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PMC:3589482 / 32055-32134 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T25049 78-79 . denotes .
T25048 68-78 NN denotes expression
T25047 63-67 NNP denotes mRNA
T25046 54-62 NNP denotes SerpinB2
T25045 42-53 JJ denotes LPS-induced
T25044 38-41 CC denotes and
T25043 25-37 JJ denotes constitutive
T25042 21-24 IN denotes for
T25041 11-20 JJ denotes essential
T25040 8-10 VBZ denotes is
T25039 6-7 NN denotes β
T25038 5-6 : denotes -
T25037 0-5 SYM denotes C/EBP
R17904 T25037 T25040 dep C/EBP,is
R17905 T25038 T25040 punct -,is
R17906 T25039 T25040 nsubj β,is
R17907 T25040 T25040 ROOT is,is
R17908 T25041 T25040 acomp essential,is
R17909 T25042 T25041 prep for,essential
R17910 T25043 T25048 amod constitutive,expression
R17911 T25044 T25043 cc and,constitutive
R17912 T25045 T25043 conj LPS-induced,constitutive
R17913 T25046 T25047 compound SerpinB2,mRNA
R17914 T25047 T25048 compound mRNA,expression
R17915 T25048 T25042 pobj expression,for
R17916 T25049 T25040 punct .,is

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T24639 68-78 NN denotes expression
T24638 63-67 NN denotes mRNA
T24637 54-62 NN denotes SerpinB2
T24636 42-53 JJ denotes LPS-induced
T24635 38-41 CC denotes and
T24634 25-37 JJ denotes constitutive
T24633 21-24 IN denotes for
T24632 11-20 JJ denotes essential
T24631 8-10 VB denotes is
T24630 0-7 NN denotes C/EBP-β
R17623 T24630 T24631 arg1Of C/EBP-β,is
R17624 T24630 T24632 arg1Of C/EBP-β,essential
R17625 T24632 T24631 arg2Of essential,is
R17626 T24632 T24633 arg1Of essential,for
R17627 T24634 T24635 arg1Of constitutive,and
R17628 T24636 T24635 arg2Of LPS-induced,and
R17629 T24639 T24633 arg2Of expression,for
R17630 T24639 T24634 arg1Of expression,constitutive
R17631 T24639 T24636 arg1Of expression,LPS-induced
R17632 T24639 T24637 arg1Of expression,SerpinB2
R17633 T24639 T24638 arg1Of expression,mRNA

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T24605 54-62 Protein denotes SerpinB2
T24604 0-7 Protein denotes C/EBP-β

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T24853 0-7 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T24861 54-62 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

sentences

Id Subject Object Predicate Lexical cue
T24569 0-79 Sentence denotes C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression.

simple1

Id Subject Object Predicate Lexical cue
T24618 54-62 Protein denotes SerpinB2
T24617 0-7 Protein denotes C/EBP-β

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T24843 11-20 Positive_regulation denotes essential
T24842 42-53 Positive_regulation denotes LPS-induced
T24841 68-78 Transcription denotes expression
T24829 54-62 Protein denotes SerpinB2
T24828 0-7 Protein denotes C/EBP-β
R17808 T24828 T24843 causeOf C/EBP-β,essential
R17809 T24829 T24842 themeOf SerpinB2,LPS-induced
R17810 T24829 T24841 themeOf SerpinB2,expression
R17821 T24841 T24843 themeOf expression,essential
R17822 T24841 T24842 themeOf expression,LPS-induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T24922 68-78 Transcription denotes expression
T24910 54-62 Protein denotes SerpinB2
T24909 0-7 Protein denotes C/EBP-β
T24924 42-53 Positive_regulation denotes LPS-induced
T24923 11-20 Positive_regulation denotes essential
R17844 T24910 T24922 themeOf SerpinB2,expression
R17857 T24922 T24923 themeOf expression,essential
R17858 T24922 T24924 themeOf expression,LPS-induced
R17843 T24909 T24923 causeOf C/EBP-β,essential

DLUT931

Id Subject Object Predicate Lexical cue
T24899 42-53 Positive_regulation denotes LPS-induced
T24898 11-20 Positive_regulation denotes essential
T24897 68-78 Transcription denotes expression
T24885 54-62 Protein denotes SerpinB2
T24884 0-7 Protein denotes C/EBP-β
R17831 T24885 T24897 themeOf SerpinB2,expression
R17839 T24897 T24898 themeOf expression,essential
R17830 T24884 T24898 causeOf C/EBP-β,essential
R17840 T24897 T24899 themeOf expression,LPS-induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T25032 21-78 Gene_expression denotes for constitutive and LPS-induced SerpinB2 mRNA expression
T25028 0-7 Protein denotes C/EBP-β
T25021 54-67 Protein denotes SerpinB2 mRNA
T25020 54-62 Protein denotes SerpinB2
T25018 42-53 Entity denotes LPS-induced
R17902 T25021 T25032 themeOf SerpinB2 mRNA,for constitutive and LPS-induced SerpinB2 mRNA expression

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T24937 11-20 Positive_regulation denotes essential
T24936 68-78 Gene_expression denotes expression
T24935 54-67 Protein denotes SerpinB2 mRNA
T24934 0-7 Protein denotes C/EBP-β
R17862 T24934 T24937 causeOf C/EBP-β,essential
R17863 T24935 T24936 themeOf SerpinB2 mRNA,expression
R17864 T24936 T24937 themeOf expression,essential

testone

Id Subject Object Predicate Lexical cue
T24530 63-78 Transcription denotes mRNA expression
T24529 46-53 Positive_regulation denotes induced
T24528 11-20 Positive_regulation denotes essential
T24516 54-62 Protein denotes SerpinB2
T24515 0-7 Protein denotes C/EBP-β
R17591 T24515 T24528 causeOf C/EBP-β,essential
R17592 T24516 T24530 themeOf SerpinB2,mRNA expression
R17596 T24529 T24528 themeOf induced,essential
R17597 T24530 T24529 themeOf mRNA expression,induced

test3

Id Subject Object Predicate Lexical cue
T24551 63-78 Transcription denotes mRNA expression
T24550 54-62 Protein denotes SerpinB2
T24549 46-53 Positive_regulation denotes induced
T24548 0-7 Protein denotes C/EBP-β
T24536 54-62 Protein denotes SerpinB2
T24535 0-7 Protein denotes C/EBP-β
R17598 T24548 T24549 causeOf C/EBP-β,induced
R17599 T24550 T24551 themeOf SerpinB2,mRNA expression
R17600 T24551 T24549 themeOf mRNA expression,induced