T18808 1526-1535 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T18805 1325-1338 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

sentences

Id Subject Object Predicate Lexical cue
T18507 1551-1657 Sentence denotes Our data suggest that MLK3-driven dephosphorylation of S64 may also be involved in LPS-signaling pathways.
T18506 1386-1550 Sentence denotes Roy and colleagues demonstrated that Mixed lineage kinase-3 (MLK3)-driven dephosphorylation of C/EBP-β S64 was important for IFNγ-regulated signaling pathways [73].
T18505 1144-1385 Sentence denotes Since C/EBP-β S64 is constitutively phosphorylated in both RAW264.7 cells and MEFs [73], it is likely that dephosphorylation at this site may be a critical event during LPS-induced transcription of SerpinB2 to increase its promoter activity.
T18504 931-1143 Sentence denotes In contrast, expression of C/EBP-βS64A significantly enhanced LPS-induced SerpinB2 promoter activity, indicating that phosphorylation of C/EBP-β at S64 negatively regulates LPS-induced SerpinB2 promoter activity.
T18503 772-930 Sentence denotes Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type.
T18502 651-771 Sentence denotes These data indicate that the T217 phospho-acceptor site is not important for the regulation of SerpinB2 gene expression.
T18501 339-650 Sentence denotes However, expression of a C/EBP-β phospho-acceptor site mutant, C/EBPβT217A, in Cebpb−/− MEFs did not increase SerpinB2 proximal promoter activity over that of wild-type C/EBP-β, even though recruitment of C/EBP-βT217 to the SerpinB2 promoter was observed to decrease following LPS stimulation of RAW264.7 cells.
T18500 139-338 Sentence denotes C/EBP-β phosphorylated on T217 has been reported to rescue macrophages from apoptosis induced by Bacillus anthracis lethal toxin (LT) [65], an activity that has also been attributed to SerpinB2 [16].
T18499 0-138 Sentence denotes Phosphorylation of C/EBP-β at several different amino acid residues has been shown to modulate transactivation of its target genes [63]; .
T264 0-138 Sentence denotes Phosphorylation of C/EBP-β at several different amino acid residues has been shown to modulate transactivation of its target genes [63]; .
T265 139-338 Sentence denotes C/EBP-β phosphorylated on T217 has been reported to rescue macrophages from apoptosis induced by Bacillus anthracis lethal toxin (LT) [65], an activity that has also been attributed to SerpinB2 [16].
T266 339-650 Sentence denotes However, expression of a C/EBP-β phospho-acceptor site mutant, C/EBPβT217A, in Cebpb−/− MEFs did not increase SerpinB2 proximal promoter activity over that of wild-type C/EBP-β, even though recruitment of C/EBP-βT217 to the SerpinB2 promoter was observed to decrease following LPS stimulation of RAW264.7 cells.
T267 651-771 Sentence denotes These data indicate that the T217 phospho-acceptor site is not important for the regulation of SerpinB2 gene expression.
T268 772-930 Sentence denotes Similarly, expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently from that of wild-type.
T269 931-1143 Sentence denotes In contrast, expression of C/EBP-βS64A significantly enhanced LPS-induced SerpinB2 promoter activity, indicating that phosphorylation of C/EBP-β at S64 negatively regulates LPS-induced SerpinB2 promoter activity.
T270 1144-1385 Sentence denotes Since C/EBP-β S64 is constitutively phosphorylated in both RAW264.7 cells and MEFs [73], it is likely that dephosphorylation at this site may be a critical event during LPS-induced transcription of SerpinB2 to increase its promoter activity.
T271 1386-1550 Sentence denotes Roy and colleagues demonstrated that Mixed lineage kinase-3 (MLK3)-driven dephosphorylation of C/EBP-β S64 was important for IFNγ-regulated signaling pathways [73].
T272 1551-1657 Sentence denotes Our data suggest that MLK3-driven dephosphorylation of S64 may also be involved in LPS-signaling pathways.

simple1

Id Subject Object Predicate Lexical cue
T18915 1573-1577 Protein denotes MLK3
T18914 1511-1515 Protein denotes IFNγ
T18913 1481-1488 Protein denotes C/EBP-β
T18912 1447-1451 Protein denotes MLK3
T18911 1423-1445 Protein denotes Mixed lineage kinase-3
T18910 1342-1350 Protein denotes SerpinB2
T18909 1150-1157 Protein denotes C/EBP-β
T18908 1116-1124 Protein denotes SerpinB2
T18907 1068-1075 Protein denotes C/EBP-β
T18906 1005-1013 Protein denotes SerpinB2
T18905 958-969 Protein denotes C/EBP-βS64A
T18904 868-876 Protein denotes SerpinB2
T18903 839-851 Protein denotes C/EBP-βT188A
T18902 801-837 Protein denotes C/EBP-β phospho-acceptor site mutant
T18901 746-754 Protein denotes SerpinB2
T18900 563-571 Protein denotes SerpinB2
T18899 508-515 Protein denotes C/EBP-β
T18898 449-457 Protein denotes SerpinB2
T18897 418-423 Protein denotes Cebpb
T18896 402-413 Protein denotes C/EBPβT217A
T18895 364-400 Protein denotes C/EBP-β phospho-acceptor site mutant
T18894 324-332 Protein denotes SerpinB2
T18893 139-146 Protein denotes C/EBP-β
T18892 19-26 Protein denotes C/EBP-β

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T20196 1516-1525 Regulation denotes regulated
T20195 1460-1477 Phosphorylation denotes dephosphorylation
T20194 1325-1338 Transcription denotes transcription
T20193 1313-1324 Positive_regulation denotes LPS-induced
T20192 1180-1194 Phosphorylation denotes phosphorylated
T20191 1094-1103 Regulation denotes regulates
T20190 944-954 Gene_expression denotes expression
T20189 1049-1064 Phosphorylation denotes phosphorylation
T20188 993-1004 Positive_regulation denotes LPS-induced
T20187 1104-1115 Positive_regulation denotes LPS-induced
T20186 984-992 Positive_regulation denotes enhanced
T20185 783-793 Gene_expression denotes expression
T20123 1573-1577 Protein denotes MLK3
T20122 1511-1515 Protein denotes IFNγ
T20121 1481-1488 Protein denotes C/EBP-β
T20120 1447-1451 Protein denotes MLK3
T20119 1423-1445 Protein denotes Mixed lineage kinase-3
T20118 1342-1350 Protein denotes SerpinB2
T20117 1150-1157 Protein denotes C/EBP-β
T20116 1116-1124 Protein denotes SerpinB2
T20115 1068-1075 Protein denotes C/EBP-β
T20114 1005-1013 Protein denotes SerpinB2
T20113 958-969 Protein denotes C/EBP-βS64A
T20112 868-876 Protein denotes SerpinB2
T20111 839-851 Protein denotes C/EBP-βT188A
T20110 801-837 Protein denotes C/EBP-β phospho-acceptor site mutant
T20109 746-754 Protein denotes SerpinB2
T20108 563-571 Protein denotes SerpinB2
T20107 508-515 Protein denotes C/EBP-β
T20106 449-457 Protein denotes SerpinB2
T20105 418-423 Protein denotes Cebpb
T20104 402-413 Protein denotes C/EBPβT217A
T20103 364-400 Protein denotes C/EBP-β phospho-acceptor site mutant
T20102 324-332 Protein denotes SerpinB2
T20101 139-146 Protein denotes C/EBP-β
T20100 19-26 Protein denotes C/EBP-β
T20184 861-867 Regulation denotes affect
T20183 732-742 Regulation denotes regulation
T20182 714-723 Positive_regulation denotes important
T20181 760-770 Gene_expression denotes expression
T20180 597-605 Negative_regulation denotes decrease
T20179 440-448 Positive_regulation denotes increase
T20178 348-358 Gene_expression denotes expression
T20177 529-540 Binding denotes recruitment
T20176 147-161 Phosphorylation denotes phosphorylated
T20175 0-15 Phosphorylation denotes Phosphorylation
R14541 T20100 T20176 themeOf C/EBP-β,phosphorylated
R14542 T20100 T20175 themeOf C/EBP-β,Phosphorylation
R14543 T20101 T20176 themeOf C/EBP-β,phosphorylated
R14544 T20103 T20178 themeOf C/EBP-β phospho-acceptor site mutant,expression
R14545 T20104 T20178 themeOf C/EBPβT217A,expression
R14546 T20105 T20178 themeOf Cebpb,expression
R14547 T20106 T20179 themeOf SerpinB2,increase
R14548 T20107 T20179 causeOf C/EBP-β,increase
R14549 T20107 T20179 causeOf C/EBP-β,increase
R14550 T20107 T20179 causeOf C/EBP-β,increase
R14551 T20107 T20179 causeOf C/EBP-β,increase
R14552 T20108 T20177 themeOf SerpinB2,recruitment
R14553 T20109 T20181 themeOf SerpinB2,expression
R14554 T20110 T20185 themeOf C/EBP-β phospho-acceptor site mutant,expression
R14555 T20111 T20185 themeOf C/EBP-βT188A,expression
R14556 T20112 T20184 themeOf SerpinB2,affect
R14557 T20113 T20190 themeOf C/EBP-βS64A,expression
R14558 T20114 T20186 themeOf SerpinB2,enhanced
R14559 T20114 T20188 themeOf SerpinB2,LPS-induced
R14560 T20115 T20189 themeOf C/EBP-β,phosphorylation
R14561 T20116 T20191 themeOf SerpinB2,regulates
R14562 T20116 T20187 themeOf SerpinB2,LPS-induced
R14563 T20117 T20192 themeOf C/EBP-β,phosphorylated
R14564 T20118 T20194 themeOf SerpinB2,transcription
R14565 T20121 T20195 themeOf C/EBP-β,dephosphorylation
R14566 T20122 T20196 themeOf IFNγ,regulated
R14599 T20177 T20180 themeOf recruitment,decrease
R14600 T20178 T20179 themeOf expression,increase
R14601 T20178 T20179 themeOf expression,increase
R14602 T20178 T20179 themeOf expression,increase
R14603 T20181 T20183 themeOf expression,regulation
R14604 T20183 T20182 themeOf regulation,important
R14605 T20187 T20191 themeOf LPS-induced,regulates
R14606 T20188 T20186 themeOf LPS-induced,enhanced
R14607 T20190 T20186 causeOf expression,enhanced
R14608 T20190 T20186 causeOf expression,enhanced
R14609 T20194 T20193 themeOf transcription,LPS-induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20635 1460-1477 Phosphorylation denotes dephosphorylation
T20634 1180-1194 Phosphorylation denotes phosphorylated
T20633 1313-1324 Positive_regulation denotes LPS-induced
T20632 1325-1338 Transcription denotes transcription
T20631 944-954 Gene_expression denotes expression
T20630 1049-1064 Phosphorylation denotes phosphorylation
T20629 1104-1115 Positive_regulation denotes LPS-induced
T20628 1094-1103 Regulation denotes regulates
T20627 984-992 Positive_regulation denotes enhanced
T20626 993-1004 Positive_regulation denotes LPS-induced
T20625 861-867 Regulation denotes affect
T20624 783-793 Gene_expression denotes expression
T20623 732-742 Regulation denotes regulation
T20622 760-770 Gene_expression denotes expression
T20620 440-448 Positive_regulation denotes increase
T20619 597-605 Negative_regulation denotes decrease
T20618 348-358 Gene_expression denotes expression
T20567 1150-1157 Protein denotes C/EBP-β
T20566 1116-1124 Protein denotes SerpinB2
T20565 1068-1075 Protein denotes C/EBP-β
T20564 1005-1013 Protein denotes SerpinB2
T20563 958-969 Protein denotes C/EBP-βS64A
T20562 868-876 Protein denotes SerpinB2
T20561 839-851 Protein denotes C/EBP-βT188A
T20560 801-837 Protein denotes C/EBP-β phospho-acceptor site mutant
T20559 746-754 Protein denotes SerpinB2
T20558 563-571 Protein denotes SerpinB2
T20557 508-515 Protein denotes C/EBP-β
T20556 449-457 Protein denotes SerpinB2
T20555 418-423 Protein denotes Cebpb
T20554 402-413 Protein denotes C/EBPβT217A
T20553 364-400 Protein denotes C/EBP-β phospho-acceptor site mutant
T20552 324-332 Protein denotes SerpinB2
T20551 139-146 Protein denotes C/EBP-β
T20550 19-26 Protein denotes C/EBP-β
T20573 1573-1577 Protein denotes MLK3
T20572 1511-1515 Protein denotes IFNγ
T20571 1481-1488 Protein denotes C/EBP-β
T20570 1447-1451 Protein denotes MLK3
T20569 1423-1445 Protein denotes Mixed lineage kinase-3
T20568 1342-1350 Protein denotes SerpinB2
T20621 529-540 Binding denotes recruitment
T20617 0-15 Phosphorylation denotes Phosphorylation
T20616 225-232 Positive_regulation denotes induced
T20615 147-161 Phosphorylation denotes phosphorylated
R14756 T20550 T20615 themeOf C/EBP-β,phosphorylated
R14757 T20550 T20617 themeOf C/EBP-β,Phosphorylation
R14758 T20550 T20616 themeOf C/EBP-β,induced
R14759 T20551 T20615 themeOf C/EBP-β,phosphorylated
R14760 T20553 T20618 themeOf C/EBP-β phospho-acceptor site mutant,expression
R14761 T20554 T20618 themeOf C/EBPβT217A,expression
R14762 T20555 T20618 themeOf Cebpb,expression
R14763 T20556 T20620 themeOf SerpinB2,increase
R14764 T20556 T20619 themeOf SerpinB2,decrease
R14765 T20558 T20621 themeOf SerpinB2,recruitment
R14766 T20559 T20622 themeOf SerpinB2,expression
R14767 T20560 T20624 themeOf C/EBP-β phospho-acceptor site mutant,expression
R14768 T20561 T20624 themeOf C/EBP-βT188A,expression
R14769 T20563 T20631 themeOf C/EBP-βS64A,expression
R14770 T20564 T20626 themeOf SerpinB2,LPS-induced
R14771 T20565 T20630 themeOf C/EBP-β,phosphorylation
R14772 T20566 T20629 themeOf SerpinB2,LPS-induced
R14773 T20567 T20634 themeOf C/EBP-β,phosphorylated
R14774 T20568 T20632 themeOf SerpinB2,transcription
R14775 T20571 T20635 themeOf C/EBP-β,dephosphorylation
R14789 T20618 T20620 themeOf expression,increase
R14790 T20618 T20620 themeOf expression,increase
R14791 T20618 T20620 themeOf expression,increase
R14792 T20621 T20619 themeOf recruitment,decrease
R14793 T20622 T20623 themeOf expression,regulation
R14794 T20624 T20625 themeOf expression,affect
R14795 T20624 T20625 themeOf expression,affect
R14796 T20626 T20627 themeOf LPS-induced,enhanced
R14797 T20629 T20628 themeOf LPS-induced,regulates
R14798 T20630 T20628 causeOf phosphorylation,regulates
R14799 T20632 T20633 themeOf transcription,LPS-induced

DLUT931

Id Subject Object Predicate Lexical cue
T20414 1460-1477 Phosphorylation denotes dephosphorylation
T20413 1313-1324 Positive_regulation denotes LPS-induced
T20412 1354-1362 Positive_regulation denotes increase
T20411 1325-1338 Transcription denotes transcription
T20410 1180-1194 Phosphorylation denotes phosphorylated
T20409 1104-1115 Positive_regulation denotes LPS-induced
T20408 1094-1103 Regulation denotes regulates
T20407 1049-1064 Phosphorylation denotes phosphorylation
T20406 993-1004 Positive_regulation denotes LPS-induced
T20405 984-992 Positive_regulation denotes enhanced
T20404 944-954 Gene_expression denotes expression
T20403 783-793 Gene_expression denotes expression
T20402 732-742 Regulation denotes regulation
T20401 760-770 Gene_expression denotes expression
T20400 597-605 Negative_regulation denotes decrease
T20399 529-540 Binding denotes recruitment
T20398 440-448 Positive_regulation denotes increase
T20397 348-358 Gene_expression denotes expression
T20396 147-161 Phosphorylation denotes phosphorylated
T20395 0-15 Phosphorylation denotes Phosphorylation
T20347 1573-1577 Protein denotes MLK3
T20346 1511-1515 Protein denotes IFNγ
T20345 1481-1488 Protein denotes C/EBP-β
T20344 1447-1451 Protein denotes MLK3
T20343 1423-1445 Protein denotes Mixed lineage kinase-3
T20342 1342-1350 Protein denotes SerpinB2
T20341 1150-1157 Protein denotes C/EBP-β
T20340 1116-1124 Protein denotes SerpinB2
T20339 1068-1075 Protein denotes C/EBP-β
T20338 1005-1013 Protein denotes SerpinB2
T20337 958-969 Protein denotes C/EBP-βS64A
T20336 868-876 Protein denotes SerpinB2
T20335 839-851 Protein denotes C/EBP-βT188A
T20334 801-837 Protein denotes C/EBP-β phospho-acceptor site mutant
T20333 746-754 Protein denotes SerpinB2
T20332 563-571 Protein denotes SerpinB2
T20331 508-515 Protein denotes C/EBP-β
T20330 449-457 Protein denotes SerpinB2
T20329 418-423 Protein denotes Cebpb
T20328 402-413 Protein denotes C/EBPβT217A
T20327 364-400 Protein denotes C/EBP-β phospho-acceptor site mutant
T20326 324-332 Protein denotes SerpinB2
T20325 139-146 Protein denotes C/EBP-β
T20324 19-26 Protein denotes C/EBP-β
R14643 T20324 T20395 themeOf C/EBP-β,Phosphorylation
R14644 T20325 T20396 themeOf C/EBP-β,phosphorylated
R14645 T20327 T20397 themeOf C/EBP-β phospho-acceptor site mutant,expression
R14646 T20328 T20397 themeOf C/EBPβT217A,expression
R14647 T20332 T20399 themeOf SerpinB2,recruitment
R14648 T20333 T20401 themeOf SerpinB2,expression
R14649 T20334 T20403 themeOf C/EBP-β phospho-acceptor site mutant,expression
R14650 T20335 T20403 themeOf C/EBP-βT188A,expression
R14651 T20337 T20404 themeOf C/EBP-βS64A,expression
R14652 T20338 T20406 themeOf SerpinB2,LPS-induced
R14653 T20339 T20407 themeOf C/EBP-β,phosphorylation
R14654 T20340 T20408 themeOf SerpinB2,regulates
R14655 T20340 T20409 themeOf SerpinB2,LPS-induced
R14656 T20341 T20410 themeOf C/EBP-β,phosphorylated
R14657 T20342 T20411 themeOf SerpinB2,transcription
R14658 T20343 T20414 themeOf Mixed lineage kinase-3,dephosphorylation
R14659 T20344 T20414 themeOf MLK3,dephosphorylation
R14660 T20345 T20414 themeOf C/EBP-β,dephosphorylation
R14687 T20397 T20398 themeOf expression,increase
R14688 T20397 T20398 themeOf expression,increase
R14689 T20399 T20400 themeOf recruitment,decrease
R14690 T20401 T20402 themeOf expression,regulation
R14691 T20404 T20405 themeOf expression,enhanced
R14692 T20406 T20405 themeOf LPS-induced,enhanced
R14693 T20407 T20408 causeOf phosphorylation,regulates
R14694 T20407 T20408 causeOf phosphorylation,regulates
R14695 T20409 T20408 themeOf LPS-induced,regulates
R14696 T20411 T20412 themeOf transcription,increase
R14697 T20411 T20413 themeOf transcription,LPS-induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue Negation
T21120 1313-1350 Transcription denotes LPS-induced transcription of SerpinB2
T21118 743-770 Gene_expression denotes of SerpinB2 gene expression
T21116 724-770 Regulation denotes for the regulation of SerpinB2 gene expression
T21112 944-969 Gene_expression denotes expression of C/EBP-βS64A
T21106 931-1031 Positive_regulation denotes In contrast, expression of C/EBP-βS64A significantly enhanced LPS-induced SerpinB2 promoter activity
T21105 1033-1142 Regulation denotes indicating that phosphorylation of C/EBP-β at S64 negatively regulates LPS-induced SerpinB2 promoter activity
T21102 1150-1232 Phosphorylation denotes C/EBP-β S64 is constitutively phosphorylated in both RAW264.7 cells and MEFs [73],
T21101 783-852 Gene_expression denotes expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A,
T21099 1049-1082 Phosphorylation denotes phosphorylation of C/EBP-β at S64
T21098 139-169 Phosphorylation denotes C/EBP-β phosphorylated on T217
T21082 783-906 Regulation denotes expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently true
T21071 563-571 Protein denotes SerpinB2
T21069 1313-1324 Entity denotes LPS-induced
T21062 1150-1157 Protein denotes C/EBP-β
T21051 1104-1115 Entity denotes LPS-induced
T21046 868-885 Entity denotes SerpinB2 promoter
T21044 1481-1488 Protein denotes C/EBP-β
T21038 139-169 Protein denotes C/EBP-β phosphorylated on T217
T21035 1222-1226 Protein denotes MEFs
T21033 1478-1492 Entity denotes of C/EBP-β S64
T21031 1005-1022 Entity denotes SerpinB2 promoter
T21030 380-388 Entity denotes acceptor
T21028 616-619 Entity denotes LPS
T21023 746-759 Protein denotes SerpinB2 gene
T21022 359-400 Entity denotes of a C/EBP-β phospho-acceptor site mutant
T21019 839-851 Protein denotes C/EBP-βT188A
T21016 676-706 Entity denotes the T217 phospho-acceptor site
T21014 498-516 Protein denotes wild-type C/EBP-β,
T21012 1339-1350 Protein denotes of SerpinB2
T21011 1511-1525 Protein denotes IFNγ-regulated
T21010 449-457 Protein denotes SerpinB2
T21009 1573-1584 Protein denotes MLK3-driven
T21007 324-337 Protein denotes SerpinB2 [16]
T21005 16-26 Protein denotes of C/EBP-β
T21001 30-67 Entity denotes several different amino acid residues
T20997 955-969 Protein denotes of C/EBP-βS64A
T20996 794-837 Protein denotes of the C/EBP-β phospho-acceptor site mutant
T20992 868-876 Protein denotes SerpinB2
T20988 680-684 Entity denotes T217
T20977 125-135 Protein denotes genes [63]
T20974 1116-1124 Protein denotes SerpinB2
T20973 359-400 Entity denotes of a C/EBP-β phospho-acceptor site mutant
T20969 1603-1609 Entity denotes of S64
T20964 427-431 Protein denotes MEFs
T20955 676-706 Entity denotes the T217 phospho-acceptor site
T20947 1272-1281 Entity denotes this site
T20943 402-424 Protein denotes C/EBPβT217A, in Cebpb−
T20942 48-58 Entity denotes amino acid
T20939 1079-1082 Entity denotes S64
T20938 1367-1375 Entity denotes promoter
T20934 191-209 Entity denotes rescue macrophages
T20931 1005-1013 Protein denotes SerpinB2
T20930 1631-1656 Entity denotes in LPS-signaling pathways
T20928 746-754 Protein denotes SerpinB2
T20927 255-272 Protein denotes lethal toxin (LT)
T20925 1418-1452 Protein denotes that Mixed lineage kinase-3 (MLK3)
T20924 1116-1133 Entity denotes SerpinB2 promoter
T20920 559-580 Entity denotes the SerpinB2 promoter
T20919 418-424 Protein denotes Cebpb−
T20918 467-475 Entity denotes promoter
T20915 1065-1075 Protein denotes of C/EBP-β
T20909 993-1004 Entity denotes LPS-induced
T20904 1150-1161 Entity denotes C/EBP-β S64
T20951 1447-1451 Protein denotes MLK3
T20949 165-169 Entity denotes T217
R14933 T20904 T21062 partOf C/EBP-β S64,C/EBP-β
R14934 T20904 T21102 siteOf C/EBP-β S64,"C/EBP-β S64 is constitutively phosphorylated in both RAW264.7 cells and MEFs [73],"
R14935 T20915 T21099 themeOf of C/EBP-β,phosphorylation of C/EBP-β at S64
R14939 T20939 T20915 partOf S64,of C/EBP-β
R14940 T20939 T21099 siteOf S64,phosphorylation of C/EBP-β at S64
R14941 T20949 T21038 partOf T217,C/EBP-β phosphorylated on T217
R14942 T20949 T21098 siteOf T217,C/EBP-β phosphorylated on T217
R14954 T20996 T21101 themeOf of the C/EBP-β phospho-acceptor site mutant,"expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A,"
R14955 T20997 T21112 themeOf of C/EBP-βS64A,expression of C/EBP-βS64A
R14960 T21012 T21120 themeOf of SerpinB2,LPS-induced transcription of SerpinB2
R14962 T21023 T21118 themeOf SerpinB2 gene,of SerpinB2 gene expression
R14965 T21038 T21098 themeOf C/EBP-β phosphorylated on T217,C/EBP-β phosphorylated on T217
R14969 T21062 T21102 themeOf C/EBP-β,"C/EBP-β S64 is constitutively phosphorylated in both RAW264.7 cells and MEFs [73],"
R14976 T21099 T21105 causeOf phosphorylation of C/EBP-β at S64,indicating that phosphorylation of C/EBP-β at S64 negatively regulates LPS-induced SerpinB2 promoter activity
R14978 T21101 T21082 causeOf "expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A,","expression of the C/EBP-β phospho-acceptor site mutant, C/EBP-βT188A, did not affect SerpinB2 promoter activity differently"
R14980 T21112 T21106 causeOf expression of C/EBP-βS64A,"In contrast, expression of C/EBP-βS64A significantly enhanced LPS-induced SerpinB2 promoter activity"
R14981 T21118 T21116 themeOf of SerpinB2 gene expression,for the regulation of SerpinB2 gene expression

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T20757 1573-1577 Protein denotes MLK3
T20756 1460-1477 Phosphorylation denotes dephosphorylation
T20755 1460-1477 Phosphorylation denotes dephosphorylation
T20754 1460-1477 Phosphorylation denotes dephosphorylation
T20753 1511-1515 Protein denotes IFNγ
T20752 1481-1492 Protein denotes C/EBP-β S64
T20751 1447-1451 Protein denotes MLK3
T20750 1423-1445 Protein denotes Mixed lineage kinase-3
T20749 1354-1362 Positive_regulation denotes increase
T20748 1325-1338 Transcription denotes transcription
T20747 1180-1194 Phosphorylation denotes phosphorylated
T20746 1342-1350 Protein denotes SerpinB2
T20745 1150-1161 Protein denotes C/EBP-β S64
T20744 1094-1103 Regulation denotes regulates
T20743 1049-1064 Phosphorylation denotes phosphorylation
T20742 984-992 Positive_regulation denotes enhanced
T20741 944-954 Gene_expression denotes expression
T20740 1116-1133 Protein denotes SerpinB2 promoter
T20739 1068-1075 Protein denotes C/EBP-β
T20738 1005-1022 Protein denotes SerpinB2 promoter
T20737 958-969 Protein denotes C/EBP-βS64A
T20736 861-867 Regulation denotes affect
T20735 861-867 Regulation denotes affect
T20734 783-793 Gene_expression denotes expression
T20733 783-793 Gene_expression denotes expression
T20732 868-885 Protein denotes SerpinB2 promoter
T20731 839-851 Protein denotes C/EBP-βT188A
T20730 801-837 Protein denotes C/EBP-β phospho-acceptor site mutant
T20729 732-742 Regulation denotes regulation
T20728 760-770 Gene_expression denotes expression
T20727 746-759 Protein denotes SerpinB2 gene
T20726 597-605 Negative_regulation denotes decrease
T20725 529-540 Binding denotes recruitment
T20724 348-358 Gene_expression denotes expression
T20723 348-358 Gene_expression denotes expression
T20722 348-358 Gene_expression denotes expression
T20721 563-580 Protein denotes SerpinB2 promoter
T20720 544-555 Protein denotes C/EBP-βT217
T20719 449-475 Protein denotes SerpinB2 proximal promoter
T20718 418-431 Protein denotes Cebpb−/− MEFs
T20717 402-413 Protein denotes C/EBPβT217A
T20716 364-400 Protein denotes C/EBP-β phospho-acceptor site mutant
T20715 147-161 Phosphorylation denotes phosphorylated
T20714 139-146 Protein denotes C/EBP-β
T20713 19-26 Protein denotes C/EBP-β
R14838 T20714 T20715 themeOf C/EBP-β,phosphorylated
R14839 T20716 T20722 themeOf C/EBP-β phospho-acceptor site mutant,expression
R14840 T20717 T20723 themeOf C/EBPβT217A,expression
R14841 T20718 T20724 themeOf Cebpb−/− MEFs,expression
R14842 T20720 T20725 themeOf C/EBP-βT217,recruitment
R14843 T20721 T20725 themeOf SerpinB2 promoter,recruitment
R14844 T20725 T20726 themeOf recruitment,decrease
R14845 T20727 T20728 themeOf SerpinB2 gene,expression
R14846 T20728 T20729 themeOf expression,regulation
R14847 T20730 T20733 themeOf C/EBP-β phospho-acceptor site mutant,expression
R14848 T20731 T20734 themeOf C/EBP-βT188A,expression
R14849 T20733 T20735 themeOf expression,affect
R14850 T20734 T20736 themeOf expression,affect
R14851 T20737 T20741 themeOf C/EBP-βS64A,expression
R14852 T20738 T20742 themeOf SerpinB2 promoter,enhanced
R14853 T20739 T20743 themeOf C/EBP-β,phosphorylation
R14854 T20741 T20742 causeOf expression,enhanced
R14855 T20743 T20744 themeOf phosphorylation,regulates
R14856 T20745 T20747 themeOf C/EBP-β S64,phosphorylated
R14857 T20746 T20748 themeOf SerpinB2,transcription
R14858 T20748 T20749 themeOf transcription,increase
R14859 T20750 T20754 themeOf Mixed lineage kinase-3,dephosphorylation
R14860 T20751 T20755 themeOf MLK3,dephosphorylation
R14861 T20752 T20756 themeOf C/EBP-β S64,dephosphorylation

testone

Id Subject Object Predicate Lexical cue
T18276 1251-1268 Phosphorylation denotes dephosphorylation
T18275 1180-1194 Phosphorylation denotes phosphorylated
T18274 1049-1064 Phosphorylation denotes phosphorylation
T18273 944-954 Gene_expression denotes expression
T18272 809-816 Phosphorylation denotes phospho
T18271 783-793 Gene_expression denotes expression
T18270 732-742 Regulation denotes regulation
T18269 597-605 Negative_regulation denotes decrease
T18268 572-580 Entity denotes promoter
T18267 529-540 Binding denotes recruitment
T18266 348-358 Gene_expression denotes expression
T18265 147-161 Phosphorylation denotes phosphorylated
T18264 0-15 Phosphorylation denotes Phosphorylation
T18226 1573-1577 Protein denotes MLK3
T18225 1511-1515 Protein denotes IFNγ
T18224 1481-1488 Protein denotes C/EBP-β
T18223 1447-1451 Protein denotes MLK3
T18222 1423-1445 Protein denotes Mixed lineage kinase-3
T18221 1342-1350 Protein denotes SerpinB2
T18220 1150-1157 Protein denotes C/EBP-β
T18219 1116-1124 Protein denotes SerpinB2
T18218 1068-1075 Protein denotes C/EBP-β
T18217 1005-1013 Protein denotes SerpinB2
T18216 958-969 Protein denotes C/EBP-βS64A
T18215 868-876 Protein denotes SerpinB2
T18214 839-851 Protein denotes C/EBP-βT188A
T18213 801-837 Protein denotes C/EBP-β phospho-acceptor site mutant
T18212 746-754 Protein denotes SerpinB2
T18211 563-571 Protein denotes SerpinB2
T18210 508-515 Protein denotes C/EBP-β
T18209 449-457 Protein denotes SerpinB2
T18208 418-423 Protein denotes Cebpb
T18207 402-413 Protein denotes C/EBPβT217A
T18206 364-400 Protein denotes C/EBP-β phospho-acceptor site mutant
T18205 324-332 Protein denotes SerpinB2
T18204 139-146 Protein denotes C/EBP-β
T18203 19-26 Protein denotes C/EBP-β
R13132 T18203 T18264 themeOf C/EBP-β,Phosphorylation
R13133 T18204 T18265 themeOf C/EBP-β,phosphorylated
R13134 T18206 T18266 themeOf C/EBP-β phospho-acceptor site mutant,expression
R13135 T18207 T18266 themeOf C/EBPβT217A,expression
R13136 T18213 T18271 themeOf C/EBP-β phospho-acceptor site mutant,expression
R13137 T18214 T18271 themeOf C/EBP-βT188A,expression
R13138 T18216 T18273 themeOf C/EBP-βS64A,expression
R13139 T18218 T18274 themeOf C/EBP-β,phosphorylation
R13140 T18220 T18275 themeOf C/EBP-β,phosphorylated
R13141 T18223 T18222 equivalentTo MLK3,Mixed lineage kinase-3
R13153 T18267 T18269 themeOf recruitment,decrease
R13154 T18268 T18267 themeOf promoter,recruitment
R13155 T18268 T18211 partOf promoter,SerpinB2

test3

Id Subject Object Predicate Lexical cue
T18464 1573-1577 Protein denotes MLK3
T18463 1511-1515 Protein denotes IFNγ
T18462 1481-1488 Protein denotes C/EBP-β
T18461 1447-1451 Protein denotes MLK3
T18460 1423-1445 Protein denotes Mixed lineage kinase-3
T18459 1354-1362 Positive_regulation denotes increase
T18458 1342-1350 Protein denotes SerpinB2
T18457 1325-1338 Transcription denotes transcription
T18456 1317-1324 Positive_regulation denotes induced
T18455 1251-1268 Phosphorylation denotes dephosphorylation
T18454 1180-1194 Phosphorylation denotes phosphorylated
T18453 1150-1157 Protein denotes C/EBP-β
T18452 1116-1124 Protein denotes SerpinB2
T18451 1108-1115 Positive_regulation denotes induced
T18450 1094-1103 Regulation denotes regulates
T18449 1068-1075 Protein denotes C/EBP-β
T18448 1049-1064 Phosphorylation denotes phosphorylation
T18447 1005-1013 Protein denotes SerpinB2
T18446 997-1004 Positive_regulation denotes induced
T18445 984-992 Positive_regulation denotes enhanced
T18444 958-969 Protein denotes C/EBP-βS64A
T18443 944-954 Gene_expression denotes expression
T18442 877-885 Entity denotes promoter
T18441 868-876 Protein denotes SerpinB2
T18440 861-867 Regulation denotes affect
T18439 839-851 Protein denotes C/EBP-βT188A
T18438 801-837 Protein denotes C/EBP-β phospho-acceptor site mutant
T18437 783-793 Gene_expression denotes expression
T18436 760-770 Gene_expression denotes expression
T18435 746-754 Protein denotes SerpinB2
T18434 732-742 Regulation denotes regulation
T18433 597-605 Negative_regulation denotes decrease
T18432 572-580 Entity denotes promoter
T18431 563-571 Protein denotes SerpinB2
T18430 529-540 Binding denotes recruitment
T18429 508-515 Protein denotes C/EBP-β
T18428 449-457 Protein denotes SerpinB2
T18427 440-448 Positive_regulation denotes increase
T18426 418-423 Protein denotes Cebpb
T18425 402-413 Protein denotes C/EBPβT217A
T18424 364-400 Protein denotes C/EBP-β phospho-acceptor site mutant
T18423 348-358 Gene_expression denotes expression
T18422 324-332 Protein denotes SerpinB2
T18421 147-161 Phosphorylation denotes phosphorylated
T18420 139-146 Protein denotes C/EBP-β
T18419 19-26 Protein denotes C/EBP-β
T18418 0-15 Phosphorylation denotes Phosphorylation
T18340 1447-1451 Protein denotes MLK3
T18339 1423-1445 Protein denotes Mixed lineage kinase-3
T18338 1342-1350 Protein denotes SerpinB2
T18337 1150-1157 Protein denotes C/EBP-β
T18336 1116-1124 Protein denotes SerpinB2
T18335 1068-1075 Protein denotes C/EBP-β
T18334 1005-1013 Protein denotes SerpinB2
T18333 958-969 Protein denotes C/EBP-βS64A
T18332 868-876 Protein denotes SerpinB2
T18331 839-851 Protein denotes C/EBP-βT188A
T18330 801-837 Protein denotes C/EBP-β phospho-acceptor site mutant
T18329 746-754 Protein denotes SerpinB2
T18328 563-571 Protein denotes SerpinB2
T18327 508-515 Protein denotes C/EBP-β
T18326 449-457 Protein denotes SerpinB2
T18325 418-423 Protein denotes Cebpb
T18324 402-413 Protein denotes C/EBPβT217A
T18323 364-400 Protein denotes C/EBP-β phospho-acceptor site mutant
T18322 324-332 Protein denotes SerpinB2
T18321 139-146 Protein denotes C/EBP-β
T18320 19-26 Protein denotes C/EBP-β
T18343 1573-1577 Protein denotes MLK3
T18342 1511-1515 Protein denotes IFNγ
T18341 1481-1488 Protein denotes C/EBP-β
R13196 T18419 T18418 themeOf C/EBP-β,Phosphorylation
R13197 T18420 T18421 themeOf C/EBP-β,phosphorylated
R13198 T18424 T18423 themeOf C/EBP-β phospho-acceptor site mutant,expression
R13199 T18425 T18423 themeOf C/EBPβT217A,expression
R13200 T18430 T18433 themeOf recruitment,decrease
R13201 T18432 T18431 partOf promoter,SerpinB2
R13202 T18432 T18430 themeOf promoter,recruitment
R13203 T18435 T18436 themeOf SerpinB2,expression
R13204 T18436 T18434 themeOf expression,regulation
R13205 T18437 T18440 causeOf expression,affect
R13206 T18438 T18437 themeOf C/EBP-β phospho-acceptor site mutant,expression
R13207 T18439 T18437 themeOf C/EBP-βT188A,expression
R13208 T18442 T18441 partOf promoter,SerpinB2
R13209 T18443 T18445 causeOf expression,enhanced
R13210 T18444 T18443 themeOf C/EBP-βS64A,expression
R13211 T18446 T18445 themeOf induced,enhanced
R13212 T18448 T18450 causeOf phosphorylation,regulates
R13213 T18449 T18448 themeOf C/EBP-β,phosphorylation
R13214 T18451 T18450 themeOf induced,regulates
R13215 T18457 T18456 themeOf transcription,induced
R13216 T18458 T18457 themeOf SerpinB2,transcription
R13217 T18461 T18460 equivalentTo MLK3,Mixed lineage kinase-3