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PMC:3589482 / 36875-36980 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T26750 52-54 VBZ denotes is
T26749 50-51 NN denotes β
T26748 49-50 : denotes -
T26747 44-49 SYM denotes C/EBP
T26757 104-105 . denotes .
T26756 96-104 NN denotes activity
T26755 87-95 NN denotes promoter
T26754 78-86 JJ denotes proximal
T26753 69-77 NNP denotes SerpinB2
T26752 65-68 IN denotes for
T26751 55-64 JJ denotes necessary
R18885 T26747 T26749 amod C/EBP,β
R18886 T26748 T26749 punct -,β
R18887 T26749 T26750 nsubj β,is
R18888 T26750 T26750 ROOT is,is
R18889 T26751 T26750 acomp necessary,is
R18890 T26752 T26750 prep for,is
R18891 T26753 T26756 nmod SerpinB2,activity
R18892 T26754 T26756 amod proximal,activity
R18893 T26755 T26756 compound promoter,activity
R18894 T26756 T26752 pobj activity,for
R18895 T26757 T26750 punct .,is

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T26227 96-104 NN denotes activity
T26226 87-95 NN denotes promoter
T26225 78-86 JJ denotes proximal
T26224 69-77 NN denotes SerpinB2
T26223 65-68 IN denotes for
T26222 55-64 JJ denotes necessary
T26221 52-54 VB denotes is
T26220 44-51 NN denotes C/EBP-β
R18586 T26220 T26221 arg1Of C/EBP-β,is
R18587 T26220 T26222 arg1Of C/EBP-β,necessary
R18588 T26222 T26221 arg2Of necessary,is
R18589 T26222 T26223 arg1Of necessary,for
R18590 T26227 T26223 arg2Of activity,for
R18591 T26227 T26224 arg1Of activity,SerpinB2
R18592 T26227 T26225 arg1Of activity,proximal
R18593 T26227 T26226 arg1Of activity,promoter

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T26134 69-77 Protein denotes SerpinB2
T26133 44-51 Protein denotes C/EBP-β

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T26501 69-77 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T26490 44-51 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β

sentences

Id Subject Object Predicate Lexical cue
T26086 44-105 Sentence denotes C/EBP-β is necessary for SerpinB2 proximal promoter activity.
T223 0-105 Sentence denotes 10.1371/journal.pone.0057855.g008 Figure 8 C/EBP-β is necessary for SerpinB2 proximal promoter activity.

simple1

Id Subject Object Predicate Lexical cue
T26195 69-77 Protein denotes SerpinB2
T26194 44-51 Protein denotes C/EBP-β

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T26453 69-77 Protein denotes SerpinB2
T26452 44-51 Protein denotes C/EBP-β
T26478 55-64 Positive_regulation denotes necessary
R18794 T26452 T26478 causeOf C/EBP-β,necessary
R18795 T26453 T26478 themeOf SerpinB2,necessary

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T26605 55-64 Positive_regulation denotes necessary
T26580 69-77 Protein denotes SerpinB2
T26579 44-51 Protein denotes C/EBP-β
R18832 T26579 T26605 themeOf C/EBP-β,necessary

DLUT931

Id Subject Object Predicate Lexical cue
T26514 69-77 Protein denotes SerpinB2
T26513 44-51 Protein denotes C/EBP-β

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T26737 69-77 Protein denotes SerpinB2
T26728 69-95 Entity denotes SerpinB2 proximal promoter
T26703 44-51 Protein denotes C/EBP-β
R18883 T26728 T26737 partOf SerpinB2 proximal promoter,SerpinB2

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T26615 55-64 Positive_regulation denotes necessary
T26614 69-95 Protein denotes SerpinB2 proximal promoter
T26613 44-51 Protein denotes C/EBP-β
R18841 T26613 T26615 causeOf C/EBP-β,necessary
R18842 T26614 T26615 themeOf SerpinB2 proximal promoter,necessary

testone

Id Subject Object Predicate Lexical cue
T25997 69-77 Protein denotes SerpinB2
T25996 44-51 Protein denotes C/EBP-β

test3

Id Subject Object Predicate Lexical cue
T26055 69-77 Protein denotes SerpinB2
T26054 55-64 Positive_regulation denotes necessary
T26053 44-51 Protein denotes C/EBP-β
T26028 69-77 Protein denotes SerpinB2
T26027 44-51 Protein denotes C/EBP-β
R18565 T26053 T26054 causeOf C/EBP-β,necessary