PMC:3589482 / 3267-3392
Annnotations
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2780","span":{"begin":124,"end":125},"obj":"."},{"id":"T2779","span":{"begin":123,"end":124},"obj":"NNP"},{"id":"T2778","span":{"begin":121,"end":123},"obj":"CD"},{"id":"T2777","span":{"begin":120,"end":121},"obj":"NNP"},{"id":"T2776","span":{"begin":118,"end":119},"obj":":"},{"id":"T2775","span":{"begin":117,"end":118},"obj":"NNP"},{"id":"T2774","span":{"begin":115,"end":117},"obj":"CD"},{"id":"T2773","span":{"begin":114,"end":115},"obj":"NNP"},{"id":"T2772","span":{"begin":104,"end":113},"obj":"NNS"},{"id":"T2771","span":{"begin":100,"end":103},"obj":"CC"},{"id":"T2770","span":{"begin":90,"end":99},"obj":"NNS"},{"id":"T2769","span":{"begin":87,"end":89},"obj":"IN"},{"id":"T2768","span":{"begin":82,"end":86},"obj":"DT"},{"id":"T2767","span":{"begin":79,"end":81},"obj":"TO"},{"id":"T2766","span":{"begin":69,"end":78},"obj":"JJ"},{"id":"T2765","span":{"begin":62,"end":68},"obj":"NN"},{"id":"T2764","span":{"begin":53,"end":61},"obj":"JJ"},{"id":"T2763","span":{"begin":48,"end":52},"obj":"NN"},{"id":"T2762","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T2761","span":{"begin":41,"end":42},"obj":"DT"},{"id":"T2760","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T2759","span":{"begin":28,"end":37},"obj":"VBN"},{"id":"T2758","span":{"begin":21,"end":27},"obj":"RB"},{"id":"T2757","span":{"begin":18,"end":20},"obj":"VBZ"},{"id":"T2756","span":{"begin":13,"end":17},"obj":"NN"},{"id":"T2755","span":{"begin":4,"end":12},"obj":"NNP"},{"id":"T2754","span":{"begin":0,"end":3},"obj":"DT"}],"relations":[{"id":"R1818","pred":"det","subj":"T2754","obj":"T2756"},{"id":"R1819","pred":"compound","subj":"T2755","obj":"T2756"},{"id":"R1821","pred":"nsubjpass","subj":"T2756","obj":"T2759"},{"id":"R1822","pred":"auxpass","subj":"T2757","obj":"T2759"},{"id":"R1823","pred":"advmod","subj":"T2758","obj":"T2759"},{"id":"R1825","pred":"ROOT","subj":"T2759","obj":"T2759"},{"id":"R1826","pred":"prep","subj":"T2760","obj":"T2759"},{"id":"R1827","pred":"det","subj":"T2761","obj":"T2765"},{"id":"R1829","pred":"compound","subj":"T2762","obj":"T2763"},{"id":"R1830","pred":"nmod","subj":"T2763","obj":"T2765"},{"id":"R1831","pred":"amod","subj":"T2764","obj":"T2765"},{"id":"R1833","pred":"pobj","subj":"T2765","obj":"T2760"},{"id":"R1834","pred":"amod","subj":"T2766","obj":"T2765"},{"id":"R1836","pred":"prep","subj":"T2767","obj":"T2766"},{"id":"R1837","pred":"pobj","subj":"T2768","obj":"T2767"},{"id":"R1838","pred":"prep","subj":"T2769","obj":"T2768"},{"id":"R1840","pred":"pobj","subj":"T2770","obj":"T2769"},{"id":"R1841","pred":"cc","subj":"T2771","obj":"T2770"},{"id":"R1842","pred":"conj","subj":"T2772","obj":"T2770"},{"id":"R1843","pred":"nmod","subj":"T2773","obj":"T2775"},{"id":"R1845","pred":"nummod","subj":"T2774","obj":"T2775"},{"id":"R1846","pred":"appos","subj":"T2775","obj":"T2768"},{"id":"R1848","pred":"punct","subj":"T2776","obj":"T2775"},{"id":"R1849","pred":"nmod","subj":"T2777","obj":"T2779"},{"id":"R1850","pred":"nummod","subj":"T2778","obj":"T2779"},{"id":"R1851","pred":"appos","subj":"T2779","obj":"T2775"},{"id":"R1853","pred":"punct","subj":"T2780","obj":"T2759"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
2_test
{"project":"2_test","denotations":[{"id":"23472114-8916932-87899169","span":{"begin":121,"end":123},"obj":"8916932"},{"id":"T82770","span":{"begin":121,"end":123},"obj":"8916932"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T1687","span":{"begin":18,"end":20},"obj":"VB"},{"id":"T1686","span":{"begin":13,"end":17},"obj":"NN"},{"id":"T1685","span":{"begin":4,"end":12},"obj":"NN"},{"id":"T1684","span":{"begin":0,"end":3},"obj":"DT"},{"id":"T1709","span":{"begin":123,"end":124},"obj":"-RRB-"},{"id":"T1708","span":{"begin":121,"end":123},"obj":"CD"},{"id":"T1707","span":{"begin":120,"end":121},"obj":"-LRB-"},{"id":"T1706","span":{"begin":118,"end":119},"obj":"-COLON-"},{"id":"T1705","span":{"begin":117,"end":118},"obj":"-RRB-"},{"id":"T1704","span":{"begin":115,"end":117},"obj":"CD"},{"id":"T1703","span":{"begin":114,"end":115},"obj":"-LRB-"},{"id":"T1702","span":{"begin":104,"end":113},"obj":"NN"},{"id":"T1701","span":{"begin":100,"end":103},"obj":"CC"},{"id":"T1700","span":{"begin":90,"end":99},"obj":"NN"},{"id":"T1699","span":{"begin":87,"end":89},"obj":"IN"},{"id":"T1698","span":{"begin":82,"end":86},"obj":"DT"},{"id":"T1697","span":{"begin":79,"end":81},"obj":"TO"},{"id":"T1696","span":{"begin":69,"end":78},"obj":"JJ"},{"id":"T1695","span":{"begin":62,"end":68},"obj":"NN"},{"id":"T1694","span":{"begin":53,"end":61},"obj":"JJ"},{"id":"T1693","span":{"begin":48,"end":52},"obj":"NN"},{"id":"T1692","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T1691","span":{"begin":41,"end":42},"obj":"DT"},{"id":"T1690","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T1689","span":{"begin":28,"end":37},"obj":"VB"},{"id":"T1688","span":{"begin":21,"end":27},"obj":"RB"}],"relations":[{"id":"R1086","pred":"arg1Of","subj":"T1686","obj":"T1684"},{"id":"R1087","pred":"arg1Of","subj":"T1686","obj":"T1685"},{"id":"R1088","pred":"arg1Of","subj":"T1686","obj":"T1687"},{"id":"R1089","pred":"arg2Of","subj":"T1686","obj":"T1689"},{"id":"R1090","pred":"arg2Of","subj":"T1689","obj":"T1687"},{"id":"R1091","pred":"arg1Of","subj":"T1689","obj":"T1688"},{"id":"R1092","pred":"arg1Of","subj":"T1689","obj":"T1690"},{"id":"R1093","pred":"arg1Of","subj":"T1689","obj":"T1706"},{"id":"R1094","pred":"arg1Of","subj":"T1689","obj":"T1707"},{"id":"R1095","pred":"arg2Of","subj":"T1695","obj":"T1690"},{"id":"R1096","pred":"arg1Of","subj":"T1695","obj":"T1691"},{"id":"R1097","pred":"arg1Of","subj":"T1695","obj":"T1692"},{"id":"R1098","pred":"arg1Of","subj":"T1695","obj":"T1693"},{"id":"R1099","pred":"arg1Of","subj":"T1695","obj":"T1694"},{"id":"R1100","pred":"arg1Of","subj":"T1695","obj":"T1696"},{"id":"R1101","pred":"arg1Of","subj":"T1696","obj":"T1697"},{"id":"R1102","pred":"arg2Of","subj":"T1698","obj":"T1697"},{"id":"R1103","pred":"arg1Of","subj":"T1698","obj":"T1699"},{"id":"R1104","pred":"arg1Of","subj":"T1700","obj":"T1701"},{"id":"R1105","pred":"arg2Of","subj":"T1701","obj":"T1699"},{"id":"R1106","pred":"arg1Of","subj":"T1701","obj":"T1703"},{"id":"R1107","pred":"arg2Of","subj":"T1702","obj":"T1701"},{"id":"R1108","pred":"arg2Of","subj":"T1704","obj":"T1703"},{"id":"R1109","pred":"arg3Of","subj":"T1705","obj":"T1703"},{"id":"R1110","pred":"arg2Of","subj":"T1708","obj":"T1707"},{"id":"R1111","pred":"arg3Of","subj":"T1709","obj":"T1707"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
bionlp-st-ge-2016-coref
{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T1290","span":{"begin":4,"end":12},"obj":"Antecedent"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T1307","span":{"begin":4,"end":12},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T2110","span":{"begin":4,"end":12},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T1391","span":{"begin":43,"end":47},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
sentences
{"project":"sentences","denotations":[{"id":"T1212","span":{"begin":0,"end":125},"obj":"Sentence"},{"id":"T22","span":{"begin":0,"end":125},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
simple1
{"project":"simple1","denotations":[{"id":"T1405","span":{"begin":4,"end":12},"obj":"Protein"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T2063","span":{"begin":4,"end":12},"obj":"Protein"},{"id":"T2085","span":{"begin":28,"end":37},"obj":"Regulation"}],"relations":[{"id":"R1453","pred":"themeOf","subj":"T2063","obj":"T2085"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T2222","span":{"begin":4,"end":12},"obj":"Protein"},{"id":"T2244","span":{"begin":28,"end":37},"obj":"Regulation"}],"relations":[{"id":"R1513","pred":"themeOf","subj":"T2222","obj":"T2244"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T2164","span":{"begin":28,"end":37},"obj":"Regulation"},{"id":"T2141","span":{"begin":4,"end":12},"obj":"Protein"}],"relations":[{"id":"R1481","pred":"themeOf","subj":"T2141","obj":"T2164"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T2467","span":{"begin":0,"end":118},"obj":"Regulation"},{"id":"T2440","span":{"begin":0,"end":17},"obj":"Protein"},{"id":"T2421","span":{"begin":4,"end":12},"obj":"Protein"},{"id":"T2420","span":{"begin":90,"end":99},"obj":"Protein"},{"id":"T2411","span":{"begin":43,"end":61},"obj":"Entity"},{"id":"T2378","span":{"begin":104,"end":113},"obj":"Protein"}],"relations":[{"id":"R1637","pred":"themeOf","subj":"T2440","obj":"T2467"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T2277","span":{"begin":4,"end":17},"obj":"Protein"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
testone
{"project":"testone","denotations":[{"id":"T1102","span":{"begin":4,"end":12},"obj":"Protein"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}
test3
{"project":"test3","denotations":[{"id":"T1169","span":{"begin":4,"end":12},"obj":"Protein"},{"id":"T1143","span":{"begin":4,"end":12},"obj":"Protein"}],"text":"The SerpinB2 gene is highly regulated in a cell type specific manner analogous to that of cytokines and oncogenes [29]; [30]."}