
PMC:3589482 / 3478-3679
Annnotations
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2840 | 196-199 | IN | denotes | for |
T2839 | 184-195 | JJ | denotes | responsible |
T2838 | 181-183 | VBZ | denotes | is |
T2837 | 179-180 | -RRB- | denotes | ) |
T2836 | 175-179 | CD | denotes | TLR4 |
T2835 | 174-175 | -LRB- | denotes | ( |
T2834 | 172-173 | CD | denotes | 4 |
T2833 | 163-171 | NN | denotes | receptor |
T2832 | 153-162 | JJ | denotes | toll-like |
T2831 | 149-152 | DT | denotes | The |
T2830 | 147-148 | . | denotes | . |
T2829 | 139-147 | NNS | denotes | pathways |
T2828 | 128-138 | JJ | denotes | signalling |
T2827 | 119-127 | JJ | denotes | multiple |
T2826 | 111-118 | IN | denotes | through |
T2825 | 101-110 | NNS | denotes | responses |
T2824 | 94-100 | JJ | denotes | immune |
T2823 | 84-93 | VBZ | denotes | activates |
T2822 | 80-83 | NNP | denotes | LPS |
T2821 | 78-79 | . | denotes | . |
T2820 | 77-78 | NNP | denotes | ] |
T2819 | 76-77 | CD | denotes | 9 |
T2818 | 75-76 | VBP | denotes | [ |
T2817 | 65-74 | NNS | denotes | mediators |
T2816 | 52-64 | JJ | denotes | inflammatory |
T2815 | 49-51 | IN | denotes | of |
T2814 | 43-48 | NN | denotes | range |
T2813 | 41-42 | DT | denotes | a |
T2812 | 38-40 | IN | denotes | by |
T2811 | 25-37 | JJ | denotes | up-regulated |
T2810 | 22-24 | VBZ | denotes | is |
T2809 | 18-21 | CC | denotes | and |
T2808 | 16-17 | , | denotes | , |
T2807 | 15-16 | NNP | denotes | ] |
T2806 | 13-15 | CD | denotes | 32 |
T2805 | 12-13 | NNP | denotes | [ |
T2804 | 10-11 | NNP | denotes | ] |
T2803 | 8-10 | CD | denotes | 31 |
T2802 | 7-8 | NNP | denotes | [ |
T2801 | 3-6 | NNP | denotes | LPS |
T2800 | 0-2 | IN | denotes | by |
R1882 | T2801 | T2804 | nmod | LPS,] |
R1884 | T2802 | T2804 | nmod | [,] |
R1885 | T2803 | T2804 | nummod | 31,] |
R1886 | T2804 | T2800 | pobj | ],by |
R1888 | T2805 | T2807 | nmod | [,] |
R1889 | T2806 | T2807 | nummod | 32,] |
R1890 | T2807 | T2804 | conj | ],] |
R1892 | T2808 | T2807 | punct | ",",] |
R1896 | T2811 | T2810 | acomp | up-regulated,is |
R1897 | T2812 | T2811 | prep | by,up-regulated |
R1898 | T2813 | T2814 | det | a,range |
R1900 | T2814 | T2812 | pobj | range,by |
R1901 | T2815 | T2814 | prep | of,range |
R1902 | T2816 | T2817 | amod | inflammatory,mediators |
R1904 | T2817 | T2815 | pobj | mediators,of |
R1905 | T2818 | T2820 | nmod | [,] |
R1907 | T2819 | T2820 | nummod | 9,] |
R1908 | T2820 | T2810 | npadvmod | ],is |
R1909 | T2821 | T2810 | punct | .,is |
R1910 | T2822 | T2823 | nsubj | LPS,activates |
R1911 | T2823 | T2823 | ROOT | activates,activates |
R1912 | T2824 | T2825 | amod | immune,responses |
R1913 | T2825 | T2823 | dobj | responses,activates |
R1915 | T2826 | T2823 | prep | through,activates |
R1916 | T2827 | T2829 | amod | multiple,pathways |
R1917 | T2828 | T2829 | amod | signalling,pathways |
R1919 | T2829 | T2826 | pobj | pathways,through |
R1923 | T2830 | T2823 | punct | .,activates |
R1924 | T2831 | T2838 | det | The,is |
R1925 | T2832 | T2833 | amod | toll-like,receptor |
R1927 | T2833 | T2838 | nsubj | receptor,is |
R1928 | T2834 | T2833 | nummod | 4,receptor |
R1930 | T2835 | T2833 | punct | (,receptor |
R1931 | T2836 | T2833 | appos | TLR4,receptor |
R1932 | T2837 | T2833 | punct | ),receptor |
R1934 | T2838 | T2838 | ROOT | is,is |
R1935 | T2839 | T2838 | acomp | responsible,is |
R1936 | T2840 | T2839 | prep | for,responsible |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
23472114-11001915-87899170 | 13-15 | 11001915 | denotes | 32 |
23472114-7492756-87899171 | 76-77 | 7492756 | denotes | 9 |
T53126 | 13-15 | 11001915 | denotes | 32 |
T12750 | 76-77 | 7492756 | denotes | 9 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1768 | 196-199 | IN | denotes | for |
T1767 | 184-195 | JJ | denotes | responsible |
T1766 | 181-183 | VB | denotes | is |
T1765 | 179-180 | -RRB- | denotes | ) |
T1764 | 175-179 | NN | denotes | TLR4 |
T1763 | 174-175 | -LRB- | denotes | ( |
T1762 | 172-173 | CD | denotes | 4 |
T1761 | 163-171 | NN | denotes | receptor |
T1760 | 153-162 | JJ | denotes | toll-like |
T1759 | 149-152 | DT | denotes | The |
T1758 | 139-147 | NN | denotes | pathways |
T1757 | 128-138 | NN | denotes | signalling |
T1756 | 119-127 | JJ | denotes | multiple |
T1755 | 111-118 | IN | denotes | through |
T1754 | 101-110 | NN | denotes | responses |
T1753 | 94-100 | JJ | denotes | immune |
T1752 | 84-93 | VB | denotes | activates |
T1751 | 80-83 | NN | denotes | LPS |
T1750 | 77-78 | -RRB- | denotes | ] |
T1749 | 76-77 | CD | denotes | 9 |
T1748 | 75-76 | -LRB- | denotes | [ |
T1747 | 65-74 | NN | denotes | mediators |
T1746 | 52-64 | JJ | denotes | inflammatory |
T1745 | 49-51 | IN | denotes | of |
T1744 | 43-48 | NN | denotes | range |
T1743 | 41-42 | DT | denotes | a |
T1742 | 38-40 | IN | denotes | by |
T1741 | 25-37 | VB | denotes | up-regulated |
T1740 | 22-24 | VB | denotes | is |
T1739 | 18-21 | CC | denotes | and |
T1738 | 16-17 | -COMMA- | denotes | , |
T1737 | 15-16 | -RRB- | denotes | ] |
T1736 | 13-15 | CD | denotes | 32 |
T1735 | 12-13 | -LRB- | denotes | [ |
T1734 | 11-12 | CD | denotes | – |
T1733 | 10-11 | -RRB- | denotes | ] |
T1732 | 8-10 | CD | denotes | 31 |
T1731 | 7-8 | -LRB- | denotes | [ |
T1730 | 3-6 | NN | denotes | LPS |
T1729 | 0-2 | IN | denotes | by |
R1136 | T1732 | T1731 | arg2Of | 31,[ |
R1137 | T1733 | T1731 | arg3Of | ],[ |
R1138 | T1734 | T1729 | arg2Of | –,by |
R1139 | T1734 | T1730 | arg1Of | –,LPS |
R1140 | T1734 | T1731 | arg1Of | –,[ |
R1141 | T1734 | T1735 | arg1Of | –,[ |
R1142 | T1736 | T1735 | arg2Of | 32,[ |
R1143 | T1737 | T1735 | arg3Of | ],[ |
R1145 | T1739 | T1738 | arg1Of | and,"," |
R1146 | T1741 | T1739 | arg2Of | up-regulated,and |
R1147 | T1741 | T1740 | arg2Of | up-regulated,is |
R1148 | T1744 | T1741 | arg1Of | range,up-regulated |
R1149 | T1744 | T1742 | arg2Of | range,by |
R1150 | T1744 | T1743 | arg1Of | range,a |
R1151 | T1744 | T1745 | arg1Of | range,of |
R1152 | T1747 | T1745 | arg2Of | mediators,of |
R1153 | T1747 | T1746 | arg1Of | mediators,inflammatory |
R1154 | T1747 | T1748 | arg1Of | mediators,[ |
R1155 | T1749 | T1748 | arg2Of | 9,[ |
R1156 | T1750 | T1748 | arg3Of | ],[ |
R1157 | T1751 | T1752 | arg1Of | LPS,activates |
R1158 | T1752 | T1755 | arg1Of | activates,through |
R1159 | T1754 | T1752 | arg2Of | responses,activates |
R1160 | T1754 | T1753 | arg1Of | responses,immune |
R1161 | T1758 | T1755 | arg2Of | pathways,through |
R1162 | T1758 | T1756 | arg1Of | pathways,multiple |
R1163 | T1758 | T1757 | arg1Of | pathways,signalling |
R1164 | T1761 | T1759 | arg1Of | receptor,The |
R1165 | T1761 | T1760 | arg1Of | receptor,toll-like |
R1166 | T1761 | T1762 | arg1Of | receptor,4 |
R1167 | T1761 | T1763 | arg1Of | receptor,( |
R1168 | T1761 | T1766 | arg1Of | receptor,is |
R1169 | T1761 | T1767 | arg1Of | receptor,responsible |
R1171 | T1764 | T1763 | arg2Of | TLR4,( |
R1172 | T1765 | T1763 | arg3Of | ),( |
R1174 | T1767 | T1766 | arg2Of | responsible,is |
R1175 | T1767 | T1768 | arg1Of | responsible,for |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1309 | 175-179 | Protein | denotes | TLR4 |
T1308 | 153-173 | Protein | denotes | toll-like receptor 4 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2121 | 175-179 | http://www.uniprot.org/uniprot/O00206 | denotes | TLR4 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1360 | 84-110 | http://purl.obolibrary.org/obo/GO_0002922 | denotes | activates immune responses |
T1359 | 84-110 | http://purl.obolibrary.org/obo/GO_0002253 | denotes | activates immune responses |
T1357 | 128-147 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signalling pathways |
T1354 | 128-138 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
T1342 | 94-110 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1214 | 80-148 | Sentence | denotes | LPS activates immune responses through multiple signalling pathways. |
T24 | 80-148 | Sentence | denotes | LPS activates immune responses through multiple signalling pathways. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1407 | 175-179 | Protein | denotes | TLR4 |
T1406 | 153-173 | Protein | denotes | toll-like receptor 4 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2065 | 175-179 | Protein | denotes | TLR4 |
T2064 | 153-173 | Protein | denotes | toll-like receptor 4 |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2224 | 175-179 | Protein | denotes | TLR4 |
T2223 | 153-173 | Protein | denotes | toll-like receptor 4 |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2143 | 175-179 | Protein | denotes | TLR4 |
T2142 | 153-173 | Protein | denotes | toll-like receptor 4 |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2442 | 175-179 | Protein | denotes | TLR4 |
T2427 | 3-11 | Entity | denotes | LPS [31] |
T2413 | 80-83 | Entity | denotes | LPS |
T2388 | 149-180 | Protein | denotes | The toll-like receptor 4 (TLR4) |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1122 | 25-37 | Positive_regulation | denotes | up-regulated |
T1104 | 175-179 | Protein | denotes | TLR4 |
T1103 | 153-173 | Protein | denotes | toll-like receptor 4 |
R746 | T1104 | T1103 | equivalentTo | TLR4,toll-like receptor 4 |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1172 | 175-179 | Protein | denotes | TLR4 |
T1171 | 153-173 | Protein | denotes | toll-like receptor 4 |
T1145 | 175-179 | Protein | denotes | TLR4 |
T1144 | 153-173 | Protein | denotes | toll-like receptor 4 |
R757 | T1172 | T1171 | equivalentTo | TLR4,toll-like receptor 4 |