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PMC:3589482 / 38351-38453 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T17664 94-102 NNP denotes Activity
T17663 85-93 NNP denotes Promoter
T17662 76-84 NNP denotes SerpinB2
T17661 61-75 JJ denotes LPS-stimulated
T17660 51-60 VBZ denotes Regulates
T17659 40-50 RB denotes negatively
T17658 37-39 CD denotes 64
T17657 30-36 NNP denotes Serine
T17656 27-29 IN denotes at
T17655 25-26 NN denotes β
T17654 24-25 : denotes -
T17653 19-24 NNP denotes C/EBP
T17652 16-18 IN denotes of
T17651 0-15 NNP denotes Phosphorylation
R12706 T17651 T17660 nsubj Phosphorylation,Regulates
R12707 T17652 T17651 prep of,Phosphorylation
R12708 T17653 T17652 pobj C/EBP,of
R12709 T17654 T17655 punct -,β
R12710 T17655 T17651 conj β,Phosphorylation
R12711 T17656 T17655 prep at,β
R12712 T17657 T17656 pobj Serine,at
R12713 T17658 T17657 nummod 64,Serine
R12714 T17659 T17660 advmod negatively,Regulates
R12715 T17660 T17660 ROOT Regulates,Regulates
R12718 T17663 T17664 compound Promoter,Activity

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T16735 94-102 NN denotes Activity
T16734 85-93 NN denotes Promoter
T16733 76-84 NN denotes SerpinB2
T16732 61-75 JJ denotes LPS-stimulated
T16731 51-60 VB denotes Regulates
T16730 40-50 RB denotes negatively
T16729 37-39 CD denotes 64
T16728 30-36 NN denotes Serine
T16727 27-29 IN denotes at
T16726 19-26 NN denotes C/EBP-β
T16725 16-18 IN denotes of
T16724 0-15 NN denotes Phosphorylation
R12095 T16724 T16725 arg1Of Phosphorylation,of
R12096 T16724 T16727 arg1Of Phosphorylation,at
R12097 T16724 T16731 arg1Of Phosphorylation,Regulates
R12098 T16726 T16725 arg2Of C/EBP-β,of
R12099 T16728 T16727 arg2Of Serine,at
R12100 T16728 T16729 arg1Of Serine,64
R12101 T16731 T16730 arg1Of Regulates,negatively
R12102 T16735 T16731 arg2Of Activity,Regulates
R12103 T16735 T16732 arg1Of Activity,LPS-stimulated
R12104 T16735 T16733 arg1Of Activity,SerpinB2
R12105 T16735 T16734 arg1Of Activity,Promoter

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T16611 76-84 Protein denotes SerpinB2
T16610 19-26 Protein denotes C/EBP-β

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T17198 76-84 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T17182 19-26 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β

GO-BP

Id Subject Object Predicate Lexical cue
T16650 0-15 http://purl.obolibrary.org/obo/GO_0016310 denotes Phosphorylation

sentences

Id Subject Object Predicate Lexical cue
T16492 0-102 Sentence denotes Phosphorylation of C/EBP-β at Serine 64 negatively Regulates LPS-stimulated SerpinB2 Promoter Activity
T232 0-102 Sentence denotes Phosphorylation of C/EBP-β at Serine 64 negatively Regulates LPS-stimulated SerpinB2 Promoter Activity

simple1

Id Subject Object Predicate Lexical cue
T16685 76-84 Protein denotes SerpinB2
T16684 19-26 Protein denotes C/EBP-β

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T17106 76-84 Protein denotes SerpinB2
T17105 19-26 Protein denotes C/EBP-β
T17147 51-60 Regulation denotes Regulates
T17146 0-15 Phosphorylation denotes Phosphorylation
T17145 61-75 Positive_regulation denotes LPS-stimulated
R12446 T17105 T17146 themeOf C/EBP-β,Phosphorylation
R12447 T17106 T17145 themeOf SerpinB2,LPS-stimulated
R12482 T17145 T17147 themeOf LPS-stimulated,Regulates

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T17342 76-84 Protein denotes SerpinB2
T17341 19-26 Protein denotes C/EBP-β
T17381 0-15 Phosphorylation denotes Phosphorylation
R12554 T17341 T17381 themeOf C/EBP-β,Phosphorylation

DLUT931

Id Subject Object Predicate Lexical cue
T17259 61-75 Positive_regulation denotes LPS-stimulated
T17258 51-60 Regulation denotes Regulates
T17257 0-15 Phosphorylation denotes Phosphorylation
T17218 76-84 Protein denotes SerpinB2
T17217 19-26 Protein denotes C/EBP-β
R12494 T17217 T17257 themeOf C/EBP-β,Phosphorylation
R12495 T17218 T17258 themeOf SerpinB2,Regulates
R12496 T17218 T17259 themeOf SerpinB2,LPS-stimulated
R12526 T17257 T17258 causeOf Phosphorylation,Regulates
R12527 T17257 T17258 causeOf Phosphorylation,Regulates
R12528 T17259 T17258 themeOf LPS-stimulated,Regulates

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T17633 0-102 Regulation denotes Phosphorylation of C/EBP-β at Serine 64 negatively Regulates LPS-stimulated SerpinB2 Promoter Activity
T17629 61-102 Positive_regulation denotes LPS-stimulated SerpinB2 Promoter Activity
T17605 61-75 Entity denotes LPS-stimulated
T17590 76-93 Entity denotes SerpinB2 Promoter
T17577 76-84 Protein denotes SerpinB2
T17569 30-39 Entity denotes Serine 64
T17561 16-26 Protein denotes of C/EBP-β
R12686 T17590 T17577 partOf SerpinB2 Promoter,SerpinB2
R12690 T17605 T17629 causeOf LPS-stimulated,LPS-stimulated SerpinB2 Promoter Activity

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T17415 51-60 Regulation denotes Regulates
T17414 0-15 Phosphorylation denotes Phosphorylation
T17413 30-36 Entity denotes Serine
T17412 76-93 Protein denotes SerpinB2 Promoter
T17411 19-26 Protein denotes C/EBP-β
R12596 T17411 T17414 themeOf C/EBP-β,Phosphorylation
R12597 T17411 T17413 partOf C/EBP-β,Serine
R12598 T17413 T17414 Site Serine,Phosphorylation
R12599 T17414 T17415 themeOf Phosphorylation,Regulates

testone

Id Subject Object Predicate Lexical cue
T16345 0-15 Phosphorylation denotes Phosphorylation
T16306 76-84 Protein denotes SerpinB2
T16305 19-26 Protein denotes C/EBP-β

test3

Id Subject Object Predicate Lexical cue
T16421 76-84 Protein denotes SerpinB2
T16420 65-75 Positive_regulation denotes stimulated
T16419 51-60 Regulation denotes Regulates
T16418 19-26 Protein denotes C/EBP-β
T16417 0-15 Phosphorylation denotes Phosphorylation
T16378 76-84 Protein denotes SerpinB2
T16377 19-26 Protein denotes C/EBP-β
R11982 T16417 T16419 causeOf Phosphorylation,Regulates
R11983 T16418 T16417 themeOf C/EBP-β,Phosphorylation
R11984 T16420 T16419 themeOf stimulated,Regulates