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PMC:3589482 / 3627-3828 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2865 200-201 . denotes .
T2864 193-200 NN denotes release
T2863 184-192 NN denotes cytokine
T2862 174-183 VBG denotes including
T2861 172-173 , denotes ,
T2860 163-172 NNS denotes responses
T2859 156-162 JJ denotes immune
T2858 149-155 NN denotes innate
T2857 146-148 IN denotes of
T2856 135-145 NN denotes initiation
T2855 131-134 DT denotes the
T2854 128-130 IN denotes in
T2853 123-127 NN denotes role
T2852 115-122 JJ denotes central
T2851 113-114 DT denotes a
T2850 107-112 VBZ denotes plays
T2849 103-106 CC denotes and
T2848 94-102 NNS denotes products
T2847 84-93 JJ denotes microbial
T2846 78-83 JJ denotes other
T2845 74-77 CC denotes and
T2844 70-73 NNP denotes LPS
T2843 67-69 IN denotes of
T2842 55-66 NN denotes recognition
T2841 51-54 DT denotes the
T2840 47-50 IN denotes for
T2839 35-46 JJ denotes responsible
T2838 32-34 VBZ denotes is
T2837 30-31 -RRB- denotes )
T2836 26-30 CD denotes TLR4
T2835 25-26 -LRB- denotes (
T2834 23-24 CD denotes 4
T2833 14-22 NN denotes receptor
T2832 4-13 JJ denotes toll-like
T2831 0-3 DT denotes The
R1924 T2831 T2838 det The,is
R1925 T2832 T2833 amod toll-like,receptor
R1927 T2833 T2838 nsubj receptor,is
R1928 T2834 T2833 nummod 4,receptor
R1930 T2835 T2833 punct (,receptor
R1931 T2836 T2833 appos TLR4,receptor
R1932 T2837 T2833 punct ),receptor
R1934 T2838 T2838 ROOT is,is
R1935 T2839 T2838 acomp responsible,is
R1936 T2840 T2839 prep for,responsible
R1938 T2841 T2842 det the,recognition
R1939 T2842 T2840 pobj recognition,for
R1941 T2843 T2842 prep of,recognition
R1942 T2844 T2843 pobj LPS,of
R1943 T2845 T2844 cc and,LPS
R1945 T2846 T2848 amod other,products
R1946 T2847 T2848 amod microbial,products
R1947 T2848 T2844 conj products,LPS
R1949 T2849 T2848 cc and,products
R1950 T2850 T2838 conj plays,is
R1952 T2851 T2853 det a,role
R1953 T2852 T2853 amod central,role
R1954 T2853 T2850 dobj role,plays
R1956 T2854 T2853 prep in,role
R1957 T2855 T2856 det the,initiation
R1958 T2856 T2854 pobj initiation,in
R1959 T2857 T2856 prep of,initiation
R1960 T2858 T2860 amod innate,responses
R1961 T2859 T2860 amod immune,responses
R1963 T2860 T2857 pobj responses,of
R1964 T2861 T2860 punct ",",responses
R1965 T2862 T2860 prep including,responses
R1966 T2863 T2864 compound cytokine,release
R1968 T2864 T2862 pobj release,including
R1969 T2865 T2838 punct .,is

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1792 193-200 NN denotes release
T1791 184-192 NN denotes cytokine
T1790 174-183 VB denotes including
T1789 172-173 -COMMA- denotes ,
T1788 163-172 NN denotes responses
T1787 156-162 JJ denotes immune
T1786 149-155 JJ denotes innate
T1785 146-148 IN denotes of
T1784 135-145 NN denotes initiation
T1783 131-134 DT denotes the
T1782 128-130 IN denotes in
T1781 123-127 NN denotes role
T1780 115-122 JJ denotes central
T1779 113-114 DT denotes a
T1778 107-112 VB denotes plays
T1777 103-106 CC denotes and
T1776 94-102 NN denotes products
T1775 84-93 JJ denotes microbial
T1774 78-83 JJ denotes other
T1773 74-77 CC denotes and
T1772 70-73 NN denotes LPS
T1771 67-69 IN denotes of
T1770 55-66 NN denotes recognition
T1769 51-54 DT denotes the
T1768 47-50 IN denotes for
T1767 35-46 JJ denotes responsible
T1766 32-34 VB denotes is
T1765 30-31 -RRB- denotes )
T1764 26-30 NN denotes TLR4
T1763 25-26 -LRB- denotes (
T1762 23-24 CD denotes 4
T1761 14-22 NN denotes receptor
T1760 4-13 JJ denotes toll-like
T1759 0-3 DT denotes The
R1164 T1761 T1759 arg1Of receptor,The
R1165 T1761 T1760 arg1Of receptor,toll-like
R1166 T1761 T1762 arg1Of receptor,4
R1167 T1761 T1763 arg1Of receptor,(
R1168 T1761 T1766 arg1Of receptor,is
R1169 T1761 T1767 arg1Of receptor,responsible
R1170 T1761 T1778 arg1Of receptor,plays
R1171 T1764 T1763 arg2Of TLR4,(
R1172 T1765 T1763 arg3Of ),(
R1173 T1766 T1777 arg1Of is,and
R1174 T1767 T1766 arg2Of responsible,is
R1175 T1767 T1768 arg1Of responsible,for
R1176 T1770 T1768 arg2Of recognition,for
R1177 T1770 T1769 arg1Of recognition,the
R1178 T1770 T1771 arg1Of recognition,of
R1179 T1772 T1773 arg1Of LPS,and
R1180 T1773 T1771 arg2Of and,of
R1181 T1776 T1773 arg2Of products,and
R1182 T1776 T1774 arg1Of products,other
R1183 T1776 T1775 arg1Of products,microbial
R1184 T1778 T1777 arg2Of plays,and
R1185 T1778 T1782 arg1Of plays,in
R1186 T1781 T1778 arg2Of role,plays
R1187 T1781 T1779 arg1Of role,a
R1188 T1781 T1780 arg1Of role,central
R1189 T1784 T1782 arg2Of initiation,in
R1190 T1784 T1783 arg1Of initiation,the
R1191 T1784 T1785 arg1Of initiation,of
R1192 T1788 T1785 arg2Of responses,of
R1193 T1788 T1786 arg1Of responses,innate
R1194 T1788 T1787 arg1Of responses,immune
R1195 T1788 T1789 arg1Of responses,","
R1196 T1788 T1790 arg1Of responses,including
R1197 T1792 T1790 arg2Of release,including
R1198 T1792 T1791 arg1Of release,cytokine

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1309 26-30 Protein denotes TLR4
T1308 4-24 Protein denotes toll-like receptor 4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2121 26-30 http://www.uniprot.org/uniprot/O00206 denotes TLR4

UBERON-AE

Id Subject Object Predicate Lexical cue
T1202 115-122 http://purl.obolibrary.org/obo/UBERON_0012131 denotes central

GO-BP

Id Subject Object Predicate Lexical cue
T1343 156-172 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses
T1339 149-172 http://purl.obolibrary.org/obo/GO_0045824 denotes innate immune responses
T1337 149-172 http://purl.obolibrary.org/obo/GO_0045089 denotes innate immune responses
T1335 149-172 http://purl.obolibrary.org/obo/GO_0002218 denotes innate immune responses
T1333 149-172 http://purl.obolibrary.org/obo/GO_0045088 denotes innate immune responses
T1331 149-172 http://purl.obolibrary.org/obo/GO_0002227 denotes innate immune responses
T1329 149-172 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune responses

sentences

Id Subject Object Predicate Lexical cue
T1215 0-201 Sentence denotes The toll-like receptor 4 (TLR4) is responsible for the recognition of LPS and other microbial products and plays a central role in the initiation of innate immune responses, including cytokine release.
T25 0-201 Sentence denotes The toll-like receptor 4 (TLR4) is responsible for the recognition of LPS and other microbial products and plays a central role in the initiation of innate immune responses, including cytokine release.

simple1

Id Subject Object Predicate Lexical cue
T1407 26-30 Protein denotes TLR4
T1406 4-24 Protein denotes toll-like receptor 4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T2065 26-30 Protein denotes TLR4
T2064 4-24 Protein denotes toll-like receptor 4

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2224 26-30 Protein denotes TLR4
T2223 4-24 Protein denotes toll-like receptor 4

DLUT931

Id Subject Object Predicate Lexical cue
T2143 26-30 Protein denotes TLR4
T2142 4-24 Protein denotes toll-like receptor 4

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2484 131-200 Regulation denotes the initiation of innate immune responses, including cytokine release
T2442 26-30 Protein denotes TLR4
T2408 184-192 Protein denotes cytokine
T2398 70-73 Entity denotes LPS
T2388 0-31 Protein denotes The toll-like receptor 4 (TLR4)
R1615 T2408 T2484 themeOf cytokine,"the initiation of innate immune responses, including cytokine release"

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T2278 184-200 Protein denotes cytokine release

testone

Id Subject Object Predicate Lexical cue
T1104 26-30 Protein denotes TLR4
T1103 4-24 Protein denotes toll-like receptor 4
R746 T1104 T1103 equivalentTo TLR4,toll-like receptor 4

test3

Id Subject Object Predicate Lexical cue
T1172 26-30 Protein denotes TLR4
T1171 4-24 Protein denotes toll-like receptor 4
T1145 26-30 Protein denotes TLR4
T1144 4-24 Protein denotes toll-like receptor 4
R757 T1172 T1171 equivalentTo TLR4,toll-like receptor 4