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PMC:3589482 / 35656-35759 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T25898 102-103 . denotes .
T25897 91-102 NN denotes stimulation
T25896 87-90 NNP denotes LPS
T25895 77-86 VBG denotes following
T25894 63-76 NN denotes transcription
T25893 56-62 JJ denotes active
T25892 47-55 VBZ denotes suggests
T25891 38-46 NN denotes promoter
T25890 29-37 NNP denotes SerpinB2
T25889 25-28 DT denotes the
T25888 22-24 TO denotes to
T25887 15-21 NNP denotes RNAPII
T25886 12-14 IN denotes of
T25885 0-11 NN denotes Recruitment
R18484 T25885 T25892 nsubj Recruitment,suggests
R18485 T25886 T25885 prep of,Recruitment
R18486 T25887 T25886 pobj RNAPII,of
R18487 T25888 T25885 prep to,Recruitment
R18488 T25889 T25891 det the,promoter
R18489 T25890 T25891 compound SerpinB2,promoter
R18490 T25891 T25888 pobj promoter,to
R18491 T25892 T25892 ROOT suggests,suggests
R18492 T25893 T25894 amod active,transcription
R18493 T25894 T25892 dobj transcription,suggests
R18494 T25895 T25894 acl following,transcription
R18495 T25896 T25897 compound LPS,stimulation
R18496 T25897 T25895 dobj stimulation,following
R18497 T25898 T25892 punct .,suggests

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T25525 91-102 NN denotes stimulation
T25524 87-90 NN denotes LPS
T25523 77-86 VB denotes following
T25522 63-76 NN denotes transcription
T25521 56-62 JJ denotes active
T25520 47-55 VB denotes suggests
T25519 38-46 NN denotes promoter
T25518 29-37 NN denotes SerpinB2
T25517 25-28 DT denotes the
T25516 22-24 TO denotes to
T25515 15-21 NN denotes RNAPII
T25514 12-14 IN denotes of
T25513 0-11 NN denotes Recruitment
R18255 T25513 T25514 arg1Of Recruitment,of
R18256 T25513 T25516 arg1Of Recruitment,to
R18257 T25513 T25520 arg1Of Recruitment,suggests
R18258 T25515 T25514 arg2Of RNAPII,of
R18259 T25519 T25516 arg2Of promoter,to
R18260 T25519 T25517 arg1Of promoter,the
R18261 T25519 T25518 arg1Of promoter,SerpinB2
R18262 T25520 T25523 arg1Of suggests,following
R18263 T25522 T25520 arg2Of transcription,suggests
R18264 T25522 T25521 arg1Of transcription,active
R18265 T25525 T25523 arg2Of stimulation,following
R18266 T25525 T25524 arg1Of stimulation,LPS

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T25357 29-37 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T25615 29-37 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T25362 63-76 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

sentences

Id Subject Object Predicate Lexical cue
T25326 0-103 Sentence denotes Recruitment of RNAPII to the SerpinB2 promoter suggests active transcription following LPS stimulation.
T216 0-103 Sentence denotes Recruitment of RNAPII to the SerpinB2 promoter suggests active transcription following LPS stimulation.

simple1

Id Subject Object Predicate Lexical cue
T25391 29-37 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T25604 0-11 Binding denotes Recruitment
T25598 29-37 Protein denotes SerpinB2
R18323 T25598 T25604 themeOf SerpinB2,Recruitment

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T25659 0-11 Binding denotes Recruitment
T25653 29-37 Protein denotes SerpinB2
R18333 T25653 T25659 themeOf SerpinB2,Recruitment

DLUT931

Id Subject Object Predicate Lexical cue
T25629 0-11 Binding denotes Recruitment
T25624 29-37 Protein denotes SerpinB2
T25630 77-86 Positive_regulation denotes following
R18326 T25624 T25629 themeOf SerpinB2,Recruitment
R18327 T25629 T25630 themeOf Recruitment,following

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T25741 25-102 Transcription denotes the SerpinB2 promoter suggests active transcription following LPS stimulation
T25737 87-90 Entity denotes LPS
T25734 38-46 Entity denotes promoter
T25730 25-55 Protein denotes the SerpinB2 promoter suggests
R18340 T25730 T25741 themeOf the SerpinB2 promoter suggests,the SerpinB2 promoter suggests active transcription following LPS stimulation

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T25675 0-11 Binding denotes Recruitment
T25674 29-46 Protein denotes SerpinB2 promoter
T25673 15-21 Protein denotes RNAPII
R18334 T25673 T25675 themeOf RNAPII,Recruitment
R18335 T25674 T25675 themeOf SerpinB2 promoter,Recruitment

testone

Id Subject Object Predicate Lexical cue
T25293 63-76 Transcription denotes transcription
T25292 38-46 Entity denotes promoter
T25291 0-11 Binding denotes Recruitment
T25284 29-37 Protein denotes SerpinB2
R18119 T25284 T25293 themeOf SerpinB2,transcription
R18123 T25292 T25291 themeOf promoter,Recruitment
R18124 T25292 T25284 partOf promoter,SerpinB2

test3

Id Subject Object Predicate Lexical cue
T25318 63-76 Transcription denotes transcription
T25317 38-46 Entity denotes promoter
T25316 29-37 Protein denotes SerpinB2
T25315 0-11 Binding denotes Recruitment
T25302 29-37 Protein denotes SerpinB2
R18126 T25317 T25315 themeOf promoter,Recruitment
R18127 T25317 T25316 partOf promoter,SerpinB2