PMC:3589482 / 42960-43021 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3589482","sourcedb":"PMC","sourceid":"3589482","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3589482","text":"both constitutive and LPS-induced SerpinB2 gene transcription","tracks":[{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T21537","span":{"begin":48,"end":61},"obj":"NN"},{"id":"T21536","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T21535","span":{"begin":34,"end":42},"obj":"JJ"},{"id":"T21534","span":{"begin":22,"end":33},"obj":"JJ"},{"id":"T21533","span":{"begin":18,"end":21},"obj":"CC"},{"id":"T21532","span":{"begin":5,"end":17},"obj":"JJ"},{"id":"T21531","span":{"begin":0,"end":4},"obj":"DT"}],"relations":[{"id":"R15392","pred":"preconj","subj":"T21531","obj":"T21532"},{"id":"R15393","pred":"nmod","subj":"T21532","obj":"T21537"},{"id":"R15394","pred":"cc","subj":"T21533","obj":"T21532"},{"id":"R15395","pred":"conj","subj":"T21534","obj":"T21532"},{"id":"R15396","pred":"amod","subj":"T21535","obj":"T21537"},{"id":"R15397","pred":"compound","subj":"T21536","obj":"T21537"}],"attributes":[{"subj":"T21537","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21536","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21535","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21534","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21533","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21532","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21531","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T19301","span":{"begin":18,"end":21},"obj":"CC"},{"id":"T19300","span":{"begin":5,"end":17},"obj":"JJ"},{"id":"T19299","span":{"begin":0,"end":4},"obj":"CC"},{"id":"T19305","span":{"begin":48,"end":61},"obj":"NN"},{"id":"T19304","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T19303","span":{"begin":34,"end":42},"obj":"NN"},{"id":"T19302","span":{"begin":22,"end":33},"obj":"JJ"}],"relations":[{"id":"R13774","pred":"arg1Of","subj":"T19300","obj":"T19301"},{"id":"R13775","pred":"arg2Of","subj":"T19302","obj":"T19301"},{"id":"R13777","pred":"arg1Of","subj":"T19305","obj":"T19299"},{"id":"R13778","pred":"arg1Of","subj":"T19305","obj":"T19300"},{"id":"R13779","pred":"arg1Of","subj":"T19305","obj":"T19302"},{"id":"R13780","pred":"arg1Of","subj":"T19305","obj":"T19303"},{"id":"R13781","pred":"arg1Of","subj":"T19305","obj":"T19304"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T19301","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19300","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19299","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19305","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19304","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19303","pred":"source","obj":"pmc-enju-pas"},{"subj":"T19302","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T18737","span":{"begin":34,"end":42},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T18737","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T20219","span":{"begin":34,"end":42},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T20219","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-BP","denotations":[{"id":"T18803","span":{"begin":48,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"attributes":[{"subj":"T18803","pred":"source","obj":"GO-BP"}]},{"project":"simple1","denotations":[{"id":"T18874","span":{"begin":34,"end":42},"obj":"Protein"}],"attributes":[{"subj":"T18874","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T20082","span":{"begin":34,"end":42},"obj":"Protein"},{"id":"T20160","span":{"begin":22,"end":33},"obj":"Positive_regulation"},{"id":"T20159","span":{"begin":48,"end":61},"obj":"Transcription"}],"relations":[{"id":"R14524","pred":"themeOf","subj":"T20082","obj":"T20160"},{"id":"R14525","pred":"themeOf","subj":"T20082","obj":"T20159"}],"attributes":[{"subj":"T20082","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T20160","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T20159","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T20532","span":{"begin":34,"end":42},"obj":"Protein"},{"id":"T20600","span":{"begin":22,"end":33},"obj":"Positive_regulation"},{"id":"T20599","span":{"begin":48,"end":61},"obj":"Transcription"}],"relations":[{"id":"R14740","pred":"themeOf","subj":"T20532","obj":"T20600"},{"id":"R14741","pred":"themeOf","subj":"T20532","obj":"T20599"},{"id":"R14784","pred":"themeOf","subj":"T20599","obj":"T20600"}],"attributes":[{"subj":"T20532","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T20600","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T20599","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T20380","span":{"begin":22,"end":33},"obj":"Positive_regulation"},{"id":"T20378","span":{"begin":48,"end":61},"obj":"Transcription"},{"id":"T20306","span":{"begin":34,"end":42},"obj":"Protein"}],"relations":[{"id":"R14630","pred":"themeOf","subj":"T20306","obj":"T20378"},{"id":"R14677","pred":"themeOf","subj":"T20378","obj":"T20380"}],"attributes":[{"subj":"T20380","pred":"source","obj":"DLUT931"},{"subj":"T20378","pred":"source","obj":"DLUT931"},{"subj":"T20306","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T21093","span":{"begin":0,"end":61},"obj":"Transcription"},{"id":"T20999","span":{"begin":22,"end":33},"obj":"Entity"},{"id":"T20998","span":{"begin":0,"end":61},"obj":"Protein"},{"id":"T20933","span":{"begin":43,"end":47},"obj":"Protein"}],"relations":[{"id":"R14936","pred":"themeOf","subj":"T20933","obj":"T21093"}],"attributes":[{"subj":"T21093","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T20999","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T20998","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T20933","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"testone","denotations":[{"id":"T18250","span":{"begin":26,"end":33},"obj":"Positive_regulation"},{"id":"T18185","span":{"begin":34,"end":42},"obj":"Protein"}],"attributes":[{"subj":"T18250","pred":"source","obj":"testone"},{"subj":"T18185","pred":"source","obj":"testone"}]},{"project":"test3","denotations":[{"id":"T18388","span":{"begin":48,"end":61},"obj":"Transcription"},{"id":"T18387","span":{"begin":34,"end":42},"obj":"Protein"},{"id":"T18386","span":{"begin":26,"end":33},"obj":"Positive_regulation"},{"id":"T18302","span":{"begin":34,"end":42},"obj":"Protein"}],"relations":[{"id":"R13176","pred":"themeOf","subj":"T18387","obj":"T18388"},{"id":"R13177","pred":"themeOf","subj":"T18388","obj":"T18386"}],"attributes":[{"subj":"T18388","pred":"source","obj":"test3"},{"subj":"T18387","pred":"source","obj":"test3"},{"subj":"T18386","pred":"source","obj":"test3"},{"subj":"T18302","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#eca393","default":true},{"id":"pmc-enju-pas","color":"#939cec"},{"id":"bionlp-st-ge-2016-test-proteins","color":"#b6ec93"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ec93d0"},{"id":"GO-BP","color":"#93ebec"},{"id":"simple1","color":"#ecd393"},{"id":"BioNLP16_DUT","color":"#b993ec"},{"id":"BioNLP16_Messiy","color":"#93ec9f"},{"id":"DLUT931","color":"#ec93a0"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#93baec"},{"id":"testone","color":"#d4ec93"},{"id":"test3","color":"#e993ec"}]}]}}