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PMC:3589482 / 31316-31373 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14652 53-57 NNS denotes MEFs
T14651 43-52 JJ denotes wild-type
T14650 40-42 IN denotes in
T14649 29-39 NN denotes expression
T14648 24-28 NNP denotes mRNA
T14647 15-23 NNP denotes SerpinB2
T14646 12-14 IN denotes in
T14645 3-11 NN denotes increase
T14644 0-2 DT denotes an
R10776 T14644 T14645 det an,increase
R10778 T14646 T14645 prep in,increase
R10779 T14647 T14648 compound SerpinB2,mRNA
R10780 T14648 T14649 compound mRNA,expression
R10781 T14649 T14646 pobj expression,in
R10782 T14650 T14649 prep in,expression
R10783 T14651 T14652 amod wild-type,MEFs
R10784 T14652 T14650 pobj MEFs,in

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14138 53-57 NN denotes MEFs
T14137 43-52 JJ denotes wild-type
T14136 40-42 IN denotes in
T14135 29-39 NN denotes expression
T14134 24-28 NN denotes mRNA
T14133 15-23 NN denotes SerpinB2
T14132 12-14 IN denotes in
T14131 3-11 NN denotes increase
T14130 0-2 DT denotes an
R10412 T14131 T14130 arg1Of increase,an
R10413 T14131 T14132 arg1Of increase,in
R10414 T14131 T14136 arg1Of increase,in
R10415 T14135 T14132 arg2Of expression,in
R10416 T14135 T14133 arg1Of expression,SerpinB2
R10417 T14135 T14134 arg1Of expression,mRNA
R10418 T14138 T14136 arg2Of MEFs,in
R10419 T14138 T14137 arg1Of MEFs,wild-type

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T14029 15-23 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T14306 15-23 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

simple1

Id Subject Object Predicate Lexical cue
T14051 15-23 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14284 3-11 Positive_regulation denotes increase
T14283 29-39 Transcription denotes expression
T14262 15-23 Protein denotes SerpinB2
R10525 T14262 T14283 themeOf SerpinB2,expression
R10536 T14283 T14284 themeOf expression,increase

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T14396 15-23 Protein denotes SerpinB2
T14418 29-39 Transcription denotes expression
T14417 3-11 Positive_regulation denotes increase
R10597 T14396 T14418 themeOf SerpinB2,expression
R10614 T14418 T14417 themeOf expression,increase

DLUT931

Id Subject Object Predicate Lexical cue
T14346 3-11 Positive_regulation denotes increase
T14343 29-39 Transcription denotes expression
T14321 15-23 Protein denotes SerpinB2
R10554 T14321 T14343 themeOf SerpinB2,expression
R10568 T14343 T14346 themeOf expression,increase

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14507 43-57 Protein denotes wild-type MEFs
T14504 15-23 Protein denotes SerpinB2
T14501 15-28 Protein denotes SerpinB2 mRNA
T14545 12-39 Gene_expression denotes in SerpinB2 mRNA expression
T14540 0-57 Positive_regulation denotes an increase in SerpinB2 mRNA expression in wild-type MEFs
R10669 T14501 T14545 themeOf SerpinB2 mRNA,in SerpinB2 mRNA expression
R10684 T14545 T14540 themeOf in SerpinB2 mRNA expression,an increase in SerpinB2 mRNA expression in wild-type MEFs

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T14450 3-11 Positive_regulation denotes increase
T14447 29-39 Gene_expression denotes expression
T14444 15-28 Protein denotes SerpinB2 mRNA
R10632 T14444 T14447 themeOf SerpinB2 mRNA,expression
R10634 T14447 T14450 themeOf expression,increase

testone

Id Subject Object Predicate Lexical cue
T13887 24-39 Transcription denotes mRNA expression
T13886 3-11 Positive_regulation denotes increase
T13869 15-23 Protein denotes SerpinB2
R10255 T13869 T13887 themeOf SerpinB2,mRNA expression
R10265 T13887 T13886 themeOf mRNA expression,increase

test3

Id Subject Object Predicate Lexical cue
T13941 24-39 Transcription denotes mRNA expression
T13940 15-23 Protein denotes SerpinB2
T13939 3-11 Positive_regulation denotes increase
T13910 15-23 Protein denotes SerpinB2
R10283 T13940 T13941 themeOf SerpinB2,mRNA expression
R10284 T13941 T13939 themeOf mRNA expression,increase