PMC:3589482 / 31169-31300
Annnotations
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14641 | 130-131 | . | denotes | . |
T14640 | 120-130 | NN | denotes | expression |
T14639 | 115-119 | NNP | denotes | mRNA |
T14638 | 106-114 | NNP | denotes | SerpinB2 |
T14637 | 95-105 | JJ | denotes | endogenous |
T14636 | 84-94 | VBD | denotes | attenuated |
T14635 | 82-83 | NN | denotes | β |
T14634 | 81-82 | : | denotes | - |
T14633 | 76-81 | NNP | denotes | C/EBP |
T14632 | 73-75 | IN | denotes | of |
T14631 | 65-72 | NN | denotes | absence |
T14630 | 61-64 | DT | denotes | the |
T14629 | 57-60 | CC | denotes | and |
T14628 | 48-56 | NNP | denotes | SerpinB2 |
T14627 | 37-47 | JJ | denotes | endogenous |
T14626 | 34-36 | IN | denotes | of |
T14625 | 27-33 | NNS | denotes | levels |
T14624 | 23-26 | JJ | denotes | low |
T14623 | 15-22 | VB | denotes | express |
T14622 | 10-14 | NNS | denotes | MEFs |
T14621 | 0-9 | JJ | denotes | Wild-type |
R10753 | T14621 | T14623 | advmod | Wild-type,express |
R10754 | T14622 | T14623 | nsubj | MEFs,express |
R10755 | T14623 | T14623 | ROOT | express,express |
R10756 | T14624 | T14625 | amod | low,levels |
R10757 | T14625 | T14623 | dobj | levels,express |
R10758 | T14626 | T14625 | prep | of,levels |
R10759 | T14627 | T14628 | compound | endogenous,SerpinB2 |
R10760 | T14628 | T14626 | pobj | SerpinB2,of |
R10761 | T14629 | T14628 | cc | and,SerpinB2 |
R10762 | T14630 | T14631 | det | the,absence |
R10763 | T14631 | T14628 | conj | absence,SerpinB2 |
R10764 | T14632 | T14631 | prep | of,absence |
R10765 | T14633 | T14635 | compound | C/EBP,β |
R10766 | T14634 | T14635 | punct | -,β |
R10767 | T14635 | T14632 | pobj | β,of |
R10768 | T14636 | T14640 | amod | attenuated,expression |
R10769 | T14637 | T14640 | amod | endogenous,expression |
R10770 | T14638 | T14639 | compound | SerpinB2,mRNA |
R10771 | T14639 | T14640 | compound | mRNA,expression |
R10772 | T14640 | T14623 | dobj | expression,express |
R10773 | T14641 | T14623 | punct | .,express |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14127 | 120-130 | NN | denotes | expression |
T14126 | 115-119 | NN | denotes | mRNA |
T14125 | 106-114 | NN | denotes | SerpinB2 |
T14124 | 95-105 | JJ | denotes | endogenous |
T14123 | 84-94 | VB | denotes | attenuated |
T14122 | 76-83 | NN | denotes | C/EBP-β |
T14121 | 73-75 | IN | denotes | of |
T14120 | 65-72 | NN | denotes | absence |
T14119 | 61-64 | DT | denotes | the |
T14118 | 57-60 | CC | denotes | and |
T14117 | 48-56 | NN | denotes | SerpinB2 |
T14116 | 37-47 | JJ | denotes | endogenous |
T14115 | 34-36 | IN | denotes | of |
T14114 | 27-33 | NN | denotes | levels |
T14113 | 23-26 | JJ | denotes | low |
T14112 | 15-22 | VB | denotes | express |
T14111 | 10-14 | NN | denotes | MEFs |
T14110 | 0-9 | JJ | denotes | Wild-type |
R10390 | T14111 | T14110 | arg1Of | MEFs,Wild-type |
R10391 | T14111 | T14112 | arg1Of | MEFs,express |
R10392 | T14112 | T14118 | arg1Of | express,and |
R10393 | T14114 | T14112 | arg2Of | levels,express |
R10394 | T14114 | T14113 | arg1Of | levels,low |
R10395 | T14114 | T14115 | arg1Of | levels,of |
R10396 | T14117 | T14115 | arg2Of | SerpinB2,of |
R10397 | T14117 | T14116 | arg1Of | SerpinB2,endogenous |
R10398 | T14120 | T14119 | arg1Of | absence,the |
R10399 | T14120 | T14121 | arg1Of | absence,of |
R10400 | T14120 | T14123 | arg1Of | absence,attenuated |
R10401 | T14122 | T14121 | arg2Of | C/EBP-β,of |
R10402 | T14123 | T14118 | arg2Of | attenuated,and |
R10403 | T14127 | T14123 | arg2Of | expression,attenuated |
R10404 | T14127 | T14124 | arg1Of | expression,endogenous |
R10405 | T14127 | T14125 | arg1Of | expression,SerpinB2 |
R10406 | T14127 | T14126 | arg1Of | expression,mRNA |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14028 | 106-114 | Protein | denotes | SerpinB2 |
T14027 | 76-83 | Protein | denotes | C/EBP-β |
T14026 | 48-56 | Protein | denotes | SerpinB2 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14298 | 76-83 | http://www.uniprot.org/uniprot/P28033 | denotes | C/EBP-β |
T14305 | 106-114 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T14304 | 48-56 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13962 | 0-131 | Sentence | denotes | Wild-type MEFs express low levels of endogenous SerpinB2 and the absence of C/EBP-β attenuated endogenous SerpinB2 mRNA expression. |
T191 | 0-131 | Sentence | denotes | Wild-type MEFs express low levels of endogenous SerpinB2 and the absence of C/EBP-β attenuated endogenous SerpinB2 mRNA expression. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14050 | 106-114 | Protein | denotes | SerpinB2 |
T14049 | 76-83 | Protein | denotes | C/EBP-β |
T14048 | 48-56 | Protein | denotes | SerpinB2 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14279 | 120-130 | Transcription | denotes | expression |
T14278 | 15-22 | Gene_expression | denotes | express |
T14277 | 84-94 | Negative_regulation | denotes | attenuated |
T14276 | 65-72 | Negative_regulation | denotes | absence |
T14261 | 48-56 | Protein | denotes | SerpinB2 |
T14260 | 106-114 | Protein | denotes | SerpinB2 |
T14259 | 76-83 | Protein | denotes | C/EBP-β |
R10520 | T14259 | T14276 | themeOf | C/EBP-β,absence |
R10521 | T14260 | T14279 | themeOf | SerpinB2,expression |
R10522 | T14261 | T14277 | themeOf | SerpinB2,attenuated |
R10523 | T14261 | T14279 | themeOf | SerpinB2,expression |
R10524 | T14261 | T14278 | themeOf | SerpinB2,express |
R10534 | T14279 | T14277 | themeOf | expression,attenuated |
R10535 | T14279 | T14277 | themeOf | expression,attenuated |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14395 | 48-56 | Protein | denotes | SerpinB2 |
T14394 | 106-114 | Protein | denotes | SerpinB2 |
T14393 | 76-83 | Protein | denotes | C/EBP-β |
T14413 | 15-22 | Gene_expression | denotes | express |
T14412 | 120-130 | Transcription | denotes | expression |
T14411 | 65-72 | Negative_regulation | denotes | absence |
T14410 | 84-94 | Negative_regulation | denotes | attenuated |
R10594 | T14393 | T14411 | themeOf | C/EBP-β,absence |
R10595 | T14394 | T14412 | themeOf | SerpinB2,expression |
R10596 | T14395 | T14413 | themeOf | SerpinB2,express |
R10610 | T14412 | T14410 | themeOf | expression,attenuated |
R10611 | T14413 | T14410 | themeOf | express,attenuated |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14342 | 95-105 | Positive_regulation | denotes | endogenous |
T14341 | 84-94 | Negative_regulation | denotes | attenuated |
T14340 | 120-130 | Transcription | denotes | expression |
T14339 | 65-72 | Negative_regulation | denotes | absence |
T14338 | 23-26 | Positive_regulation | denotes | low |
T14337 | 15-22 | Gene_expression | denotes | express |
T14320 | 48-56 | Protein | denotes | SerpinB2 |
T14319 | 106-114 | Protein | denotes | SerpinB2 |
T14318 | 76-83 | Protein | denotes | C/EBP-β |
R10551 | T14318 | T14339 | themeOf | C/EBP-β,absence |
R10552 | T14319 | T14340 | themeOf | SerpinB2,expression |
R10553 | T14320 | T14337 | themeOf | SerpinB2,express |
R10565 | T14337 | T14338 | themeOf | express,low |
R10566 | T14340 | T14341 | themeOf | expression,attenuated |
R10567 | T14340 | T14342 | themeOf | expression,endogenous |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14531 | 106-119 | Protein | denotes | SerpinB2 mRNA |
T14530 | 73-83 | Protein | denotes | of C/EBP-β |
T14525 | 37-56 | Protein | denotes | endogenous SerpinB2 |
T14520 | 0-14 | Protein | denotes | Wild-type MEFs |
T14514 | 106-114 | Protein | denotes | SerpinB2 |
T14548 | 95-130 | Gene_expression | denotes | endogenous SerpinB2 mRNA expression |
R10679 | T14531 | T14548 | themeOf | SerpinB2 mRNA,endogenous SerpinB2 mRNA expression |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14443 | 120-130 | Gene_expression | denotes | expression |
T14442 | 76-119 | Protein | denotes | C/EBP-β attenuated endogenous SerpinB2 mRNA |
R10631 | T14442 | T14443 | themeOf | C/EBP-β attenuated endogenous SerpinB2 mRNA,expression |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13885 | 115-130 | Transcription | denotes | mRNA expression |
T13884 | 84-94 | Negative_regulation | denotes | attenuated |
T13883 | 15-22 | Gene_expression | denotes | express |
T13868 | 106-114 | Protein | denotes | SerpinB2 |
T13867 | 76-83 | Protein | denotes | C/EBP-β |
T13866 | 48-56 | Protein | denotes | SerpinB2 |
R10252 | T13866 | T13883 | themeOf | SerpinB2,express |
R10253 | T13867 | T13883 | themeOf | C/EBP-β,express |
R10254 | T13868 | T13885 | themeOf | SerpinB2,mRNA expression |
R10264 | T13885 | T13884 | themeOf | mRNA expression,attenuated |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13938 | 115-130 | Transcription | denotes | mRNA expression |
T13937 | 106-114 | Protein | denotes | SerpinB2 |
T13936 | 84-94 | Negative_regulation | denotes | attenuated |
T13935 | 76-83 | Protein | denotes | C/EBP-β |
T13934 | 65-72 | Negative_regulation | denotes | absence |
T13933 | 48-56 | Protein | denotes | SerpinB2 |
T13932 | 15-22 | Gene_expression | denotes | express |
T13909 | 106-114 | Protein | denotes | SerpinB2 |
T13908 | 76-83 | Protein | denotes | C/EBP-β |
T13907 | 48-56 | Protein | denotes | SerpinB2 |
R10280 | T13933 | T13932 | themeOf | SerpinB2,express |
R10281 | T13937 | T13938 | themeOf | SerpinB2,mRNA expression |
R10282 | T13938 | T13936 | themeOf | mRNA expression,attenuated |