PMC:3589482 / 39866-39932 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T17940","span":{"begin":65,"end":66},"obj":"NNP"},{"id":"T17939","span":{"begin":63,"end":65},"obj":"CD"},{"id":"T17938","span":{"begin":62,"end":63},"obj":"NNP"},{"id":"T17937","span":{"begin":56,"end":61},"obj":"NNP"},{"id":"T17936","span":{"begin":52,"end":55},"obj":"CC"},{"id":"T17935","span":{"begin":47,"end":51},"obj":"NNP"},{"id":"T17934","span":{"begin":37,"end":46},"obj":"NNS"},{"id":"T17933","span":{"begin":33,"end":36},"obj":"DT"},{"id":"T17932","span":{"begin":30,"end":32},"obj":"IN"},{"id":"T17931","span":{"begin":16,"end":29},"obj":"NN"},{"id":"T17930","span":{"begin":4,"end":15},"obj":"JJ"},{"id":"T17929","span":{"begin":0,"end":3},"obj":"IN"}],"relations":[{"id":"R12985","pred":"amod","subj":"T17930","obj":"T17931"},{"id":"R12986","pred":"pobj","subj":"T17931","obj":"T17929"},{"id":"R12987","pred":"prep","subj":"T17932","obj":"T17931"},{"id":"R12988","pred":"det","subj":"T17933","obj":"T17934"},{"id":"R12989","pred":"compound","subj":"T17934","obj":"T17935"},{"id":"R12990","pred":"pobj","subj":"T17935","obj":"T17932"},{"id":"R12991","pred":"cc","subj":"T17936","obj":"T17935"},{"id":"R12992","pred":"compound","subj":"T17937","obj":"T17938"},{"id":"R12993","pred":"conj","subj":"T17938","obj":"T17935"},{"id":"R12994","pred":"nummod","subj":"T17939","obj":"T17940"},{"id":"R12995","pred":"conj","subj":"T17940","obj":"T17935"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    2_test

    {"project":"2_test","denotations":[{"id":"23472114-17433708-87899186","span":{"begin":63,"end":65},"obj":"17433708"},{"id":"T18108","span":{"begin":63,"end":65},"obj":"17433708"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T16966","span":{"begin":65,"end":66},"obj":"-RRB-"},{"id":"T16965","span":{"begin":63,"end":65},"obj":"CD"},{"id":"T16964","span":{"begin":62,"end":63},"obj":"-LRB-"},{"id":"T16963","span":{"begin":56,"end":61},"obj":"NN"},{"id":"T16962","span":{"begin":52,"end":55},"obj":"CC"},{"id":"T16961","span":{"begin":47,"end":51},"obj":"NN"},{"id":"T16960","span":{"begin":37,"end":46},"obj":"NN"},{"id":"T16959","span":{"begin":33,"end":36},"obj":"DT"},{"id":"T16958","span":{"begin":30,"end":32},"obj":"IN"},{"id":"T16957","span":{"begin":16,"end":29},"obj":"NN"},{"id":"T16956","span":{"begin":4,"end":15},"obj":"JJ"},{"id":"T16955","span":{"begin":0,"end":3},"obj":"IN"}],"relations":[{"id":"R12335","pred":"arg2Of","subj":"T16957","obj":"T16955"},{"id":"R12336","pred":"arg1Of","subj":"T16957","obj":"T16956"},{"id":"R12337","pred":"arg1Of","subj":"T16957","obj":"T16958"},{"id":"R12338","pred":"arg1Of","subj":"T16960","obj":"T16959"},{"id":"R12339","pred":"arg1Of","subj":"T16961","obj":"T16962"},{"id":"R12340","pred":"arg2Of","subj":"T16962","obj":"T16958"},{"id":"R12341","pred":"arg1Of","subj":"T16962","obj":"T16960"},{"id":"R12342","pred":"arg2Of","subj":"T16963","obj":"T16962"},{"id":"R12343","pred":"arg2Of","subj":"T16965","obj":"T16964"},{"id":"R12344","pred":"arg3Of","subj":"T16966","obj":"T16964"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T16638","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T16637","span":{"begin":47,"end":51},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T17216","span":{"begin":47,"end":51},"obj":"http://www.uniprot.org/uniprot/P05231"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T16680","span":{"begin":56,"end":59},"obj":"http://purl.obolibrary.org/obo/GO_0004298"},{"id":"T16661","span":{"begin":16,"end":29},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T16682","span":{"begin":56,"end":59},"obj":"http://purl.obolibrary.org/obo/GO_0004298"},{"id":"T16681","span":{"begin":47,"end":51},"obj":"http://purl.obolibrary.org/obo/GO_0005138"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    simple1

    {"project":"simple1","denotations":[{"id":"T16712","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T16711","span":{"begin":47,"end":51},"obj":"Protein"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T17171","span":{"begin":16,"end":29},"obj":"Transcription"},{"id":"T17169","span":{"begin":4,"end":15},"obj":"Positive_regulation"},{"id":"T17133","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T17132","span":{"begin":47,"end":51},"obj":"Protein"}],"relations":[{"id":"R12471","pred":"themeOf","subj":"T17132","obj":"T17171"},{"id":"R12472","pred":"themeOf","subj":"T17133","obj":"T17171"},{"id":"R12489","pred":"themeOf","subj":"T17171","obj":"T17169"},{"id":"R12490","pred":"themeOf","subj":"T17171","obj":"T17169"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T17369","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T17368","span":{"begin":47,"end":51},"obj":"Protein"},{"id":"T17400","span":{"begin":4,"end":15},"obj":"Positive_regulation"},{"id":"T17399","span":{"begin":16,"end":29},"obj":"Transcription"}],"relations":[{"id":"R12574","pred":"themeOf","subj":"T17369","obj":"T17399"},{"id":"R12592","pred":"themeOf","subj":"T17399","obj":"T17400"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T17282","span":{"begin":4,"end":15},"obj":"Positive_regulation"},{"id":"T17281","span":{"begin":16,"end":29},"obj":"Transcription"},{"id":"T17245","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T17244","span":{"begin":47,"end":51},"obj":"Protein"}],"relations":[{"id":"R12516","pred":"themeOf","subj":"T17244","obj":"T17281"},{"id":"R12517","pred":"themeOf","subj":"T17245","obj":"T17281"},{"id":"R12539","pred":"themeOf","subj":"T17281","obj":"T17282"},{"id":"R12540","pred":"themeOf","subj":"T17281","obj":"T17282"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T17637","span":{"begin":0,"end":66},"obj":"Transcription"},{"id":"T17636","span":{"begin":0,"end":66},"obj":"Transcription"},{"id":"T17595","span":{"begin":33,"end":51},"obj":"Protein"},{"id":"T17587","span":{"begin":33,"end":51},"obj":"Protein"},{"id":"T17586","span":{"begin":4,"end":15},"obj":"Entity"},{"id":"T17553","span":{"begin":56,"end":61},"obj":"Protein"}],"relations":[{"id":"R12676","pred":"themeOf","subj":"T17553","obj":"T17637"},{"id":"R12688","pred":"themeOf","subj":"T17595","obj":"T17636"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T17463","span":{"begin":16,"end":29},"obj":"Transcription"},{"id":"T17462","span":{"begin":16,"end":29},"obj":"Transcription"},{"id":"T17461","span":{"begin":37,"end":51},"obj":"Protein"}],"relations":[{"id":"R12625","pred":"themeOf","subj":"T17461","obj":"T17463"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    testone

    {"project":"testone","denotations":[{"id":"T16366","span":{"begin":16,"end":29},"obj":"Transcription"},{"id":"T16365","span":{"begin":8,"end":15},"obj":"Positive_regulation"},{"id":"T16333","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T16332","span":{"begin":47,"end":51},"obj":"Protein"}],"relations":[{"id":"R11967","pred":"themeOf","subj":"T16332","obj":"T16366"},{"id":"R11968","pred":"themeOf","subj":"T16333","obj":"T16366"},{"id":"R11980","pred":"themeOf","subj":"T16366","obj":"T16365"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}

    test3

    {"project":"test3","denotations":[{"id":"T16470","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T16469","span":{"begin":47,"end":51},"obj":"Protein"},{"id":"T16468","span":{"begin":16,"end":29},"obj":"Transcription"},{"id":"T16467","span":{"begin":8,"end":15},"obj":"Positive_regulation"},{"id":"T16405","span":{"begin":56,"end":61},"obj":"Protein"},{"id":"T16404","span":{"begin":47,"end":51},"obj":"Protein"}],"relations":[{"id":"R12003","pred":"themeOf","subj":"T16468","obj":"T16467"},{"id":"R12004","pred":"themeOf","subj":"T16469","obj":"T16468"},{"id":"R12005","pred":"themeOf","subj":"T16470","obj":"T16468"}],"text":"for LPS-induced transcription of the cytokines IL-6 and MCP-1 [64]"}