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PMC:3589482 / 33313-34879 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15631 1565-1566 . denotes .
T15630 1562-1565 NNP denotes LPS
T15629 1559-1561 TO denotes to
T15628 1550-1558 NN denotes response
T15627 1547-1549 IN denotes in
T15626 1538-1546 NN denotes promoter
T15625 1529-1537 NNP denotes SerpinB2
T15624 1525-1528 DT denotes the
T15623 1520-1524 IN denotes from
T15622 1506-1519 NN denotes transcription
T15621 1496-1505 VBN denotes increased
T15620 1492-1495 IN denotes for
T15619 1480-1491 JJ denotes responsible
T15618 1477-1479 VB denotes be
T15617 1473-1476 RB denotes not
T15616 1469-1472 MD denotes may
T15615 1467-1468 NN denotes β
T15614 1466-1467 : denotes -
T15613 1461-1466 NNP denotes C/EBP
T15612 1441-1460 JJ denotes T217-phosphorylated
T15611 1436-1440 IN denotes that
T15610 1427-1435 VBP denotes indicate
T15609 1423-1426 CC denotes and
T15608 1421-1422 , denotes ,
T15607 1410-1421 NN denotes recruitment
T15606 1404-1409 NNP denotes βT217
T15605 1403-1404 : denotes -
T15604 1396-1403 NN denotes p-C/EBP
T15603 1392-1395 CC denotes and
T15602 1390-1391 NN denotes β
T15601 1389-1390 : denotes -
T15600 1384-1389 NNP denotes C/EBP
T15599 1376-1383 IN denotes between
T15598 1363-1375 NN denotes relationship
T15597 1355-1362 JJ denotes inverse
T15596 1352-1354 DT denotes an
T15595 1347-1351 VBP denotes show
T15594 1342-1346 NNS denotes data
T15593 1336-1341 DT denotes These
T15592 1334-1335 . denotes .
T15591 1333-1334 -RRB- denotes )
T15590 1332-1333 CD denotes 7
T15589 1327-1331 NN denotes Fig.
T15588 1326-1327 -LRB- denotes (
T15587 1325-1326 -RRB- denotes )
T15586 1322-1325 NNS denotes hrs
T15585 1320-1321 CD denotes 8
T15584 1316-1319 CC denotes and
T15583 1314-1315 CD denotes 4
T15582 1313-1314 -LRB- denotes (
T15581 1302-1312 NNS denotes timepoints
T15580 1296-1301 JJ denotes later
T15579 1293-1295 IN denotes at
T15578 1281-1292 NN denotes stimulation
T15577 1277-1280 NNP denotes LPS
T15576 1272-1276 IN denotes with
T15575 1261-1271 VBN denotes diminished
T15574 1252-1260 NN denotes promoter
T15573 1243-1251 JJ denotes proximal
T15572 1234-1242 NNP denotes SerpinB2
T15571 1230-1233 DT denotes the
T15570 1226-1229 IN denotes for
T15569 1220-1225 NNP denotes βT217
T15568 1219-1220 : denotes -
T15567 1212-1219 NNP denotes p-C/EBP
T15566 1209-1211 IN denotes of
T15565 1200-1208 NN denotes affinity
T15564 1192-1199 JJ denotes binding
T15563 1188-1191 DT denotes the
T15562 1186-1187 , denotes ,
T15561 1185-1186 NN denotes β
T15560 1184-1185 : denotes -
T15559 1179-1184 NNP denotes C/EBP
T15558 1173-1178 JJ denotes total
T15557 1170-1172 TO denotes to
T15556 1161-1169 NN denotes contrast
T15555 1158-1160 IN denotes In
T15554 1156-1157 . denotes .
T15553 1155-1156 -RRB- denotes )
T15552 1154-1155 CD denotes 7
T15551 1149-1153 NN denotes Fig.
T15550 1148-1149 -LRB- denotes (
T15549 1136-1147 NN denotes stimulation
T15548 1132-1135 NNP denotes LPS
T15547 1129-1131 IN denotes of
T15546 1126-1128 NN denotes hr
T15545 1124-1125 CD denotes 1
T15544 1118-1123 IN denotes after
T15543 1110-1117 JJ denotes present
T15542 1105-1109 RB denotes also
T15541 1101-1104 CC denotes and
T15540 1092-1100 NN denotes promoter
T15539 1083-1091 JJ denotes proximal
T15538 1074-1082 NNP denotes SerpinB2
T15537 1070-1073 DT denotes the
T15536 1067-1069 TO denotes to
T15535 1061-1066 VBN denotes bound
T15534 1046-1060 RB denotes constitutively
T15533 1042-1045 VBD denotes was
T15532 1036-1041 NNP denotes βT217
T15531 1035-1036 : denotes -
T15530 1028-1035 SYM denotes p-C/EBP
T15529 1026-1027 . denotes .
T15528 1025-1026 NNP denotes ]
T15527 1023-1025 CD denotes 65
T15526 1022-1023 NNP denotes [
T15525 1013-1021 NN denotes survival
T15524 1008-1012 NN denotes cell
T15523 1003-1007 IN denotes with
T15522 992-1002 VBN denotes associated
T15521 987-991 VBN denotes been
T15520 983-986 VBZ denotes has
T15519 977-982 WDT denotes which
T15518 975-976 , denotes ,
T15517 974-975 -RRB- denotes )
T15516 969-974 NNP denotes βT217
T15515 968-969 : denotes -
T15514 961-968 SYM denotes p-C/EBP
T15513 960-961 -LRB- denotes (
T15512 952-959 NN denotes isoform
T15511 950-951 NN denotes β
T15510 949-950 : denotes -
T15509 944-949 NNP denotes C/EBP
T15508 929-943 VBD denotes phosphorylated
T15507 924-928 NNP denotes T217
T15506 920-923 DT denotes the
T15505 917-919 IN denotes of
T15504 908-916 NN denotes promoter
T15503 899-907 JJ denotes proximal
T15502 890-898 NNP denotes SerpinB2
T15501 886-889 DT denotes the
T15500 883-885 TO denotes to
T15499 871-882 NN denotes recruitment
T15498 858-870 VBD denotes investigated
T15497 855-857 PRP denotes we
T15496 853-854 , denotes ,
T15495 852-853 NNP denotes ]
T15494 850-852 CD denotes 64
T15493 849-850 NNP denotes [
T15492 847-848 : denotes ;
T15491 846-847 NNP denotes ]
T15490 844-846 CD denotes 63
T15489 843-844 NNP denotes [
T15488 841-842 : denotes ;
T15487 840-841 NNP denotes ]
T15486 838-840 CD denotes 38
T15485 837-838 NNP denotes [
T15484 831-836 NNS denotes genes
T15483 824-830 NN denotes target
T15482 810-823 VB denotes transactivate
T15481 807-809 TO denotes to
T15480 799-806 NN denotes ability
T15479 795-796 NN denotes β
T15478 794-795 : denotes -
T15398 314-322 JJ denotes enriched
T15397 310-313 DT denotes the
T15396 306-309 CC denotes and
T15395 304-305 , denotes ,
T15394 296-304 NNS denotes proteins
T15393 288-295 JJ denotes binding
T15392 284-287 NNP denotes DNA
T15391 276-283 IN denotes against
T15390 265-275 NNS denotes antibodies
T15389 260-264 IN denotes with
T15388 241-259 VBN denotes immunoprecipitated
T15387 237-240 VBD denotes was
T15386 227-236 NN denotes chromatin
T15385 219-226 JJ denotes soluble
T15384 217-218 , denotes ,
T15383 214-217 NNS denotes hrs
T15382 212-213 CD denotes 8
T15381 209-211 TO denotes to
T15380 206-208 RB denotes up
T15379 202-205 IN denotes for
T15378 198-201 NNP denotes LPS
T15377 193-197 IN denotes with
T15376 182-192 VBN denotes stimulated
T15375 177-181 VBD denotes were
T15374 171-176 NNS denotes cells
T15373 165-170 CD denotes 264.7
T15372 161-164 NNP denotes RAW
T15371 159-160 . denotes .
T15370 158-159 -RRB- denotes )
T15369 154-158 NNP denotes ChIP
T15368 153-154 -LRB- denotes (
T15367 133-152 NN denotes immunoprecipitation
T15366 123-132 NN denotes chromatin
T15365 120-122 IN denotes by
T15364 115-119 NN denotes vivo
T15363 112-114 IN denotes in
T15362 108-111 NNP denotes LPS
T15361 105-107 TO denotes to
T15360 96-104 NN denotes response
T15359 93-95 IN denotes in
T15358 84-92 NN denotes promoter
T15357 75-83 NNP denotes SerpinB2
T15356 68-74 NN denotes murine
T15355 64-67 DT denotes the
T15354 61-63 TO denotes to
T15353 49-60 NN denotes recruitment
T15352 47-48 NN denotes β
T15351 46-47 : denotes -
T15350 41-46 NNP denotes C/EBP
T15349 38-40 IN denotes of
T15348 29-37 NNS denotes dynamics
T15347 20-28 JJ denotes temporal
T15346 16-19 DT denotes the
T15345 3-15 VBD denotes investigated
T15344 0-2 PRP denotes We
T15477 789-794 NNP denotes C/EBP
T15476 782-788 VB denotes affect
T15475 778-781 MD denotes can
T15474 771-777 NNS denotes states
T15473 755-770 NN denotes phosphorylation
T15472 753-754 NN denotes β
T15471 752-753 : denotes -
T15470 747-752 NNP denotes C/EBP
T15469 744-746 IN denotes in
T15468 736-743 NNS denotes changes
T15467 730-735 IN denotes Since
T15466 728-729 . denotes .
T15465 727-728 -RRB- denotes )
T15464 726-727 CD denotes 7
T15463 721-725 NN denotes Fig.
T15462 720-721 -LRB- denotes (
T15461 716-719 NNS denotes hrs
T15460 714-715 CD denotes 8
T15459 708-713 IN denotes after
T15458 702-707 NNS denotes cells
T15457 689-701 JJ denotes unstimulated
T15456 684-688 IN denotes over
T15455 676-683 JJ denotes 10-fold
T15454 673-675 IN denotes as
T15453 668-672 RB denotes much
T15452 665-667 RB denotes as
T15451 656-664 VBG denotes reaching
T15450 652-655 NNP denotes LPS
T15449 649-651 TO denotes to
T15448 640-648 NN denotes response
T15447 637-639 IN denotes in
T15446 626-636 RB denotes temporally
T15445 616-625 VBD denotes increased
T15444 612-615 CC denotes and
T15443 600-611 NNS denotes macrophages
T15442 587-599 JJ denotes unstimulated
T15441 584-586 IN denotes in
T15440 575-583 NN denotes promoter
T15439 571-574 DT denotes the
T15438 566-570 IN denotes with
T15437 554-565 NN denotes association
T15436 550-553 PRP$ denotes its
T15435 547-549 IN denotes by
T15434 534-546 VBN denotes demonstrated
T15433 531-533 IN denotes as
T15432 522-530 NN denotes promoter
T15431 513-521 NNP denotes SerpinB2
T15430 509-512 DT denotes the
T15429 506-508 IN denotes at
T15428 498-505 JJ denotes present
T15427 483-497 RB denotes constitutively
T15426 480-482 VBZ denotes is
T15425 478-479 NN denotes β
T15424 477-478 : denotes -
T15423 472-477 NNP denotes C/EBP
T15422 467-471 IN denotes that
T15421 460-466 VBD denotes showed
T15420 452-459 NNS denotes results
T15419 448-451 DT denotes The
T15418 446-447 . denotes .
T15417 445-446 -RRB- denotes )
T15416 443-445 NN denotes 4A
T15415 438-442 JJ denotes fig.
T15414 435-437 IN denotes in
T15413 423-434 VBN denotes illustrated
T15412 422-423 -LRB- denotes (
T15411 414-421 NNS denotes primers
T15410 405-413 JJ denotes specific
T15409 396-404 NN denotes promoter
T15408 387-395 JJ denotes proximal
T15407 378-386 CD denotes SerpinB2
T15406 372-377 VBG denotes using
T15405 367-371 JJ denotes qPCR
T15404 363-366 CC denotes and
T15403 345-362 JJ denotes semi-quantitative
T15402 340-344 DT denotes both
T15401 337-339 IN denotes by
T15400 327-336 VBN denotes amplified
T15399 323-326 NN denotes DNA
R11292 T15344 T15345 nsubj We,investigated
R11294 T15346 T15348 det the,dynamics
R11295 T15347 T15348 amod temporal,dynamics
R11296 T15348 T15345 dobj dynamics,investigated
R11297 T15349 T15348 prep of,dynamics
R11298 T15350 T15353 compound C/EBP,recruitment
R11299 T15351 T15352 punct -,β
R11300 T15352 T15353 compound β,recruitment
R11301 T15353 T15349 pobj recruitment,of
R11302 T15354 T15345 prep to,investigated
R11303 T15355 T15358 det the,promoter
R11304 T15356 T15358 compound murine,promoter
R11305 T15357 T15358 compound SerpinB2,promoter
R11306 T15358 T15354 pobj promoter,to
R11307 T15359 T15345 prep in,investigated
R11308 T15360 T15359 pobj response,in
R11309 T15361 T15360 prep to,response
R11310 T15362 T15361 pobj LPS,to
R11311 T15363 T15362 prep in,LPS
R11312 T15364 T15363 pobj vivo,in
R11313 T15365 T15345 prep by,investigated
R11314 T15366 T15367 compound chromatin,immunoprecipitation
R11315 T15367 T15365 pobj immunoprecipitation,by
R11316 T15368 T15369 punct (,ChIP
R11317 T15369 T15367 appos ChIP,immunoprecipitation
R11318 T15370 T15369 punct ),ChIP
R11320 T15372 T15376 nsubjpass RAW,stimulated
R11321 T15373 T15374 nummod 264.7,cells
R11322 T15374 T15376 nsubjpass cells,stimulated
R11323 T15375 T15376 auxpass were,stimulated
R11324 T15376 T15376 ROOT stimulated,stimulated
R11325 T15377 T15376 prep with,stimulated
R11326 T15378 T15377 pobj LPS,with
R11327 T15379 T15376 prep for,stimulated
R11328 T15380 T15382 quantmod up,8
R11329 T15381 T15382 quantmod to,8
R11330 T15382 T15383 nummod 8,hrs
R11331 T15383 T15379 pobj hrs,for
R11332 T15384 T15387 punct ",",was
R11333 T15385 T15386 amod soluble,chromatin
R11334 T15386 T15387 nsubj chromatin,was
R11335 T15387 T15388 auxpass was,immunoprecipitated
R11336 T15388 T15376 conj immunoprecipitated,stimulated
R11337 T15389 T15388 prep with,immunoprecipitated
R11338 T15390 T15389 pobj antibodies,with
R11339 T15391 T15390 prep against,antibodies
R11340 T15392 T15394 amod DNA,proteins
R11341 T15393 T15394 amod binding,proteins
R11342 T15394 T15391 pobj proteins,against
R11343 T15395 T15388 punct ",",immunoprecipitated
R11344 T15396 T15388 cc and,immunoprecipitated
R11345 T15397 T15399 det the,DNA
R11346 T15398 T15399 amod enriched,DNA
R11347 T15399 T15406 nsubj DNA,using
R11348 T15400 T15399 acl amplified,DNA
R11349 T15401 T15400 agent by,amplified
R11350 T15402 T15403 preconj both,semi-quantitative
R11351 T15403 T15406 amod semi-quantitative,using
R11352 T15404 T15403 cc and,semi-quantitative
R11353 T15405 T15403 conj qPCR,semi-quantitative
R11354 T15406 T15388 conj using,immunoprecipitated
R11355 T15407 T15411 nummod SerpinB2,primers
R11356 T15408 T15409 amod proximal,promoter
R11357 T15409 T15411 nmod promoter,primers
R11358 T15410 T15411 amod specific,primers
R11359 T15411 T15406 dobj primers,using
R11360 T15412 T15411 punct (,primers
R11361 T15413 T15411 acl illustrated,primers
R11362 T15414 T15413 prep in,illustrated
R11363 T15415 T15416 amod fig.,4A
R11364 T15416 T15414 pobj 4A,in
R11365 T15417 T15411 punct ),primers
R11366 T15418 T15376 punct .,stimulated
R11367 T15419 T15420 det The,results
R11368 T15420 T15421 nsubj results,showed
R11369 T15421 T15421 ROOT showed,showed
R11370 T15422 T15426 mark that,is
R11371 T15423 T15425 compound C/EBP,β
R11372 T15424 T15425 punct -,β
R11373 T15425 T15426 nsubj β,is
R11374 T15426 T15421 ccomp is,showed
R11375 T15427 T15428 advmod constitutively,present
R11376 T15428 T15426 acomp present,is
R11377 T15429 T15428 prep at,present
R11378 T15430 T15432 det the,promoter
R11379 T15431 T15432 compound SerpinB2,promoter
R11380 T15432 T15429 pobj promoter,at
R11381 T15433 T15434 mark as,demonstrated
R11382 T15434 T15426 advcl demonstrated,is
R11383 T15435 T15434 agent by,demonstrated
R11384 T15436 T15437 poss its,association
R11385 T15437 T15435 pobj association,by
R11386 T15438 T15437 prep with,association
R11387 T15439 T15440 det the,promoter
R11388 T15440 T15438 pobj promoter,with
R11389 T15441 T15440 prep in,promoter
R11390 T15442 T15443 amod unstimulated,macrophages
R11391 T15443 T15441 pobj macrophages,in
R11392 T15444 T15434 cc and,demonstrated
R11393 T15445 T15434 conj increased,demonstrated
R11394 T15446 T15445 advmod temporally,increased
R11395 T15447 T15445 prep in,increased
R11396 T15448 T15447 pobj response,in
R11397 T15449 T15448 prep to,response
R11398 T15450 T15449 pobj LPS,to
R11399 T15451 T15445 advcl reaching,increased
R11400 T15452 T15451 prep as,reaching
R11401 T15453 T15455 amod much,10-fold
R11402 T15454 T15455 quantmod as,10-fold
R11403 T15455 T15452 pobj 10-fold,as
R11404 T15456 T15455 prep over,10-fold
R11405 T15457 T15458 amod unstimulated,cells
R11406 T15458 T15456 pobj cells,over
R11407 T15459 T15455 prep after,10-fold
R11408 T15460 T15461 nummod 8,hrs
R11409 T15461 T15459 pobj hrs,after
R11410 T15462 T15461 punct (,hrs
R11411 T15463 T15461 appos Fig.,hrs
R11412 T15464 T15463 nummod 7,Fig.
R11413 T15465 T15461 punct ),hrs
R11414 T15466 T15421 punct .,showed
R11415 T15467 T15476 mark Since,affect
R11416 T15468 T15476 nsubj changes,affect
R11417 T15469 T15468 prep in,changes
R11418 T15470 T15474 nmod C/EBP,states
R11419 T15471 T15472 punct -,β
R11420 T15472 T15474 nmod β,states
R11421 T15473 T15474 compound phosphorylation,states
R11422 T15474 T15469 pobj states,in
R11423 T15475 T15476 aux can,affect
R11424 T15476 T15498 advcl affect,investigated
R11425 T15477 T15479 compound C/EBP,β
R11426 T15478 T15479 punct -,β
R11427 T15479 T15480 poss β,ability
R11428 T15480 T15476 dobj ability,affect
R11429 T15481 T15482 aux to,transactivate
R11430 T15482 T15480 acl transactivate,ability
R11431 T15483 T15484 compound target,genes
R11432 T15484 T15482 dobj genes,transactivate
R11433 T15485 T15487 nmod [,]
R11434 T15486 T15487 nummod 38,]
R11435 T15487 T15482 dep ],transactivate
R11436 T15488 T15498 punct ;,investigated
R11437 T15489 T15498 advcl [,investigated
R11438 T15490 T15491 nummod 63,]
R11439 T15491 T15489 dobj ],[
R11440 T15492 T15491 punct ;,]
R11441 T15493 T15491 conj [,]
R11442 T15494 T15495 nummod 64,]
R11443 T15495 T15491 npadvmod ],]
R11444 T15496 T15498 punct ",",investigated
R11445 T15497 T15498 nsubj we,investigated
R11446 T15498 T15498 ROOT investigated,investigated
R11447 T15499 T15498 dobj recruitment,investigated
R11448 T15500 T15498 prep to,investigated
R11449 T15501 T15504 det the,promoter
R11450 T15502 T15504 nmod SerpinB2,promoter
R11451 T15503 T15504 amod proximal,promoter
R11452 T15504 T15500 pobj promoter,to
R11453 T15505 T15504 prep of,promoter
R11454 T15506 T15507 det the,T217
R11455 T15507 T15505 pobj T217,of
R11456 T15508 T15512 amod phosphorylated,isoform
R11457 T15509 T15512 compound C/EBP,isoform
R11458 T15510 T15511 punct -,β
R11459 T15511 T15512 compound β,isoform
R11460 T15512 T15498 dep isoform,investigated
R11461 T15513 T15516 punct (,βT217
R11462 T15514 T15516 punct p-C/EBP,βT217
R11463 T15515 T15516 punct -,βT217
R11464 T15516 T15512 appos βT217,isoform
R11465 T15517 T15516 punct ),βT217
R11466 T15518 T15512 punct ",",isoform
R11467 T15519 T15522 nsubjpass which,associated
R11468 T15520 T15522 aux has,associated
R11469 T15521 T15522 auxpass been,associated
R11470 T15522 T15512 relcl associated,isoform
R11471 T15523 T15522 prep with,associated
R11472 T15524 T15525 compound cell,survival
R11473 T15525 T15523 pobj survival,with
R11474 T15526 T15528 nmod [,]
R11475 T15527 T15528 nummod 65,]
R11476 T15528 T15525 appos ],survival
R11477 T15529 T15498 punct .,investigated
R11478 T15530 T15535 punct p-C/EBP,bound
R11479 T15531 T15532 punct -,βT217
R11480 T15532 T15535 nsubjpass βT217,bound
R11481 T15533 T15535 auxpass was,bound
R11482 T15534 T15535 advmod constitutively,bound
R11483 T15535 T15535 ROOT bound,bound
R11484 T15536 T15535 prep to,bound
R11485 T15537 T15540 det the,promoter
R11486 T15538 T15540 compound SerpinB2,promoter
R11487 T15539 T15540 compound proximal,promoter
R11488 T15540 T15536 pobj promoter,to
R11489 T15541 T15540 cc and,promoter
R11490 T15542 T15543 compound also,present
R11491 T15543 T15535 conj present,bound
R11492 T15544 T15543 prep after,present
R11493 T15545 T15546 nummod 1,hr
R11494 T15546 T15544 pobj hr,after
R11495 T15547 T15546 prep of,hr
R11496 T15548 T15549 compound LPS,stimulation
R11497 T15549 T15547 pobj stimulation,of
R11498 T15550 T15551 punct (,Fig.
R11499 T15551 T15546 appos Fig.,hr
R11500 T15552 T15551 nummod 7,Fig.
R11501 T15553 T15551 punct ),Fig.
R11502 T15554 T15498 punct .,investigated
R11503 T15555 T15555 ROOT In,In
R11504 T15556 T15555 pobj contrast,In
R11505 T15557 T15556 prep to,contrast
R11506 T15558 T15561 amod total,β
R11507 T15559 T15561 compound C/EBP,β
R11508 T15560 T15561 punct -,β
R11509 T15561 T15557 pobj β,to
R11510 T15562 T15561 punct ",",β
R11511 T15563 T15565 det the,affinity
R11512 T15564 T15565 amod binding,affinity
R11513 T15565 T15561 appos affinity,β
R11514 T15566 T15565 prep of,affinity
R11515 T15567 T15569 compound p-C/EBP,βT217
R11516 T15568 T15569 punct -,βT217
R11517 T15569 T15566 pobj βT217,of
R11518 T15570 T15565 prep for,affinity
R11519 T15571 T15574 det the,promoter
R11520 T15572 T15574 nmod SerpinB2,promoter
R11521 T15573 T15574 amod proximal,promoter
R11522 T15574 T15570 pobj promoter,for
R11523 T15575 T15574 acl diminished,promoter
R11524 T15576 T15575 prep with,diminished
R11525 T15577 T15578 compound LPS,stimulation
R11526 T15578 T15576 pobj stimulation,with
R11527 T15579 T15575 prep at,diminished
R11528 T15580 T15581 amod later,timepoints
R11529 T15581 T15579 pobj timepoints,at
R11530 T15582 T15581 punct (,timepoints
R11531 T15583 T15586 nummod 4,hrs
R11532 T15584 T15583 cc and,4
R11533 T15585 T15583 conj 8,4
R11534 T15586 T15581 appos hrs,timepoints
R11535 T15587 T15581 punct ),timepoints
R11536 T15588 T15589 punct (,Fig.
R11537 T15589 T15581 appos Fig.,timepoints
R11538 T15590 T15589 nummod 7,Fig.
R11539 T15591 T15589 punct ),Fig.
R11540 T15592 T15555 punct .,In
R11541 T15593 T15594 det These,data
R11542 T15594 T15595 nsubj data,show
R11543 T15595 T15595 ROOT show,show
R11544 T15596 T15598 det an,relationship
R11545 T15597 T15598 compound inverse,relationship
R11546 T15598 T15595 dobj relationship,show
R11547 T15599 T15598 prep between,relationship
R11548 T15600 T15599 pobj C/EBP,between
R11549 T15601 T15602 punct -,β
R11550 T15602 T15598 appos β,relationship
R11551 T15603 T15602 cc and,β
R11552 T15604 T15602 conj p-C/EBP,β
R11553 T15605 T15607 punct -,recruitment
R11554 T15606 T15607 compound βT217,recruitment
R11555 T15607 T15598 conj recruitment,relationship
R11556 T15608 T15607 punct ",",recruitment
R11557 T15609 T15607 cc and,recruitment
R11558 T15610 T15595 advcl indicate,show
R11559 T15611 T15618 mark that,be
R11560 T15612 T15615 amod T217-phosphorylated,β
R11561 T15613 T15615 compound C/EBP,β
R11562 T15614 T15615 punct -,β
R11563 T15615 T15618 nsubj β,be
R11564 T15616 T15618 aux may,be
R11565 T15617 T15618 neg not,be
R11566 T15618 T15610 ccomp be,indicate
R11567 T15619 T15618 acomp responsible,be
R11568 T15620 T15619 prep for,responsible
R11569 T15621 T15622 amod increased,transcription
R11570 T15622 T15620 pobj transcription,for
R11571 T15623 T15622 prep from,transcription
R11572 T15624 T15626 det the,promoter
R11573 T15625 T15626 compound SerpinB2,promoter
R11574 T15626 T15623 pobj promoter,from
R11575 T15627 T15618 prep in,be
R11576 T15628 T15627 pobj response,in
R11577 T15629 T15628 prep to,response
R11578 T15630 T15629 pobj LPS,to
R11579 T15631 T15595 punct .,show

2_test

Id Subject Object Predicate Lexical cue
23472114-21257317-87899182 844-846 21257317 denotes 63
23472114-17433708-87899183 850-852 17433708 denotes 64
23472114-17855774-87899184 1023-1025 17855774 denotes 65
T26631 844-846 21257317 denotes 63
T90386 850-852 17433708 denotes 64
T54308 1023-1025 17855774 denotes 65

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T15036 952-959 NN denotes isoform
T15137 1562-1565 NN denotes LPS
T15136 1559-1561 TO denotes to
T15135 1550-1558 NN denotes response
T15134 1547-1549 IN denotes in
T15133 1538-1546 NN denotes promoter
T15132 1529-1537 NN denotes SerpinB2
T15131 1525-1528 DT denotes the
T15130 1520-1524 IN denotes from
T15129 1506-1519 NN denotes transcription
T15128 1496-1505 VB denotes increased
T15127 1492-1495 IN denotes for
T15126 1480-1491 JJ denotes responsible
T15125 1477-1479 VB denotes be
T15124 1473-1476 RB denotes not
T15123 1469-1472 MD denotes may
T15122 1461-1468 NN denotes C/EBP-β
T15121 1441-1460 JJ denotes T217-phosphorylated
T15120 1436-1440 IN denotes that
T15119 1427-1435 VB denotes indicate
T15118 1423-1426 CC denotes and
T15117 1421-1422 -COMMA- denotes ,
T15116 1410-1421 NN denotes recruitment
T15115 1396-1409 NN denotes p-C/EBP-βT217
T15114 1392-1395 CC denotes and
T15113 1384-1391 NN denotes C/EBP-β
T15112 1376-1383 IN denotes between
T15111 1363-1375 NN denotes relationship
T15110 1355-1362 JJ denotes inverse
T15109 1352-1354 DT denotes an
T15108 1347-1351 VB denotes show
T15107 1342-1346 NN denotes data
T15106 1336-1341 DT denotes These
T15105 1333-1334 -RRB- denotes )
T15104 1332-1333 CD denotes 7
T15103 1327-1331 NN denotes Fig.
T15102 1326-1327 -LRB- denotes (
T15101 1325-1326 -RRB- denotes )
T15100 1322-1325 NN denotes hrs
T15099 1320-1321 CD denotes 8
T15098 1316-1319 CC denotes and
T15097 1314-1315 CD denotes 4
T15096 1313-1314 -LRB- denotes (
T15095 1302-1312 NN denotes timepoints
T15094 1296-1301 JJ denotes later
T15093 1293-1295 IN denotes at
T15092 1281-1292 NN denotes stimulation
T15091 1277-1280 NN denotes LPS
T15090 1272-1276 IN denotes with
T15089 1261-1271 VB denotes diminished
T15088 1252-1260 NN denotes promoter
T15087 1243-1251 JJ denotes proximal
T15086 1234-1242 NN denotes SerpinB2
T15085 1230-1233 DT denotes the
T15084 1226-1229 IN denotes for
T15083 1212-1225 NN denotes p-C/EBP-βT217
T15082 1209-1211 IN denotes of
T15081 1200-1208 NN denotes affinity
T15080 1192-1199 NN denotes binding
T15079 1188-1191 DT denotes the
T15078 1186-1187 -COMMA- denotes ,
T15077 1179-1186 NN denotes C/EBP-β
T15076 1173-1178 JJ denotes total
T15075 1170-1172 TO denotes to
T15074 1161-1169 NN denotes contrast
T15073 1158-1160 IN denotes In
T15072 1137-1138 -RRB- denotes t
T15071 1136-1137 CD denotes s
T15070 1132-1136 NN denotes LPS
T15069 1130-1131 -LRB- denotes f
T15068 1119-1130 NN denotes fter 1 hr o
T15067 1116-1119 NN denotes t a
T15066 1114-1116 IN denotes en
T15065 1112-1114 NN denotes es
T15064 1111-1112 CD denotes r
T15063 1106-1111 IN denotes lso p
T15062 1099-1106 JJ denotes r and a
T15061 1095-1099 RB denotes mote
T15060 1092-1095 CC denotes pro
T15059 1083-1091 NN denotes proximal
T15058 1075-1083 JJ denotes erpinB2
T15057 1067-1075 NN denotes to the S
T15056 1063-1066 DT denotes und
T15055 1061-1063 TO denotes bo
T15054 1056-1061 VB denotes vely
T15053 1042-1056 RB denotes was constituti
T15052 1039-1042 VB denotes 17
T15051 1026-1039 NN denotes . p-C/EBP-βT2
T15050 1025-1026 -RRB- denotes ]
T15049 1023-1025 CD denotes 65
T15048 1022-1023 -LRB- denotes [
T15047 1013-1021 NN denotes survival
T15046 1008-1012 NN denotes cell
T15045 1003-1007 IN denotes with
T15044 992-1002 VB denotes associated
T15043 987-991 VB denotes been
T15042 983-986 VB denotes has
T15041 977-982 WDT denotes which
T15040 975-976 -COMMA- denotes ,
T15039 974-975 -RRB- denotes )
T15038 961-974 NN denotes p-C/EBP-βT217
T15037 960-961 -LRB- denotes (
T15035 944-951 NN denotes C/EBP-β
T15034 929-943 VB denotes phosphorylated
T15033 924-928 NN denotes T217
T15032 920-923 DT denotes the
T15031 917-919 IN denotes of
T15030 908-916 NN denotes promoter
T15029 899-907 JJ denotes proximal
T15028 890-898 NN denotes SerpinB2
T15027 886-889 DT denotes the
T15026 883-885 TO denotes to
T15025 871-882 NN denotes recruitment
T15024 858-870 VB denotes investigated
T15023 855-857 PRP denotes we
T15022 853-854 -COMMA- denotes ,
T15021 852-853 -RRB- denotes ]
T15020 850-852 CD denotes 64
T15019 849-850 -LRB- denotes [
T15018 847-848 -COLON- denotes ;
T15017 846-847 -RRB- denotes ]
T15016 844-846 CD denotes 63
T15015 843-844 -LRB- denotes [
T15014 841-842 -COLON- denotes ;
T15013 840-841 -RRB- denotes ]
T15012 838-840 CD denotes 38
T15011 837-838 -LRB- denotes [
T15010 831-836 NN denotes genes
T15009 824-830 NN denotes target
T15008 810-823 VB denotes transactivate
T15007 807-809 TO denotes to
T15006 799-806 NN denotes ability
T15005 789-798 JJ denotes C/EBP-β’s
T15004 782-788 VB denotes affect
T15003 778-781 MD denotes can
T15002 771-777 NN denotes states
T15001 755-770 NN denotes phosphorylation
T15000 747-754 NN denotes C/EBP-β
T14999 744-746 IN denotes in
T14998 736-743 NN denotes changes
T14997 730-735 IN denotes Since
T14996 727-728 -RRB- denotes )
T14995 726-727 CD denotes 7
T14994 721-725 NNP denotes Fig.
T14993 720-721 -LRB- denotes (
T14992 716-719 NN denotes hrs
T14991 714-715 CD denotes 8
T14990 708-713 IN denotes after
T14989 702-707 NN denotes cells
T14988 689-701 JJ denotes unstimulated
T14987 684-688 IN denotes over
T14986 676-683 RB denotes 10-fold
T14985 673-675 IN denotes as
T14984 668-672 RB denotes much
T14983 665-667 RB denotes as
T14982 656-664 VB denotes reaching
T14981 652-655 NN denotes LPS
T14980 649-651 TO denotes to
T14979 640-648 NN denotes response
T14978 637-639 IN denotes in
T14977 626-636 RB denotes temporally
T14976 616-625 VB denotes increased
T14975 612-615 CC denotes and
T14974 600-611 NN denotes macrophages
T14973 587-599 JJ denotes unstimulated
T14972 584-586 IN denotes in
T14971 575-583 NN denotes promoter
T14970 571-574 DT denotes the
T14969 566-570 IN denotes with
T14968 554-565 NN denotes association
T14967 550-553 PRP-DOLLAR- denotes its
T14966 547-549 IN denotes by
T14965 534-546 VB denotes demonstrated
T14964 531-533 IN denotes as
T14963 522-530 NN denotes promoter
T14962 513-521 NN denotes SerpinB2
T14961 509-512 DT denotes the
T14960 506-508 IN denotes at
T14959 498-505 JJ denotes present
T14958 483-497 RB denotes constitutively
T14957 480-482 VB denotes is
T14956 472-479 NN denotes C/EBP-β
T14955 467-471 IN denotes that
T14954 460-466 VB denotes showed
T14953 452-459 NN denotes results
T14952 448-451 DT denotes The
T14951 445-446 -RRB- denotes )
T14950 443-445 NN denotes 4A
T14949 438-441 NN denotes fig
T14948 435-437 IN denotes in
T14947 423-434 VB denotes illustrated
T14946 422-423 -LRB- denotes (
T14945 414-421 NN denotes primers
T14944 405-413 JJ denotes specific
T14943 396-404 NN denotes promoter
T14942 387-395 JJ denotes proximal
T14941 378-386 NN denotes SerpinB2
T14940 372-377 VB denotes using
T14939 367-371 NN denotes qPCR
T14938 363-366 CC denotes and
T14937 345-362 JJ denotes semi-quantitative
T14936 340-344 CC denotes both
T14935 337-339 IN denotes by
T14934 327-336 VB denotes amplified
T14933 323-326 NN denotes DNA
T14932 314-322 VB denotes enriched
T14931 310-313 DT denotes the
T14930 306-309 CC denotes and
T14929 304-305 -COMMA- denotes ,
T14928 296-304 NN denotes proteins
T14927 288-295 NN denotes binding
T14926 284-287 NN denotes DNA
T14925 276-283 IN denotes against
T14924 265-275 NN denotes antibodies
T14923 260-264 IN denotes with
T14922 241-259 VB denotes immunoprecipitated
T14921 237-240 VB denotes was
T14920 227-236 NN denotes chromatin
T14919 219-226 JJ denotes soluble
T14918 217-218 -COMMA- denotes ,
T14917 214-217 NN denotes hrs
T14916 212-213 CD denotes 8
T14915 209-211 TO denotes to
T14914 206-208 RB denotes up
T14913 202-205 IN denotes for
T14912 198-201 NN denotes LPS
T14911 193-197 IN denotes with
T14910 182-192 VB denotes stimulated
T14909 177-181 VB denotes were
T14908 171-176 NN denotes cells
T14907 165-170 CD denotes 264.7
T14906 161-164 NN denotes RAW
T14905 158-159 -RRB- denotes )
T14904 154-158 NN denotes ChIP
T14903 153-154 -LRB- denotes (
T14902 133-152 NN denotes immunoprecipitation
T14901 123-132 NN denotes chromatin
T14900 120-122 IN denotes by
T14899 115-119 FW denotes vivo
T14898 112-114 FW denotes in
T14897 108-111 NN denotes LPS
T14896 105-107 TO denotes to
T14895 96-104 NN denotes response
T14894 93-95 IN denotes in
T14893 84-92 NN denotes promoter
T14892 75-83 NN denotes SerpinB2
T14891 68-74 JJ denotes murine
T14890 64-67 DT denotes the
T14889 61-63 TO denotes to
T14888 49-60 NN denotes recruitment
T14887 41-48 NN denotes C/EBP-β
T14886 38-40 IN denotes of
T14885 29-37 NN denotes dynamics
T14884 20-28 JJ denotes temporal
T14883 16-19 DT denotes the
T14882 3-15 VB denotes investigated
T14881 0-2 PRP denotes We
R10915 T14881 T14882 arg1Of We,investigated
R10916 T14882 T14889 arg1Of investigated,to
R10917 T14882 T14894 arg1Of investigated,in
R10918 T14885 T14882 arg2Of dynamics,investigated
R10919 T14885 T14883 arg1Of dynamics,the
R10920 T14885 T14884 arg1Of dynamics,temporal
R10921 T14885 T14886 arg1Of dynamics,of
R10922 T14888 T14886 arg2Of recruitment,of
R10923 T14888 T14887 arg1Of recruitment,C/EBP-β
R10924 T14893 T14889 arg2Of promoter,to
R10925 T14893 T14890 arg1Of promoter,the
R10926 T14893 T14891 arg1Of promoter,murine
R10927 T14893 T14892 arg1Of promoter,SerpinB2
R10928 T14895 T14894 arg2Of response,in
R10929 T14895 T14896 arg1Of response,to
R10930 T14897 T14896 arg2Of LPS,to
R10931 T14897 T14899 arg1Of LPS,vivo
R10932 T14897 T14900 arg1Of LPS,by
R10933 T14899 T14898 arg1Of vivo,in
R10934 T14902 T14900 arg2Of immunoprecipitation,by
R10935 T14902 T14901 arg1Of immunoprecipitation,chromatin
R10936 T14902 T14903 arg1Of immunoprecipitation,(
R10937 T14904 T14903 arg2Of ChIP,(
R10938 T14905 T14903 arg3Of ),(
R10939 T14908 T14906 arg1Of cells,RAW
R10940 T14908 T14907 arg1Of cells,264.7
R10941 T14908 T14909 arg1Of cells,were
R10942 T14908 T14910 arg2Of cells,stimulated
R10943 T14910 T14909 arg2Of stimulated,were
R10944 T14910 T14911 arg1Of stimulated,with
R10945 T14910 T14913 arg1Of stimulated,for
R10946 T14910 T14918 arg1Of stimulated,","
R10947 T14912 T14911 arg2Of LPS,with
R10948 T14916 T14914 arg1Of 8,up
R10949 T14916 T14915 arg1Of 8,to
R10950 T14917 T14913 arg2Of hrs,for
R10951 T14917 T14916 arg1Of hrs,8
R10952 T14918 T14930 arg1Of ",",and
R10953 T14920 T14919 arg1Of chromatin,soluble
R10954 T14920 T14921 arg1Of chromatin,was
R10955 T14920 T14922 arg2Of chromatin,immunoprecipitated
R10956 T14922 T14918 arg2Of immunoprecipitated,","
R10957 T14922 T14921 arg2Of immunoprecipitated,was
R10958 T14922 T14923 arg1Of immunoprecipitated,with
R10959 T14922 T14925 arg1Of immunoprecipitated,against
R10960 T14924 T14923 arg2Of antibodies,with
R10961 T14928 T14925 arg2Of proteins,against
R10962 T14928 T14926 arg1Of proteins,DNA
R10963 T14928 T14927 arg1Of proteins,binding
R10964 T14930 T14929 arg1Of and,","
R10965 T14933 T14931 arg1Of DNA,the
R10966 T14933 T14932 arg2Of DNA,enriched
R10967 T14933 T14934 arg2Of DNA,amplified
R10968 T14933 T14946 arg1Of DNA,(
R10969 T14933 T14947 arg2Of DNA,illustrated
R10970 T14939 T14934 arg1Of qPCR,amplified
R10971 T14939 T14935 arg2Of qPCR,by
R10972 T14939 T14936 arg1Of qPCR,both
R10973 T14939 T14937 arg1Of qPCR,semi-quantitative
R10974 T14939 T14938 arg1Of qPCR,and
R10975 T14939 T14940 arg1Of qPCR,using
R10976 T14945 T14940 arg2Of primers,using
R10977 T14945 T14941 arg1Of primers,SerpinB2
R10978 T14945 T14942 arg1Of primers,proximal
R10979 T14945 T14943 arg1Of primers,promoter
R10980 T14945 T14944 arg1Of primers,specific
R10981 T14947 T14930 arg2Of illustrated,and
R10982 T14947 T14948 arg1Of illustrated,in
R10983 T14949 T14948 arg2Of fig,in
R10984 T14950 T14951 arg1Of 4A,)
R10985 T14953 T14952 arg1Of results,The
R10986 T14953 T14954 arg1Of results,showed
R10987 T14956 T14957 arg1Of C/EBP-β,is
R10988 T14956 T14959 arg1Of C/EBP-β,present
R10989 T14957 T14954 arg2Of is,showed
R10990 T14957 T14955 arg1Of is,that
R10991 T14957 T14964 arg1Of is,as
R10992 T14959 T14957 arg2Of present,is
R10993 T14959 T14958 arg1Of present,constitutively
R10994 T14959 T14960 arg1Of present,at
R10995 T14963 T14960 arg2Of promoter,at
R10996 T14963 T14961 arg1Of promoter,the
R10997 T14963 T14962 arg1Of promoter,SerpinB2
R10998 T14965 T14975 arg1Of demonstrated,and
R10999 T14968 T14965 arg1Of association,demonstrated
R11000 T14968 T14966 arg2Of association,by
R11001 T14968 T14967 arg1Of association,its
R11002 T14968 T14969 arg1Of association,with
R11003 T14968 T14972 arg1Of association,in
R11004 T14971 T14969 arg2Of promoter,with
R11005 T14971 T14970 arg1Of promoter,the
R11006 T14974 T14972 arg2Of macrophages,in
R11007 T14974 T14973 arg1Of macrophages,unstimulated
R11008 T14975 T14964 arg2Of and,as
R11009 T14976 T14975 arg2Of increased,and
R11010 T14976 T14977 arg1Of increased,temporally
R11011 T14976 T14978 arg1Of increased,in
R11012 T14979 T14978 arg2Of response,in
R11013 T14979 T14980 arg1Of response,to
R11014 T14981 T14980 arg2Of LPS,to
R11015 T14981 T14982 arg1Of LPS,reaching
R11016 T14982 T14984 arg1Of reaching,much
R11017 T14982 T14987 arg1Of reaching,over
R11018 T14982 T14990 arg1Of reaching,after
R11019 T14982 T14993 arg1Of reaching,(
R11020 T14984 T14983 arg1Of much,as
R11021 T14984 T14985 arg1Of much,as
R11022 T14986 T14985 arg2Of 10-fold,as
R11023 T14989 T14987 arg2Of cells,over
R11024 T14989 T14988 arg1Of cells,unstimulated
R11025 T14992 T14990 arg2Of hrs,after
R11026 T14992 T14991 arg1Of hrs,8
R11027 T14994 T14993 arg2Of Fig.,(
R11028 T14994 T14995 arg1Of Fig.,7
R11029 T14996 T14993 arg3Of ),(
R11030 T14998 T14999 arg1Of changes,in
R11031 T14998 T15003 arg1Of changes,can
R11032 T14998 T15004 arg1Of changes,affect
R11033 T15002 T14999 arg2Of states,in
R11034 T15002 T15000 arg1Of states,C/EBP-β
R11035 T15002 T15001 arg1Of states,phosphorylation
R11036 T15004 T14997 arg2Of affect,Since
R11037 T15004 T15003 arg2Of affect,can
R11038 T15004 T15014 arg1Of affect,;
R11039 T15004 T15015 arg1Of affect,[
R11040 T15004 T15018 arg1Of affect,;
R11041 T15004 T15019 arg1Of affect,[
R11042 T15006 T15004 arg2Of ability,affect
R11043 T15006 T15005 arg1Of ability,C/EBP-β’s
R11044 T15006 T15007 modOf ability,to
R11045 T15008 T15007 arg1Of transactivate,to
R11046 T15010 T15008 arg2Of genes,transactivate
R11047 T15010 T15009 arg1Of genes,target
R11048 T15010 T15011 arg1Of genes,[
R11049 T15012 T15011 arg2Of 38,[
R11050 T15013 T15011 arg3Of ],[
R11051 T15016 T15015 arg2Of 63,[
R11052 T15017 T15015 arg3Of ],[
R11053 T15020 T15019 arg2Of 64,[
R11054 T15021 T15019 arg3Of ],[
R11055 T15023 T15024 arg1Of we,investigated
R11056 T15024 T14997 arg1Of investigated,Since
R11057 T15024 T15022 arg1Of investigated,","
R11058 T15025 T15024 arg2Of recruitment,investigated
R11059 T15025 T15026 arg1Of recruitment,to
R11060 T15025 T15040 arg1Of recruitment,","
R11061 T15025 T15041 arg1Of recruitment,which
R11062 T15025 T15042 arg1Of recruitment,has
R11063 T15025 T15043 arg1Of recruitment,been
R11064 T15025 T15044 arg2Of recruitment,associated
R11065 T15030 T15026 arg2Of promoter,to
R11066 T15030 T15027 arg1Of promoter,the
R11067 T15030 T15028 arg1Of promoter,SerpinB2
R11068 T15030 T15029 arg1Of promoter,proximal
R11069 T15030 T15031 arg1Of promoter,of
R11070 T15036 T15031 arg2Of isoform,of
R11071 T15036 T15032 arg1Of isoform,the
R11072 T15036 T15033 arg1Of isoform,T217
R11073 T15036 T15034 arg2Of isoform,phosphorylated
R11074 T15036 T15035 arg1Of isoform,C/EBP-β
R11075 T15036 T15037 arg1Of isoform,(
R11076 T15038 T15037 arg2Of p-C/EBP-βT217,(
R11077 T15039 T15037 arg3Of ),(
R11078 T15044 T15042 arg2Of associated,has
R11079 T15044 T15043 arg2Of associated,been
R11080 T15044 T15045 arg1Of associated,with
R11081 T15047 T15045 arg2Of survival,with
R11082 T15047 T15046 arg1Of survival,cell
R11083 T15047 T15052 modOf survival,17
R11084 T15049 T15048 arg2Of 65,[
R11085 T15050 T15048 arg3Of ],[
R11086 T15051 T15048 arg1Of . p-C/EBP-βT2,[
R11087 T15051 T15052 arg1Of . p-C/EBP-βT2,17
R11088 T15051 T15054 arg2Of . p-C/EBP-βT2,vely
R11089 T15054 T15052 arg2Of vely ,17
R11090 T15054 T15053 arg1Of vely ,was constituti
R11091 T15054 T15055 arg1Of vely ,bo
R11092 T15058 T15059 arg1Of erpinB2 ,proximal
R11093 T15058 T15060 arg1Of erpinB2 ,pro
R11094 T15062 T15060 arg2Of r and a,pro
R11095 T15062 T15061 arg1Of r and a,mote
R11096 T15062 T15063 arg1Of r and a,lso p
R11097 T15065 T15063 arg2Of es,lso p
R11098 T15065 T15064 arg1Of es,r
R11099 T15068 T15055 arg2Of fter 1 hr o,bo
R11100 T15068 T15056 arg1Of fter 1 hr o,und
R11101 T15068 T15057 arg1Of fter 1 hr o,to the S
R11102 T15068 T15058 arg1Of fter 1 hr o,erpinB2
R11103 T15068 T15062 arg1Of fter 1 hr o,r and a
R11104 T15068 T15066 arg1Of fter 1 hr o,en
R11105 T15068 T15067 arg1Of fter 1 hr o,t a
R11106 T15068 T15069 arg1Of fter 1 hr o,f
R11107 T15070 T15069 arg2Of LPS ,f
R11108 T15070 T15071 arg1Of LPS ,s
R11109 T15072 T15069 arg3Of t,f
R11110 T15074 T15073 arg2Of contrast,In
R11111 T15074 T15075 arg1Of contrast,to
R11112 T15077 T15075 arg2Of C/EBP-β,to
R11113 T15077 T15076 arg1Of C/EBP-β,total
R11114 T15081 T15079 arg1Of affinity,the
R11115 T15081 T15080 arg1Of affinity,binding
R11116 T15081 T15082 arg1Of affinity,of
R11117 T15081 T15089 arg1Of affinity,diminished
R11118 T15083 T15082 arg2Of p-C/EBP-βT217,of
R11119 T15083 T15084 arg1Of p-C/EBP-βT217,for
R11120 T15088 T15084 arg2Of promoter,for
R11121 T15088 T15085 arg1Of promoter,the
R11122 T15088 T15086 arg1Of promoter,SerpinB2
R11123 T15088 T15087 arg1Of promoter,proximal
R11124 T15089 T15073 arg1Of diminished,In
R11125 T15089 T15078 arg1Of diminished,","
R11126 T15089 T15090 arg1Of diminished,with
R11127 T15092 T15090 arg2Of stimulation,with
R11128 T15092 T15091 arg1Of stimulation,LPS
R11129 T15092 T15093 arg1Of stimulation,at
R11130 T15095 T15093 arg2Of timepoints,at
R11131 T15095 T15094 arg1Of timepoints,later
R11132 T15095 T15096 arg1Of timepoints,(
R11133 T15095 T15102 arg1Of timepoints,(
R11134 T15097 T15098 arg1Of 4,and
R11135 T15099 T15098 arg2Of 8,and
R11136 T15100 T15096 arg2Of hrs,(
R11137 T15100 T15097 arg1Of hrs,4
R11138 T15100 T15099 arg1Of hrs,8
R11139 T15101 T15096 arg3Of ),(
R11140 T15103 T15102 arg2Of Fig.,(
R11141 T15103 T15104 arg1Of Fig.,7
R11142 T15105 T15102 arg3Of ),(
R11143 T15107 T15106 arg1Of data,These
R11144 T15107 T15108 arg1Of data,show
R11145 T15107 T15119 arg1Of data,indicate
R11146 T15108 T15118 arg1Of show,and
R11147 T15111 T15108 arg2Of relationship,show
R11148 T15111 T15109 arg1Of relationship,an
R11149 T15111 T15110 arg1Of relationship,inverse
R11150 T15111 T15112 arg1Of relationship,between
R11151 T15113 T15114 arg1Of C/EBP-β,and
R11152 T15114 T15112 arg2Of and,between
R11153 T15116 T15114 arg2Of recruitment,and
R11154 T15116 T15115 arg1Of recruitment,p-C/EBP-βT217
R11155 T15118 T15117 arg1Of and,","
R11156 T15119 T15118 arg2Of indicate,and
R11157 T15122 T15121 arg1Of C/EBP-β,T217-phosphorylated
R11158 T15122 T15123 arg1Of C/EBP-β,may
R11159 T15122 T15125 arg1Of C/EBP-β,be
R11160 T15122 T15126 arg1Of C/EBP-β,responsible
R11161 T15125 T15119 arg2Of be,indicate
R11162 T15125 T15120 arg1Of be,that
R11163 T15125 T15123 arg2Of be,may
R11164 T15125 T15124 arg1Of be,not
R11165 T15126 T15125 arg2Of responsible,be
R11166 T15126 T15127 arg1Of responsible,for
R11167 T15129 T15127 arg2Of transcription,for
R11168 T15129 T15128 arg2Of transcription,increased
R11169 T15129 T15130 arg1Of transcription,from
R11170 T15129 T15134 arg1Of transcription,in
R11171 T15133 T15130 arg2Of promoter,from
R11172 T15133 T15131 arg1Of promoter,the
R11173 T15133 T15132 arg1Of promoter,SerpinB2
R11174 T15134 T15136 arg1Of in,to
R11175 T15135 T15134 arg2Of response,in
R11176 T15137 T15134 arg3Of LPS,in

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T14848 472-479 Antecedent denotes C/EBP-β
T14847 550-553 Anaphor denotes its
R10902 T14847 T14848 boundBy its,C/EBP-β

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15192 1529-1537 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T15191 1234-1242 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T15190 1074-1082 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T15189 890-898 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T15188 513-521 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T15187 378-386 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T15186 75-83 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T15184 1461-1468 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T15183 1384-1391 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T15182 1179-1186 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T15181 944-951 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T15180 747-754 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T15179 472-479 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T15178 41-48 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β

GO-BP

Id Subject Object Predicate Lexical cue
T14854 1506-1519 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T14853 755-770 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T14852 323-336 http://purl.obolibrary.org/obo/GO_0006277 denotes DNA amplified
T14851 1550-1565 http://purl.obolibrary.org/obo/GO_0032496 denotes response to LPS
T14850 640-655 http://purl.obolibrary.org/obo/GO_0032496 denotes response to LPS
T14849 96-111 http://purl.obolibrary.org/obo/GO_0032496 denotes response to LPS

GO-MF

Id Subject Object Predicate Lexical cue
T14859 288-304 http://purl.obolibrary.org/obo/GO_0005515 denotes binding proteins
T14858 1192-1199 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T14857 288-295 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T14856 284-295 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T14855 265-275 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies

GO-CC

Id Subject Object Predicate Lexical cue
T14867 992-1012 http://purl.obolibrary.org/obo/GO_0009986 denotes associated with cell
T14866 265-275 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T14865 265-275 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T14864 1008-1012 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T14863 702-707 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14862 171-176 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T14861 227-236 http://purl.obolibrary.org/obo/GO_0000785 denotes chromatin
T14860 123-132 http://purl.obolibrary.org/obo/GO_0000785 denotes chromatin

sentences

Id Subject Object Predicate Lexical cue
T14846 1336-1566 Sentence denotes These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS.
T14845 1158-1335 Sentence denotes In contrast to total C/EBP-β, the binding affinity of p-C/EBP-βT217 for the SerpinB2 proximal promoter diminished with LPS stimulation at later timepoints (4 and 8 hrs)(Fig. 7).
T14844 730-1157 Sentence denotes Since changes in C/EBP-β phosphorylation states can affect C/EBP-β’s ability to transactivate target genes [38]; [63]; [64], we investigated recruitment to the SerpinB2 proximal promoter of the T217 phosphorylated C/EBP-β isoform (p-C/EBP-βT217), which has been associated with cell survival [65]. p-C/EBP-βT217 was constitutively bound to the SerpinB2 proximal promoter and also present after 1 hr of LPS stimulation (Fig. 7).
T14843 448-729 Sentence denotes The results showed that C/EBP-β is constitutively present at the SerpinB2 promoter as demonstrated by its association with the promoter in unstimulated macrophages and increased temporally in response to LPS reaching as much as 10-fold over unstimulated cells after 8 hrs (Fig. 7).
T14842 443-447 Sentence denotes 4A).
T14841 161-442 Sentence denotes RAW 264.7 cells were stimulated with LPS for up to 8 hrs, soluble chromatin was immunoprecipitated with antibodies against DNA binding proteins, and the enriched DNA amplified by both semi-quantitative and qPCR using SerpinB2 proximal promoter specific primers (illustrated in fig.
T14840 0-160 Sentence denotes We investigated the temporal dynamics of C/EBP-β recruitment to the murine SerpinB2 promoter in response to LPS in vivo by chromatin immunoprecipitation (ChIP).
T206 0-160 Sentence denotes We investigated the temporal dynamics of C/EBP-β recruitment to the murine SerpinB2 promoter in response to LPS in vivo by chromatin immunoprecipitation (ChIP).
T207 161-447 Sentence denotes RAW 264.7 cells were stimulated with LPS for up to 8 hrs, soluble chromatin was immunoprecipitated with antibodies against DNA binding proteins, and the enriched DNA amplified by both semi-quantitative and qPCR using SerpinB2 proximal promoter specific primers (illustrated in fig. 4A).
T208 448-729 Sentence denotes The results showed that C/EBP-β is constitutively present at the SerpinB2 promoter as demonstrated by its association with the promoter in unstimulated macrophages and increased temporally in response to LPS reaching as much as 10-fold over unstimulated cells after 8 hrs (Fig. 7).
T209 730-1157 Sentence denotes Since changes in C/EBP-β phosphorylation states can affect C/EBP-β’s ability to transactivate target genes [38]; [63]; [64], we investigated recruitment to the SerpinB2 proximal promoter of the T217 phosphorylated C/EBP-β isoform (p-C/EBP-βT217), which has been associated with cell survival [65]. p-C/EBP-βT217 was constitutively bound to the SerpinB2 proximal promoter and also present after 1 hr of LPS stimulation (Fig. 7).
T210 1158-1335 Sentence denotes In contrast to total C/EBP-β, the binding affinity of p-C/EBP-βT217 for the SerpinB2 proximal promoter diminished with LPS stimulation at later timepoints (4 and 8 hrs)(Fig. 7).
T211 1336-1566 Sentence denotes These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS.

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T15149 789-796 Protein denotes C/EBP-β
T15148 747-754 Protein denotes C/EBP-β
T15147 961-974 Protein denotes p-C/EBP-βT217
T15146 944-951 Protein denotes C/EBP-β
T15145 890-898 Protein denotes SerpinB2
T15144 513-521 Protein denotes SerpinB2
T15143 472-479 Protein denotes C/EBP-β
T15142 378-386 Protein denotes SerpinB2
T15141 75-83 Protein denotes SerpinB2
T15140 41-48 Protein denotes C/EBP-β
T15176 1410-1421 Binding denotes recruitment
T15175 1480-1491 Regulation denotes responsible
T15174 1441-1460 Phosphorylation denotes T217-phosphorylated
T15173 1506-1519 Transcription denotes transcription
T15172 1496-1505 Positive_regulation denotes increased
T15171 1200-1208 Binding denotes affinity
T15170 1192-1199 Binding denotes binding
T15169 1261-1271 Negative_regulation denotes diminished
T15168 1061-1066 Binding denotes bound
T15167 755-770 Phosphorylation denotes phosphorylation
T15166 782-788 Regulation denotes affect
T15165 736-743 Regulation denotes changes
T15164 871-882 Binding denotes recruitment
T15163 929-943 Phosphorylation denotes phosphorylated
T15162 498-505 Gene_expression denotes present
T15161 554-565 Binding denotes association
T15160 49-60 Binding denotes recruitment
T15158 1529-1537 Protein denotes SerpinB2
T15157 1461-1468 Protein denotes C/EBP-β
T15156 1396-1409 Protein denotes p-C/EBP-βT217
T15155 1384-1391 Protein denotes C/EBP-β
T15154 1234-1242 Protein denotes SerpinB2
T15153 1212-1225 Protein denotes p-C/EBP-βT217
T15152 1179-1186 Protein denotes C/EBP-β
T15151 1074-1082 Protein denotes SerpinB2
T15150 1028-1041 Protein denotes p-C/EBP-βT217
R11179 T15140 T15160 themeOf C/EBP-β,recruitment
R11180 T15143 T15161 themeOf C/EBP-β,association
R11181 T15143 T15162 themeOf C/EBP-β,present
R11182 T15144 T15161 themeOf SerpinB2,association
R11183 T15144 T15162 themeOf SerpinB2,present
R11184 T15145 T15164 themeOf SerpinB2,recruitment
R11185 T15145 T15164 themeOf SerpinB2,recruitment
R11186 T15146 T15164 themeOf C/EBP-β,recruitment
R11187 T15146 T15163 themeOf C/EBP-β,phosphorylated
R11188 T15147 T15164 themeOf p-C/EBP-βT217,recruitment
R11189 T15147 T15163 themeOf p-C/EBP-βT217,phosphorylated
R11190 T15148 T15165 themeOf C/EBP-β,changes
R11191 T15148 T15167 themeOf C/EBP-β,phosphorylation
R11192 T15149 T15166 themeOf C/EBP-β,affect
R11193 T15150 T15168 themeOf p-C/EBP-βT217,bound
R11194 T15151 T15168 themeOf SerpinB2,bound
R11195 T15152 T15169 themeOf C/EBP-β,diminished
R11196 T15153 T15171 themeOf p-C/EBP-βT217,affinity
R11197 T15153 T15170 themeOf p-C/EBP-βT217,binding
R11198 T15154 T15171 themeOf SerpinB2,affinity
R11199 T15154 T15169 themeOf SerpinB2,diminished
R11200 T15154 T15170 themeOf SerpinB2,binding
R11201 T15155 T15176 themeOf C/EBP-β,recruitment
R11202 T15156 T15176 themeOf p-C/EBP-βT217,recruitment
R11203 T15157 T15174 themeOf C/EBP-β,T217-phosphorylated
R11204 T15157 T15175 themeOf C/EBP-β,responsible
R11205 T15158 T15172 themeOf SerpinB2,increased
R11206 T15158 T15173 themeOf SerpinB2,transcription
R11207 T15173 T15172 themeOf transcription,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T15268 1410-1421 Binding denotes recruitment
T15267 1441-1460 Phosphorylation denotes T217-phosphorylated
T15266 1480-1491 Regulation denotes responsible
T15265 1261-1271 Negative_regulation denotes diminished
T15264 1192-1199 Binding denotes binding
T15263 1061-1066 Binding denotes bound
T15262 755-770 Phosphorylation denotes phosphorylation
T15261 871-882 Binding denotes recruitment
T15260 782-788 Regulation denotes affect
T15259 929-943 Phosphorylation denotes phosphorylated
T15258 554-565 Binding denotes association
T15257 49-60 Binding denotes recruitment
T15256 29-37 Regulation denotes dynamics
T15254 1529-1537 Protein denotes SerpinB2
T15253 1461-1468 Protein denotes C/EBP-β
T15252 1396-1409 Protein denotes p-C/EBP-βT217
T15251 1384-1391 Protein denotes C/EBP-β
T15250 1234-1242 Protein denotes SerpinB2
T15249 1212-1225 Protein denotes p-C/EBP-βT217
T15248 1179-1186 Protein denotes C/EBP-β
T15247 1074-1082 Protein denotes SerpinB2
T15246 1028-1041 Protein denotes p-C/EBP-βT217
T15245 789-796 Protein denotes C/EBP-β
T15244 747-754 Protein denotes C/EBP-β
T15243 961-974 Protein denotes p-C/EBP-βT217
T15242 944-951 Protein denotes C/EBP-β
T15241 890-898 Protein denotes SerpinB2
T15240 513-521 Protein denotes SerpinB2
T15239 472-479 Protein denotes C/EBP-β
T15238 378-386 Protein denotes SerpinB2
T15237 75-83 Protein denotes SerpinB2
T15236 41-48 Protein denotes C/EBP-β
R11240 T15236 T15257 themeOf C/EBP-β,recruitment
R11241 T15239 T15258 themeOf C/EBP-β,association
R11242 T15240 T15258 themeOf SerpinB2,association
R11243 T15241 T15261 themeOf SerpinB2,recruitment
R11244 T15241 T15261 themeOf SerpinB2,recruitment
R11245 T15242 T15261 themeOf C/EBP-β,recruitment
R11246 T15242 T15259 themeOf C/EBP-β,phosphorylated
R11247 T15243 T15261 themeOf p-C/EBP-βT217,recruitment
R11248 T15244 T15262 themeOf C/EBP-β,phosphorylation
R11249 T15245 T15260 themeOf C/EBP-β,affect
R11250 T15246 T15263 themeOf p-C/EBP-βT217,bound
R11251 T15247 T15263 themeOf SerpinB2,bound
R11252 T15248 T15265 themeOf C/EBP-β,diminished
R11253 T15249 T15264 themeOf p-C/EBP-βT217,binding
R11254 T15250 T15264 themeOf SerpinB2,binding
R11255 T15251 T15268 themeOf C/EBP-β,recruitment
R11256 T15252 T15268 themeOf p-C/EBP-βT217,recruitment
R11257 T15253 T15267 themeOf C/EBP-β,T217-phosphorylated
R11258 T15253 T15266 themeOf C/EBP-β,responsible
R11259 T15257 T15256 themeOf recruitment,dynamics

DLUT931

Id Subject Object Predicate Lexical cue
T15233 1496-1505 Positive_regulation denotes increased
T15232 1480-1491 Positive_regulation denotes responsible
T15231 1506-1519 Transcription denotes transcription
T15230 1441-1460 Phosphorylation denotes T217-phosphorylated
T15229 1410-1421 Binding denotes recruitment
T15228 1261-1271 Negative_regulation denotes diminished
T15227 1192-1199 Binding denotes binding
T15226 1061-1066 Binding denotes bound
T15225 782-788 Regulation denotes affect
T15224 736-743 Regulation denotes changes
T15223 929-943 Phosphorylation denotes phosphorylated
T15222 871-882 Binding denotes recruitment
T15221 755-770 Phosphorylation denotes phosphorylation
T15220 554-565 Binding denotes association
T15219 49-60 Binding denotes recruitment
T15217 1529-1537 Protein denotes SerpinB2
T15216 1461-1468 Protein denotes C/EBP-β
T15215 1396-1409 Protein denotes p-C/EBP-βT217
T15214 1384-1391 Protein denotes C/EBP-β
T15213 1234-1242 Protein denotes SerpinB2
T15212 1212-1225 Protein denotes p-C/EBP-βT217
T15211 1179-1186 Protein denotes C/EBP-β
T15210 1074-1082 Protein denotes SerpinB2
T15209 1028-1041 Protein denotes p-C/EBP-βT217
T15208 789-796 Protein denotes C/EBP-β
T15207 747-754 Protein denotes C/EBP-β
T15206 961-974 Protein denotes p-C/EBP-βT217
T15205 944-951 Protein denotes C/EBP-β
T15204 890-898 Protein denotes SerpinB2
T15203 513-521 Protein denotes SerpinB2
T15202 472-479 Protein denotes C/EBP-β
T15201 378-386 Protein denotes SerpinB2
T15200 75-83 Protein denotes SerpinB2
T15199 41-48 Protein denotes C/EBP-β
R11212 T15199 T15219 themeOf C/EBP-β,recruitment
R11213 T15200 T15219 themeOf SerpinB2,recruitment
R11214 T15202 T15220 themeOf C/EBP-β,association
R11215 T15203 T15220 themeOf SerpinB2,association
R11216 T15204 T15222 themeOf SerpinB2,recruitment
R11217 T15204 T15222 themeOf SerpinB2,recruitment
R11218 T15205 T15222 themeOf C/EBP-β,recruitment
R11219 T15205 T15223 themeOf C/EBP-β,phosphorylated
R11220 T15206 T15222 themeOf p-C/EBP-βT217,recruitment
R11221 T15206 T15223 themeOf p-C/EBP-βT217,phosphorylated
R11222 T15207 T15221 themeOf C/EBP-β,phosphorylation
R11223 T15208 T15225 themeOf C/EBP-β,affect
R11224 T15209 T15226 themeOf p-C/EBP-βT217,bound
R11225 T15210 T15226 themeOf SerpinB2,bound
R11226 T15211 T15228 themeOf C/EBP-β,diminished
R11227 T15212 T15227 themeOf p-C/EBP-βT217,binding
R11228 T15213 T15227 themeOf SerpinB2,binding
R11229 T15214 T15229 themeOf C/EBP-β,recruitment
R11230 T15215 T15229 themeOf p-C/EBP-βT217,recruitment
R11231 T15216 T15230 themeOf C/EBP-β,T217-phosphorylated
R11232 T15216 T15232 causeOf C/EBP-β,responsible
R11233 T15217 T15231 themeOf SerpinB2,transcription
R11234 T15221 T15224 themeOf phosphorylation,changes
R11235 T15224 T15225 causeOf changes,affect
R11236 T15227 T15228 themeOf binding,diminished
R11237 T15231 T15232 themeOf transcription,responsible
R11238 T15231 T15233 themeOf transcription,increased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15328 1441-1468 Phosphorylation denotes T217-phosphorylated C/EBP-β
T15327 38-60 Binding denotes of C/EBP-β recruitment
T15325 1028-1100 Binding denotes p-C/EBP-βT217 was constitutively bound to the SerpinB2 proximal promoter
T15324 1188-1251 Binding denotes the binding affinity of p-C/EBP-βT217 for the SerpinB2 proximal
T15323 1188-1251 Binding denotes the binding affinity of p-C/EBP-βT217 for the SerpinB2 proximal
T15322 1396-1421 Binding denotes p-C/EBP-βT217 recruitment
T15321 747-770 Phosphorylation denotes C/EBP-β phosphorylation
T15320 810-841 Positive_regulation denotes transactivate target genes [38]
T15319 566-583 Entity denotes with the promoter
T15318 472-479 Protein denotes C/EBP-β
T15317 513-521 Protein denotes SerpinB2
T15316 890-898 Protein denotes SerpinB2
T15315 1441-1460 Entity denotes T217-phosphorylated
T15314 1320-1325 Protein denotes 8 hrs
T15313 1226-1251 Protein denotes for the SerpinB2 proximal
T15312 123-132 Entity denotes chromatin
T15311 75-83 Protein denotes SerpinB2
T15310 509-530 Entity denotes the SerpinB2 promoter
T15309 944-951 Protein denotes C/EBP-β
T15308 1384-1391 Protein denotes C/EBP-β
T15307 1074-1082 Protein denotes SerpinB2
T15306 1277-1280 Entity denotes LPS
T15305 64-92 Entity denotes the murine SerpinB2 promoter
T15303 1209-1225 Protein denotes of p-C/EBP-βT217
T15302 886-975 Entity denotes the SerpinB2 proximal promoter of the T217 phosphorylated C/EBP-β isoform (p-C/EBP-βT217)
T15301 1067-1100 Entity denotes to the SerpinB2 proximal promoter
T15300 920-975 Entity denotes the T217 phosphorylated C/EBP-β isoform (p-C/EBP-βT217)
T15299 824-841 Protein denotes target genes [38]
T15298 747-754 Protein denotes C/EBP-β
T15297 1529-1537 Protein denotes SerpinB2
T15296 1149-1152 Protein denotes Fig
T15295 219-236 Entity denotes soluble chromatin
T15293 1525-1546 Entity denotes the SerpinB2 promoter
T15292 714-719 Protein denotes 8 hrs
T15291 1252-1326 Entity denotes promoter diminished with LPS stimulation at later timepoints (4 and 8 hrs)
T15290 1003-1026 Entity denotes with cell survival [65]
T15289 260-275 Entity denotes with antibodies
T15288 961-974 Protein denotes p-C/EBP-βT217
T15287 1179-1187 Protein denotes C/EBP-β,
T15286 387-413 Entity denotes proximal promoter specific
T15285 1327-1330 Protein denotes Fig
T15284 1132-1135 Entity denotes LPS
T15282 198-201 Entity denotes LPS
T15281 310-326 Entity denotes the enriched DNA
T15280 652-655 Entity denotes LPS
T15279 721-724 Protein denotes Fig
T15278 600-611 Entity denotes macrophages
T15277 1396-1409 Protein denotes p-C/EBP-βT217
T15276 1028-1041 Protein denotes p-C/EBP-βT217
T15275 108-159 Entity denotes LPS in vivo by chromatin immunoprecipitation (ChIP)
T15274 378-386 Protein denotes SerpinB2
T15273 206-217 Protein denotes up to 8 hrs
T15272 367-371 Protein denotes qPCR
T15271 1441-1468 Protein denotes T217-phosphorylated C/EBP-β
T15270 41-48 Protein denotes C/EBP-β
T15269 284-305 Protein denotes DNA binding proteins,
R11260 T15270 T15327 themeOf C/EBP-β,of C/EBP-β recruitment
R11261 T15271 T15328 themeOf T217-phosphorylated C/EBP-β,T217-phosphorylated C/EBP-β
R11262 T15276 T15325 themeOf p-C/EBP-βT217,p-C/EBP-βT217 was constitutively bound to the SerpinB2 proximal promoter
R11263 T15277 T15322 themeOf p-C/EBP-βT217,p-C/EBP-βT217 recruitment
R11265 T15293 T15297 partOf the SerpinB2 promoter,SerpinB2
R11266 T15298 T15321 themeOf C/EBP-β,C/EBP-β phosphorylation
R11267 T15299 T15320 themeOf target genes [38],transactivate target genes [38]
R11268 T15301 T15307 partOf to the SerpinB2 proximal promoter,SerpinB2
R11269 T15301 T15325 themeOf to the SerpinB2 proximal promoter,p-C/EBP-βT217 was constitutively bound to the SerpinB2 proximal promoter
R11270 T15302 T15316 partOf the SerpinB2 proximal promoter of the T217 phosphorylated C/EBP-β isoform (p-C/EBP-βT217),SerpinB2
R11271 T15303 T15323 themeOf of p-C/EBP-βT217,the binding affinity of p-C/EBP-βT217 for the SerpinB2 proximal
R11272 T15305 T15311 partOf the murine SerpinB2 promoter,SerpinB2
R11273 T15310 T15317 partOf the SerpinB2 promoter,SerpinB2
R11274 T15313 T15323 themeOf for the SerpinB2 proximal,the binding affinity of p-C/EBP-βT217 for the SerpinB2 proximal
R11275 T15315 T15271 partOf T217-phosphorylated,T217-phosphorylated C/EBP-β
R11276 T15315 T15328 siteOf T217-phosphorylated,T217-phosphorylated C/EBP-β

testone

Id Subject Object Predicate Lexical cue
T14821 1506-1519 Transcription denotes transcription
T14820 1496-1505 Positive_regulation denotes increased
T14819 1446-1460 Phosphorylation denotes phosphorylated
T14818 1410-1421 Binding denotes recruitment
T14817 1252-1260 Entity denotes promoter
T14816 1192-1199 Binding denotes binding
T14815 1092-1100 Entity denotes promoter
T14814 1083-1091 Entity denotes proximal
T14813 1074-1082 Entity denotes SerpinB2
T14812 1061-1066 Binding denotes bound
T14811 929-943 Phosphorylation denotes phosphorylated
T14810 908-916 Entity denotes promoter
T14809 899-907 Entity denotes proximal
T14808 890-898 Entity denotes SerpinB2
T14807 871-882 Binding denotes recruitment
T14806 755-770 Phosphorylation denotes phosphorylation
T14805 736-743 Regulation denotes changes
T14804 640-651 Positive_regulation denotes response to
T14803 554-565 Binding denotes association
T14802 84-92 Entity denotes promoter
T14801 49-60 Binding denotes recruitment
R10892 T14806 T14805 themeOf phosphorylation,changes
R10893 T14810 T14807 themeOf promoter,recruitment
R10894 T14815 T14812 themeOf promoter,bound
R10895 T14817 T14816 themeOf promoter,binding
R10896 T14821 T14820 themeOf transcription,increased

test3

Id Subject Object Predicate Lexical cue
T14838 1506-1519 Transcription denotes transcription
T14837 1496-1505 Positive_regulation denotes increased
T14836 1480-1491 Positive_regulation denotes responsible
T14835 1446-1460 Phosphorylation denotes phosphorylated
T14834 1410-1421 Binding denotes recruitment
T14833 1192-1199 Binding denotes binding
T14832 1061-1066 Binding denotes bound
T14831 929-943 Phosphorylation denotes phosphorylated
T14830 908-916 Entity denotes promoter
T14829 871-882 Binding denotes recruitment
T14828 782-788 Regulation denotes affect
T14827 755-770 Phosphorylation denotes phosphorylation
T14826 736-743 Regulation denotes changes
T14825 554-565 Binding denotes association
T14824 522-530 Entity denotes promoter
T14823 49-60 Binding denotes recruitment
R10897 T14827 T14826 themeOf phosphorylation,changes
R10898 T14827 T14828 causeOf phosphorylation,affect
R10899 T14830 T14829 themeOf promoter,recruitment
R10900 T14837 T14836 themeOf increased,responsible
R10901 T14838 T14837 themeOf transcription,increased