> top > docs > PMC:3589482 > spans > 3478-3679 > annotations

PMC:3589482 / 3478-3679 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2840 196-199 IN denotes for
T2839 184-195 JJ denotes responsible
T2838 181-183 VBZ denotes is
T2837 179-180 -RRB- denotes )
T2836 175-179 CD denotes TLR4
T2835 174-175 -LRB- denotes (
T2834 172-173 CD denotes 4
T2833 163-171 NN denotes receptor
T2832 153-162 JJ denotes toll-like
T2831 149-152 DT denotes The
T2830 147-148 . denotes .
T2829 139-147 NNS denotes pathways
T2828 128-138 JJ denotes signalling
T2827 119-127 JJ denotes multiple
T2826 111-118 IN denotes through
T2825 101-110 NNS denotes responses
T2824 94-100 JJ denotes immune
T2823 84-93 VBZ denotes activates
T2822 80-83 NNP denotes LPS
T2821 78-79 . denotes .
T2820 77-78 NNP denotes ]
T2819 76-77 CD denotes 9
T2818 75-76 VBP denotes [
T2817 65-74 NNS denotes mediators
T2816 52-64 JJ denotes inflammatory
T2815 49-51 IN denotes of
T2814 43-48 NN denotes range
T2813 41-42 DT denotes a
T2812 38-40 IN denotes by
T2811 25-37 JJ denotes up-regulated
T2810 22-24 VBZ denotes is
T2809 18-21 CC denotes and
T2808 16-17 , denotes ,
T2807 15-16 NNP denotes ]
T2806 13-15 CD denotes 32
T2805 12-13 NNP denotes [
T2804 10-11 NNP denotes ]
T2803 8-10 CD denotes 31
T2802 7-8 NNP denotes [
T2801 3-6 NNP denotes LPS
T2800 0-2 IN denotes by
R1882 T2801 T2804 nmod LPS,]
R1884 T2802 T2804 nmod [,]
R1885 T2803 T2804 nummod 31,]
R1886 T2804 T2800 pobj ],by
R1888 T2805 T2807 nmod [,]
R1889 T2806 T2807 nummod 32,]
R1890 T2807 T2804 conj ],]
R1892 T2808 T2807 punct ",",]
R1896 T2811 T2810 acomp up-regulated,is
R1897 T2812 T2811 prep by,up-regulated
R1898 T2813 T2814 det a,range
R1900 T2814 T2812 pobj range,by
R1901 T2815 T2814 prep of,range
R1902 T2816 T2817 amod inflammatory,mediators
R1904 T2817 T2815 pobj mediators,of
R1905 T2818 T2820 nmod [,]
R1907 T2819 T2820 nummod 9,]
R1908 T2820 T2810 npadvmod ],is
R1909 T2821 T2810 punct .,is
R1910 T2822 T2823 nsubj LPS,activates
R1911 T2823 T2823 ROOT activates,activates
R1912 T2824 T2825 amod immune,responses
R1913 T2825 T2823 dobj responses,activates
R1915 T2826 T2823 prep through,activates
R1916 T2827 T2829 amod multiple,pathways
R1917 T2828 T2829 amod signalling,pathways
R1919 T2829 T2826 pobj pathways,through
R1923 T2830 T2823 punct .,activates
R1924 T2831 T2838 det The,is
R1925 T2832 T2833 amod toll-like,receptor
R1927 T2833 T2838 nsubj receptor,is
R1928 T2834 T2833 nummod 4,receptor
R1930 T2835 T2833 punct (,receptor
R1931 T2836 T2833 appos TLR4,receptor
R1932 T2837 T2833 punct ),receptor
R1934 T2838 T2838 ROOT is,is
R1935 T2839 T2838 acomp responsible,is
R1936 T2840 T2839 prep for,responsible

2_test

Id Subject Object Predicate Lexical cue
23472114-11001915-87899170 13-15 11001915 denotes 32
23472114-7492756-87899171 76-77 7492756 denotes 9
T53126 13-15 11001915 denotes 32
T12750 76-77 7492756 denotes 9

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1768 196-199 IN denotes for
T1767 184-195 JJ denotes responsible
T1766 181-183 VB denotes is
T1765 179-180 -RRB- denotes )
T1764 175-179 NN denotes TLR4
T1763 174-175 -LRB- denotes (
T1762 172-173 CD denotes 4
T1761 163-171 NN denotes receptor
T1760 153-162 JJ denotes toll-like
T1759 149-152 DT denotes The
T1758 139-147 NN denotes pathways
T1757 128-138 NN denotes signalling
T1756 119-127 JJ denotes multiple
T1755 111-118 IN denotes through
T1754 101-110 NN denotes responses
T1753 94-100 JJ denotes immune
T1752 84-93 VB denotes activates
T1751 80-83 NN denotes LPS
T1750 77-78 -RRB- denotes ]
T1749 76-77 CD denotes 9
T1748 75-76 -LRB- denotes [
T1747 65-74 NN denotes mediators
T1746 52-64 JJ denotes inflammatory
T1745 49-51 IN denotes of
T1744 43-48 NN denotes range
T1743 41-42 DT denotes a
T1742 38-40 IN denotes by
T1741 25-37 VB denotes up-regulated
T1740 22-24 VB denotes is
T1739 18-21 CC denotes and
T1738 16-17 -COMMA- denotes ,
T1737 15-16 -RRB- denotes ]
T1736 13-15 CD denotes 32
T1735 12-13 -LRB- denotes [
T1734 11-12 CD denotes –
T1733 10-11 -RRB- denotes ]
T1732 8-10 CD denotes 31
T1731 7-8 -LRB- denotes [
T1730 3-6 NN denotes LPS
T1729 0-2 IN denotes by
R1136 T1732 T1731 arg2Of 31,[
R1137 T1733 T1731 arg3Of ],[
R1138 T1734 T1729 arg2Of –,by
R1139 T1734 T1730 arg1Of –,LPS
R1140 T1734 T1731 arg1Of –,[
R1141 T1734 T1735 arg1Of –,[
R1142 T1736 T1735 arg2Of 32,[
R1143 T1737 T1735 arg3Of ],[
R1145 T1739 T1738 arg1Of and,","
R1146 T1741 T1739 arg2Of up-regulated,and
R1147 T1741 T1740 arg2Of up-regulated,is
R1148 T1744 T1741 arg1Of range,up-regulated
R1149 T1744 T1742 arg2Of range,by
R1150 T1744 T1743 arg1Of range,a
R1151 T1744 T1745 arg1Of range,of
R1152 T1747 T1745 arg2Of mediators,of
R1153 T1747 T1746 arg1Of mediators,inflammatory
R1154 T1747 T1748 arg1Of mediators,[
R1155 T1749 T1748 arg2Of 9,[
R1156 T1750 T1748 arg3Of ],[
R1157 T1751 T1752 arg1Of LPS,activates
R1158 T1752 T1755 arg1Of activates,through
R1159 T1754 T1752 arg2Of responses,activates
R1160 T1754 T1753 arg1Of responses,immune
R1161 T1758 T1755 arg2Of pathways,through
R1162 T1758 T1756 arg1Of pathways,multiple
R1163 T1758 T1757 arg1Of pathways,signalling
R1164 T1761 T1759 arg1Of receptor,The
R1165 T1761 T1760 arg1Of receptor,toll-like
R1166 T1761 T1762 arg1Of receptor,4
R1167 T1761 T1763 arg1Of receptor,(
R1168 T1761 T1766 arg1Of receptor,is
R1169 T1761 T1767 arg1Of receptor,responsible
R1171 T1764 T1763 arg2Of TLR4,(
R1172 T1765 T1763 arg3Of ),(
R1174 T1767 T1766 arg2Of responsible,is
R1175 T1767 T1768 arg1Of responsible,for

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1309 175-179 Protein denotes TLR4
T1308 153-173 Protein denotes toll-like receptor 4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2121 175-179 http://www.uniprot.org/uniprot/O00206 denotes TLR4

GO-BP

Id Subject Object Predicate Lexical cue
T1360 84-110 http://purl.obolibrary.org/obo/GO_0002922 denotes activates immune responses
T1359 84-110 http://purl.obolibrary.org/obo/GO_0002253 denotes activates immune responses
T1357 128-147 http://purl.obolibrary.org/obo/GO_0007165 denotes signalling pathways
T1354 128-138 http://purl.obolibrary.org/obo/GO_0023052 denotes signalling
T1342 94-110 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses

sentences

Id Subject Object Predicate Lexical cue
T1214 80-148 Sentence denotes LPS activates immune responses through multiple signalling pathways.
T24 80-148 Sentence denotes LPS activates immune responses through multiple signalling pathways.

simple1

Id Subject Object Predicate Lexical cue
T1407 175-179 Protein denotes TLR4
T1406 153-173 Protein denotes toll-like receptor 4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T2065 175-179 Protein denotes TLR4
T2064 153-173 Protein denotes toll-like receptor 4

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2224 175-179 Protein denotes TLR4
T2223 153-173 Protein denotes toll-like receptor 4

DLUT931

Id Subject Object Predicate Lexical cue
T2143 175-179 Protein denotes TLR4
T2142 153-173 Protein denotes toll-like receptor 4

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2442 175-179 Protein denotes TLR4
T2427 3-11 Entity denotes LPS [31]
T2413 80-83 Entity denotes LPS
T2388 149-180 Protein denotes The toll-like receptor 4 (TLR4)

testone

Id Subject Object Predicate Lexical cue
T1122 25-37 Positive_regulation denotes up-regulated
T1104 175-179 Protein denotes TLR4
T1103 153-173 Protein denotes toll-like receptor 4
R746 T1104 T1103 equivalentTo TLR4,toll-like receptor 4

test3

Id Subject Object Predicate Lexical cue
T1172 175-179 Protein denotes TLR4
T1171 153-173 Protein denotes toll-like receptor 4
T1145 175-179 Protein denotes TLR4
T1144 153-173 Protein denotes toll-like receptor 4
R757 T1172 T1171 equivalentTo TLR4,toll-like receptor 4