PMC:3589482 / 35760-35996
Annnotations
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25944 | 235-236 | . | denotes | . |
T25943 | 228-235 | NN | denotes | control |
T25942 | 223-227 | NNP | denotes | rIgG |
T25941 | 219-222 | DT | denotes | the |
T25940 | 215-218 | CC | denotes | and |
T25939 | 213-214 | , | denotes | , |
T25938 | 212-213 | -RRB- | denotes | ) |
T25937 | 208-212 | CD | denotes | T217 |
T25936 | 207-208 | -LRB- | denotes | ( |
T25935 | 205-206 | NN | denotes | β |
T25934 | 204-205 | : | denotes | - |
T25933 | 197-204 | NNP | denotes | p-C/EBP |
T25932 | 195-196 | , | denotes | , |
T25931 | 194-195 | NN | denotes | β |
T25915 | 99-103 | NNP | denotes | ChIP |
T25914 | 95-98 | DT | denotes | the |
T25913 | 92-94 | IN | denotes | of |
T25912 | 80-91 | NN | denotes | specificity |
T25911 | 76-79 | DT | denotes | the |
T25910 | 73-75 | IN | denotes | of |
T25909 | 62-72 | JJ | denotes | indicative |
T25908 | 60-61 | , | denotes | , |
T25907 | 53-60 | NN | denotes | control |
T25906 | 49-52 | NNP | denotes | IgG |
T25905 | 42-48 | NN | denotes | rabbit |
T25904 | 38-41 | DT | denotes | the |
T25903 | 32-37 | VBG | denotes | using |
T25902 | 23-31 | VBN | denotes | detected |
T25901 | 19-22 | VBD | denotes | was |
T25900 | 8-18 | NN | denotes | background |
T25899 | 0-7 | JJ | denotes | Minimal |
T25930 | 193-194 | : | denotes | - |
T25929 | 188-193 | NNP | denotes | C/EBP |
T25928 | 180-187 | IN | denotes | against |
T25927 | 169-179 | NNS | denotes | antibodies |
T25926 | 164-168 | IN | denotes | with |
T25925 | 145-163 | VBN | denotes | immunoprecipitated |
T25924 | 135-144 | NN | denotes | chromatin |
T25923 | 132-134 | IN | denotes | of |
T25922 | 123-131 | NN | denotes | analysis |
T25921 | 118-122 | NNP | denotes | qPCR |
T25920 | 116-117 | -RRB- | denotes | ) |
T25919 | 115-116 | NNP | denotes | B |
T25918 | 114-115 | -LRB- | denotes | ( |
T25917 | 112-113 | . | denotes | . |
T25916 | 104-112 | NN | denotes | reaction |
R18498 | T25899 | T25900 | amod | Minimal,background |
R18499 | T25900 | T25902 | nsubjpass | background,detected |
R18500 | T25901 | T25902 | auxpass | was,detected |
R18501 | T25902 | T25902 | ROOT | detected,detected |
R18502 | T25903 | T25902 | advcl | using,detected |
R18503 | T25904 | T25907 | det | the,control |
R18504 | T25905 | T25907 | compound | rabbit,control |
R18505 | T25906 | T25907 | compound | IgG,control |
R18506 | T25907 | T25903 | dobj | control,using |
R18507 | T25908 | T25902 | punct | ",",detected |
R18508 | T25909 | T25902 | advcl | indicative,detected |
R18509 | T25910 | T25909 | prep | of,indicative |
R18510 | T25911 | T25912 | det | the,specificity |
R18511 | T25912 | T25910 | pobj | specificity,of |
R18512 | T25913 | T25912 | prep | of,specificity |
R18513 | T25914 | T25916 | det | the,reaction |
R18514 | T25915 | T25916 | compound | ChIP,reaction |
R18515 | T25916 | T25913 | pobj | reaction,of |
R18516 | T25917 | T25902 | punct | .,detected |
R18517 | T25918 | T25922 | punct | (,analysis |
R18518 | T25919 | T25922 | nmod | B,analysis |
R18519 | T25920 | T25919 | punct | ),B |
R18520 | T25921 | T25922 | compound | qPCR,analysis |
R18521 | T25922 | T25922 | ROOT | analysis,analysis |
R18522 | T25923 | T25922 | prep | of,analysis |
R18523 | T25924 | T25923 | pobj | chromatin,of |
R18524 | T25925 | T25922 | dep | immunoprecipitated,analysis |
R18525 | T25926 | T25925 | prep | with,immunoprecipitated |
R18526 | T25927 | T25926 | pobj | antibodies,with |
R18527 | T25928 | T25927 | prep | against,antibodies |
R18528 | T25929 | T25928 | pobj | C/EBP,against |
R18529 | T25930 | T25931 | punct | -,β |
R18530 | T25931 | T25922 | appos | β,analysis |
R18531 | T25932 | T25931 | punct | ",",β |
R18532 | T25933 | T25935 | compound | p-C/EBP,β |
R18533 | T25934 | T25935 | punct | -,β |
R18534 | T25935 | T25931 | appos | β,β |
R18535 | T25936 | T25935 | punct | (,β |
R18536 | T25937 | T25935 | appos | T217,β |
R18537 | T25938 | T25935 | punct | ),β |
R18538 | T25939 | T25931 | punct | ",",β |
R18539 | T25940 | T25931 | cc | and,β |
R18540 | T25941 | T25943 | det | the,control |
R18541 | T25942 | T25943 | compound | rIgG,control |
R18542 | T25943 | T25931 | conj | control,β |
R18543 | T25944 | T25922 | punct | .,analysis |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25565 | 228-235 | NN | denotes | control |
T25564 | 223-227 | NN | denotes | rIgG |
T25563 | 219-222 | DT | denotes | the |
T25562 | 215-218 | CC | denotes | and |
T25561 | 213-214 | -COMMA- | denotes | , |
T25560 | 212-213 | -RRB- | denotes | ) |
T25559 | 208-212 | NN | denotes | T217 |
T25558 | 207-208 | -LRB- | denotes | ( |
T25557 | 197-206 | NN | denotes | p-C/EBP-β |
T25556 | 195-196 | -COMMA- | denotes | , |
T25555 | 188-195 | NN | denotes | C/EBP-β |
T25554 | 180-187 | IN | denotes | against |
T25553 | 169-179 | NN | denotes | antibodies |
T25552 | 164-168 | IN | denotes | with |
T25551 | 145-163 | VB | denotes | immunoprecipitated |
T25550 | 135-144 | NN | denotes | chromatin |
T25549 | 132-134 | IN | denotes | of |
T25548 | 123-131 | NN | denotes | analysis |
T25547 | 118-122 | NN | denotes | qPCR |
T25546 | 116-117 | -RRB- | denotes | ) |
T25545 | 115-116 | NN | denotes | B |
T25544 | 114-115 | -LRB- | denotes | ( |
T25543 | 104-113 | NN | denotes | reaction. |
T25542 | 99-103 | NN | denotes | ChIP |
T25541 | 95-98 | DT | denotes | the |
T25540 | 92-94 | IN | denotes | of |
T25539 | 80-91 | NN | denotes | specificity |
T25538 | 76-79 | DT | denotes | the |
T25537 | 73-75 | IN | denotes | of |
T25536 | 62-72 | JJ | denotes | indicative |
T25535 | 60-61 | -COMMA- | denotes | , |
T25534 | 53-60 | NN | denotes | control |
T25533 | 49-52 | NN | denotes | IgG |
T25532 | 42-48 | NN | denotes | rabbit |
T25531 | 38-41 | DT | denotes | the |
T25530 | 32-37 | VB | denotes | using |
T25529 | 23-31 | VB | denotes | detected |
T25528 | 19-22 | VB | denotes | was |
T25527 | 8-18 | NN | denotes | background |
T25526 | 0-7 | JJ | denotes | Minimal |
R18267 | T25527 | T25526 | arg1Of | background,Minimal |
R18268 | T25527 | T25528 | arg1Of | background,was |
R18269 | T25527 | T25529 | arg2Of | background,detected |
R18270 | T25527 | T25530 | arg1Of | background,using |
R18271 | T25529 | T25528 | arg2Of | detected,was |
R18272 | T25530 | T25529 | arg3Of | using,detected |
R18273 | T25530 | T25535 | arg1Of | using,"," |
R18274 | T25530 | T25536 | arg1Of | using,indicative |
R18275 | T25534 | T25530 | arg2Of | control,using |
R18276 | T25534 | T25531 | arg1Of | control,the |
R18277 | T25534 | T25532 | arg1Of | control,rabbit |
R18278 | T25534 | T25533 | arg1Of | control,IgG |
R18279 | T25536 | T25537 | arg1Of | indicative,of |
R18280 | T25539 | T25537 | arg2Of | specificity,of |
R18281 | T25539 | T25538 | arg1Of | specificity,the |
R18282 | T25539 | T25540 | arg1Of | specificity,of |
R18283 | T25539 | T25549 | arg1Of | specificity,of |
R18284 | T25545 | T25544 | arg2Of | B,( |
R18285 | T25546 | T25544 | arg3Of | ),( |
R18286 | T25548 | T25540 | arg2Of | analysis,of |
R18287 | T25548 | T25541 | arg1Of | analysis,the |
R18288 | T25548 | T25542 | arg1Of | analysis,ChIP |
R18289 | T25548 | T25543 | arg1Of | analysis,reaction. |
R18290 | T25548 | T25544 | arg1Of | analysis,( |
R18291 | T25548 | T25547 | arg1Of | analysis,qPCR |
R18292 | T25550 | T25549 | arg2Of | chromatin,of |
R18293 | T25550 | T25551 | arg2Of | chromatin,immunoprecipitated |
R18294 | T25551 | T25552 | arg1Of | immunoprecipitated,with |
R18295 | T25553 | T25552 | arg2Of | antibodies,with |
R18296 | T25553 | T25554 | arg1Of | antibodies,against |
R18297 | T25555 | T25556 | arg1Of | C/EBP-β,"," |
R18298 | T25555 | T25562 | arg1Of | C/EBP-β,and |
R18299 | T25557 | T25556 | arg2Of | p-C/EBP-β,"," |
R18300 | T25557 | T25558 | arg1Of | p-C/EBP-β,( |
R18301 | T25559 | T25558 | arg2Of | T217,( |
R18302 | T25560 | T25558 | arg3Of | ),( |
R18303 | T25562 | T25554 | arg2Of | and,against |
R18304 | T25562 | T25561 | arg1Of | and,"," |
R18305 | T25565 | T25562 | arg2Of | control,and |
R18306 | T25565 | T25563 | arg1Of | control,the |
R18307 | T25565 | T25564 | arg1Of | control,rIgG |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25359 | 197-213 | Protein | denotes | p-C/EBP-β (T217) |
T25358 | 188-195 | Protein | denotes | C/EBP-β |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25611 | 199-206 | http://www.uniprot.org/uniprot/P28033 | denotes | C/EBP-β |
T25610 | 188-195 | http://www.uniprot.org/uniprot/P28033 | denotes | C/EBP-β |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25369 | 169-179 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25381 | 169-179 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T25378 | 169-179 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T25375 | 135-144 | http://purl.obolibrary.org/obo/GO_0000785 | denotes | chromatin |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25327 | 0-236 | Sentence | denotes | Minimal background was detected using the rabbit IgG control, indicative of the specificity of the ChIP reaction. (B) qPCR analysis of chromatin immunoprecipitated with antibodies against C/EBP-β, p-C/EBP-β (T217), and the rIgG control. |
T217 | 0-236 | Sentence | denotes | Minimal background was detected using the rabbit IgG control, indicative of the specificity of the ChIP reaction. (B) qPCR analysis of chromatin immunoprecipitated with antibodies against C/EBP-β, p-C/EBP-β (T217), and the rIgG control. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25393 | 197-213 | Protein | denotes | p-C/EBP-β (T217) |
T25392 | 188-195 | Protein | denotes | C/EBP-β |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25600 | 197-213 | Protein | denotes | p-C/EBP-β (T217) |
T25599 | 188-195 | Protein | denotes | C/EBP-β |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25655 | 197-213 | Protein | denotes | p-C/EBP-β (T217) |
T25654 | 188-195 | Protein | denotes | C/EBP-β |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25626 | 197-213 | Protein | denotes | p-C/EBP-β (T217) |
T25625 | 188-195 | Protein | denotes | C/EBP-β |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25740 | 219-235 | Regulation | denotes | the rIgG control |
T25736 | 132-179 | Entity | denotes | of chromatin immunoprecipitated with antibodies |
T25728 | 223-227 | Protein | denotes | rIgG |
T25727 | 169-179 | Entity | denotes | antibodies |
T25722 | 119-122 | Protein | denotes | PCR |
T25715 | 208-212 | Entity | denotes | T217 |
T25712 | 188-195 | Protein | denotes | C/EBP-β |
T25706 | 197-213 | Protein | denotes | p-C/EBP-β (T217) |
R18339 | T25728 | T25740 | themeOf | rIgG,the rIgG control |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25680 | 223-235 | Protein | denotes | rIgG control |
T25679 | 208-212 | Protein | denotes | T217 |
T25678 | 188-206 | Protein | denotes | C/EBP-β, p-C/EBP-β |
T25677 | 99-103 | Protein | denotes | ChIP |
T25676 | 49-52 | Protein | denotes | IgG |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25286 | 197-213 | Protein | denotes | p-C/EBP-β (T217) |
T25285 | 188-195 | Protein | denotes | C/EBP-β |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25320 | 197-214 | Protein | denotes | p-C/EBP-β (T217), |
T25319 | 188-195 | Protein | denotes | C/EBP-β |
T25304 | 197-213 | Protein | denotes | p-C/EBP-β (T217) |
T25303 | 188-195 | Protein | denotes | C/EBP-β |