PMC:3589482 / 36981-37100 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/3589482","sourcedb":"PMC","sourceid":"3589482","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3589482","text":"(A) The SerpinB2 proximal promoter is significantly activated in LPS-stimulated Cebpb+/+ MEFs and not in Cebpb−/− MEFs.","tracks":[{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T26783","span":{"begin":118,"end":119},"obj":"."},{"id":"T26782","span":{"begin":114,"end":118},"obj":"NNS"},{"id":"T26781","span":{"begin":112,"end":113},"obj":"CD"},{"id":"T26780","span":{"begin":111,"end":112},"obj":"VBD"},{"id":"T26779","span":{"begin":110,"end":111},"obj":"NNP"},{"id":"T26778","span":{"begin":105,"end":110},"obj":"NNP"},{"id":"T26777","span":{"begin":102,"end":104},"obj":"IN"},{"id":"T26776","span":{"begin":98,"end":101},"obj":"RB"},{"id":"T26775","span":{"begin":94,"end":97},"obj":"CC"},{"id":"T26774","span":{"begin":89,"end":93},"obj":"NNS"},{"id":"T26773","span":{"begin":87,"end":88},"obj":"CD"},{"id":"T26772","span":{"begin":86,"end":87},"obj":"VBD"},{"id":"T26771","span":{"begin":85,"end":86},"obj":"NNP"},{"id":"T26770","span":{"begin":80,"end":85},"obj":"NNP"},{"id":"T26769","span":{"begin":65,"end":79},"obj":"JJ"},{"id":"T26768","span":{"begin":62,"end":64},"obj":"IN"},{"id":"T26767","span":{"begin":52,"end":61},"obj":"VBN"},{"id":"T26766","span":{"begin":38,"end":51},"obj":"RB"},{"id":"T26765","span":{"begin":35,"end":37},"obj":"VBZ"},{"id":"T26764","span":{"begin":26,"end":34},"obj":"NN"},{"id":"T26763","span":{"begin":17,"end":25},"obj":"JJ"},{"id":"T26762","span":{"begin":8,"end":16},"obj":"JJ"},{"id":"T26761","span":{"begin":4,"end":7},"obj":"DT"},{"id":"T26760","span":{"begin":2,"end":3},"obj":"-RRB-"},{"id":"T26759","span":{"begin":1,"end":2},"obj":"NNP"},{"id":"T26758","span":{"begin":0,"end":1},"obj":"-LRB-"}],"relations":[{"id":"R18896","pred":"punct","subj":"T26758","obj":"T26759"},{"id":"R18897","pred":"ROOT","subj":"T26759","obj":"T26759"},{"id":"R18898","pred":"punct","subj":"T26760","obj":"T26759"},{"id":"R18899","pred":"det","subj":"T26761","obj":"T26764"},{"id":"R18900","pred":"amod","subj":"T26762","obj":"T26764"},{"id":"R18901","pred":"amod","subj":"T26763","obj":"T26764"},{"id":"R18902","pred":"nsubjpass","subj":"T26764","obj":"T26767"},{"id":"R18903","pred":"auxpass","subj":"T26765","obj":"T26767"},{"id":"R18904","pred":"advmod","subj":"T26766","obj":"T26767"},{"id":"R18905","pred":"ROOT","subj":"T26767","obj":"T26767"},{"id":"R18906","pred":"prep","subj":"T26768","obj":"T26767"},{"id":"R18907","pred":"amod","subj":"T26769","obj":"T26771"},{"id":"R18908","pred":"compound","subj":"T26770","obj":"T26771"},{"id":"R18909","pred":"compound","subj":"T26771","obj":"T26780"},{"id":"R18910","pred":"dep","subj":"T26772","obj":"T26780"},{"id":"R18911","pred":"nummod","subj":"T26773","obj":"T26774"},{"id":"R18912","pred":"dobj","subj":"T26774","obj":"T26772"},{"id":"R18913","pred":"cc","subj":"T26775","obj":"T26774"},{"id":"R18914","pred":"neg","subj":"T26776","obj":"T26777"},{"id":"R18915","pred":"prep","subj":"T26777","obj":"T26772"},{"id":"R18916","pred":"compound","subj":"T26778","obj":"T26779"},{"id":"R18917","pred":"pobj","subj":"T26779","obj":"T26777"},{"id":"R18918","pred":"advcl","subj":"T26780","obj":"T26767"},{"id":"R18919","pred":"nummod","subj":"T26781","obj":"T26782"},{"id":"R18920","pred":"dobj","subj":"T26782","obj":"T26780"},{"id":"R18921","pred":"punct","subj":"T26783","obj":"T26767"}],"attributes":[{"subj":"T26783","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26782","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26781","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26780","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26779","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26778","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26777","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26776","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26775","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26774","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26773","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26772","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26771","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26770","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26769","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26768","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26767","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26766","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26765","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26764","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26763","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26762","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26761","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26760","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26759","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T26758","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T26246","span":{"begin":114,"end":118},"obj":"NN"},{"id":"T26245","span":{"begin":105,"end":113},"obj":"NN"},{"id":"T26244","span":{"begin":102,"end":104},"obj":"IN"},{"id":"T26243","span":{"begin":98,"end":101},"obj":"RB"},{"id":"T26242","span":{"begin":94,"end":97},"obj":"CC"},{"id":"T26241","span":{"begin":89,"end":93},"obj":"NN"},{"id":"T26240","span":{"begin":80,"end":88},"obj":"JJ"},{"id":"T26239","span":{"begin":65,"end":79},"obj":"JJ"},{"id":"T26238","span":{"begin":62,"end":64},"obj":"IN"},{"id":"T26237","span":{"begin":52,"end":61},"obj":"VB"},{"id":"T26236","span":{"begin":38,"end":51},"obj":"RB"},{"id":"T26235","span":{"begin":35,"end":37},"obj":"VB"},{"id":"T26234","span":{"begin":26,"end":34},"obj":"NN"},{"id":"T26233","span":{"begin":17,"end":25},"obj":"JJ"},{"id":"T26232","span":{"begin":8,"end":16},"obj":"NN"},{"id":"T26231","span":{"begin":4,"end":7},"obj":"DT"},{"id":"T26230","span":{"begin":2,"end":3},"obj":"-RRB-"},{"id":"T26229","span":{"begin":1,"end":2},"obj":"NN"},{"id":"T26228","span":{"begin":0,"end":1},"obj":"-LRB-"}],"relations":[{"id":"R18594","pred":"arg2Of","subj":"T26229","obj":"T26228"},{"id":"R18595","pred":"arg3Of","subj":"T26230","obj":"T26228"},{"id":"R18596","pred":"arg1Of","subj":"T26232","obj":"T26231"},{"id":"R18597","pred":"arg1Of","subj":"T26233","obj":"T26232"},{"id":"R18598","pred":"arg1Of","subj":"T26234","obj":"T26228"},{"id":"R18599","pred":"arg1Of","subj":"T26234","obj":"T26233"},{"id":"R18600","pred":"arg1Of","subj":"T26234","obj":"T26235"},{"id":"R18601","pred":"arg2Of","subj":"T26234","obj":"T26237"},{"id":"R18602","pred":"arg2Of","subj":"T26237","obj":"T26235"},{"id":"R18603","pred":"arg1Of","subj":"T26237","obj":"T26236"},{"id":"R18604","pred":"arg1Of","subj":"T26237","obj":"T26238"},{"id":"R18605","pred":"arg1Of","subj":"T26237","obj":"T26244"},{"id":"R18606","pred":"arg1Of","subj":"T26238","obj":"T26242"},{"id":"R18607","pred":"arg2Of","subj":"T26241","obj":"T26238"},{"id":"R18608","pred":"arg1Of","subj":"T26241","obj":"T26239"},{"id":"R18609","pred":"arg1Of","subj":"T26241","obj":"T26240"},{"id":"R18610","pred":"arg2Of","subj":"T26244","obj":"T26242"},{"id":"R18611","pred":"arg1Of","subj":"T26244","obj":"T26243"},{"id":"R18612","pred":"arg2Of","subj":"T26246","obj":"T26244"},{"id":"R18613","pred":"arg1Of","subj":"T26246","obj":"T26245"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T26246","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26245","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26244","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26243","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26242","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26241","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26240","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26239","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26238","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26237","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26236","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26235","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26234","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26233","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26232","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26231","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26230","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26229","pred":"source","obj":"pmc-enju-pas"},{"subj":"T26228","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T26137","span":{"begin":105,"end":110},"obj":"Protein"},{"id":"T26136","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T26135","span":{"begin":8,"end":16},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T26137","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T26136","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T26135","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T26502","span":{"begin":8,"end":16},"obj":"http://www.uniprot.org/uniprot/P05120"},{"id":"T26497","span":{"begin":105,"end":110},"obj":"http://www.uniprot.org/uniprot/P28033"},{"id":"T26496","span":{"begin":80,"end":85},"obj":"http://www.uniprot.org/uniprot/P28033"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T26502","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T26497","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T26496","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"sentences","denotations":[{"id":"T26087","span":{"begin":0,"end":119},"obj":"Sentence"},{"id":"T224","span":{"begin":0,"end":119},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T26087","pred":"source","obj":"sentences"},{"subj":"T224","pred":"source","obj":"sentences"}]},{"project":"simple1","denotations":[{"id":"T26198","span":{"begin":105,"end":110},"obj":"Protein"},{"id":"T26197","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T26196","span":{"begin":8,"end":16},"obj":"Protein"}],"attributes":[{"subj":"T26198","pred":"source","obj":"simple1"},{"subj":"T26197","pred":"source","obj":"simple1"},{"subj":"T26196","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T26456","span":{"begin":105,"end":110},"obj":"Protein"},{"id":"T26455","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T26454","span":{"begin":8,"end":16},"obj":"Protein"},{"id":"T26479","span":{"begin":52,"end":61},"obj":"Positive_regulation"}],"relations":[{"id":"R18796","pred":"themeOf","subj":"T26454","obj":"T26479"},{"id":"R18797","pred":"themeOf","subj":"T26455","obj":"T26479"}],"attributes":[{"subj":"T26456","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T26455","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T26454","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T26479","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T26606","span":{"begin":52,"end":61},"obj":"Positive_regulation"},{"id":"T26583","span":{"begin":105,"end":110},"obj":"Protein"},{"id":"T26582","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T26581","span":{"begin":8,"end":16},"obj":"Protein"}],"relations":[{"id":"R18833","pred":"themeOf","subj":"T26581","obj":"T26606"},{"id":"R18834","pred":"themeOf","subj":"T26582","obj":"T26606"}],"attributes":[{"subj":"T26606","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T26583","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T26582","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T26581","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T26517","span":{"begin":105,"end":110},"obj":"Protein"},{"id":"T26516","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T26515","span":{"begin":8,"end":16},"obj":"Protein"},{"id":"T26539","span":{"begin":52,"end":61},"obj":"Positive_regulation"}],"relations":[{"id":"R18809","pred":"themeOf","subj":"T26515","obj":"T26539"}],"attributes":[{"subj":"T26517","pred":"source","obj":"DLUT931"},{"subj":"T26516","pred":"source","obj":"DLUT931"},{"subj":"T26515","pred":"source","obj":"DLUT931"},{"subj":"T26539","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T26746","span":{"begin":65,"end":93},"obj":"Positive_regulation"},{"id":"T26735","span":{"begin":105,"end":110},"obj":"Protein"},{"id":"T26727","span":{"begin":4,"end":34},"obj":"Entity"},{"id":"T26726","span":{"begin":114,"end":118},"obj":"Protein"},{"id":"T26721","span":{"begin":65,"end":79},"obj":"Entity"},{"id":"T26699","span":{"begin":8,"end":16},"obj":"Protein"},{"id":"T26696","span":{"begin":65,"end":93},"obj":"Protein"}],"relations":[{"id":"R18877","pred":"themeOf","subj":"T26696","obj":"T26746"},{"id":"R18881","pred":"causeOf","subj":"T26721","obj":"T26746"},{"id":"R18882","pred":"partOf","subj":"T26727","obj":"T26699"}],"attributes":[{"subj":"T26746","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T26735","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T26727","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T26726","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T26721","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T26699","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T26696","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T26621","span":{"begin":52,"end":61},"obj":"Positive_regulation"},{"id":"T26620","span":{"begin":52,"end":61},"obj":"Positive_regulation"},{"id":"T26619","span":{"begin":52,"end":61},"obj":"Positive_regulation"},{"id":"T26618","span":{"begin":105,"end":118},"obj":"Protein"},{"id":"T26617","span":{"begin":80,"end":93},"obj":"Protein"},{"id":"T26616","span":{"begin":8,"end":34},"obj":"Protein"}],"relations":[{"id":"R18843","pred":"themeOf","subj":"T26616","obj":"T26619"},{"id":"R18844","pred":"themeOf","subj":"T26617","obj":"T26620"},{"id":"R18845","pred":"themeOf","subj":"T26618","obj":"T26621"}],"attributes":[{"subj":"T26621","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T26620","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T26619","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T26618","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T26617","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T26616","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"testone","denotations":[{"id":"T26000","span":{"begin":105,"end":110},"obj":"Protein"},{"id":"T25999","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T25998","span":{"begin":8,"end":16},"obj":"Protein"}],"attributes":[{"subj":"T26000","pred":"source","obj":"testone"},{"subj":"T25999","pred":"source","obj":"testone"},{"subj":"T25998","pred":"source","obj":"testone"}]},{"project":"test3","denotations":[{"id":"T26058","span":{"begin":105,"end":110},"obj":"Protein"},{"id":"T26057","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T26056","span":{"begin":8,"end":16},"obj":"Protein"},{"id":"T26031","span":{"begin":105,"end":110},"obj":"Protein"},{"id":"T26030","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T26029","span":{"begin":8,"end":16},"obj":"Protein"}],"attributes":[{"subj":"T26058","pred":"source","obj":"test3"},{"subj":"T26057","pred":"source","obj":"test3"},{"subj":"T26056","pred":"source","obj":"test3"},{"subj":"T26031","pred":"source","obj":"test3"},{"subj":"T26030","pred":"source","obj":"test3"},{"subj":"T26029","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#deec93","default":true},{"id":"pmc-enju-pas","color":"#e093ec"},{"id":"bionlp-st-ge-2016-test-proteins","color":"#93ecc6"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ecac93"},{"id":"sentences","color":"#9394ec"},{"id":"simple1","color":"#aeec93"},{"id":"BioNLP16_DUT","color":"#ec93c8"},{"id":"BioNLP16_Messiy","color":"#93e2ec"},{"id":"DLUT931","color":"#ecdc93"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#c293ec"},{"id":"bionlp-st-ge-2016-test-tees","color":"#93eca8"},{"id":"testone","color":"#ec9397"},{"id":"test3","color":"#93b1ec"}]}]}}