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PMC:3589482 / 3050-3266 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2753 215-216 . denotes .
T2752 206-215 VBN denotes described
T2751 201-205 VBN denotes been
T2750 196-200 VBP denotes have
T2749 194-195 , denotes ,
T2748 193-194 NNP denotes ]
T2747 191-193 CD denotes 28
T2746 190-191 NNP denotes [
T2745 188-189 NNP denotes ]
T2744 186-188 CD denotes 24
T2743 185-186 NNP denotes [
T2742 176-184 NN denotes immunity
T2741 169-175 JJ denotes innate
T2740 165-168 CC denotes and
T2739 163-164 NNP denotes ]
T2738 161-163 CD denotes 23
T2737 160-161 NNP denotes [
T2736 158-159 : denotes ;
T2735 157-158 NNP denotes ]
T2734 155-157 CD denotes 22
T2733 154-155 NNP denotes [
T2732 152-153 : denotes ;
T2731 151-152 NNP denotes ]
T2730 149-151 CD denotes 15
T2729 148-149 NNP denotes [
T2728 135-147 NN denotes transduction
T2727 128-134 NN denotes signal
T2726 126-127 , denotes ,
T2725 125-126 NNP denotes ]
T2724 123-125 CD denotes 21
T2723 122-123 NNP denotes [
T2722 120-121 NNP denotes ]
T2721 118-120 CD denotes 18
T2720 117-118 NNP denotes [
T2719 101-116 NN denotes differentiation
T2718 97-100 CC denotes and
T2717 83-96 NN denotes proliferation
T2716 81-82 , denotes ,
T2715 80-81 NNP denotes ]
T2714 78-80 CD denotes 17
T2713 77-78 NNP denotes [
T2712 75-76 NNP denotes ]
T2711 73-75 CD denotes 11
T2710 72-73 NNP denotes [
T2709 63-71 NN denotes survival
T2708 58-62 NN denotes cell
T2707 55-57 IN denotes in
T2706 46-54 NNP denotes SerpinB2
T2705 42-45 IN denotes for
T2704 36-41 NNS denotes roles
T2703 22-35 JJ denotes intracellular
T2702 20-21 , denotes ,
T2701 14-20 NN denotes decade
T2700 9-13 JJ denotes past
T2699 5-8 DT denotes the
T2698 0-4 IN denotes Over
R1791 T2733 T2722 conj [,]
R1792 T2734 T2735 nummod 22,]
R1794 T2735 T2722 conj ],]
R1795 T2736 T2715 punct ;,]
R1796 T2737 T2739 nmod [,]
R1798 T2738 T2739 nummod 23,]
R1799 T2739 T2715 conj ],]
R1800 T2740 T2739 cc and,]
R1802 T2741 T2742 amod innate,immunity
R1803 T2742 T2739 conj immunity,]
R1804 T2743 T2745 nmod [,]
R1806 T2744 T2745 nummod 24,]
R1807 T2745 T2742 appos ],immunity
R1808 T2746 T2748 compound [,]
R1809 T2747 T2748 compound 28,]
R1810 T2748 T2745 appos ],]
R1811 T2749 T2752 punct ",",described
R1813 T2750 T2752 aux have,described
R1814 T2751 T2752 auxpass been,described
R1815 T2752 T2752 ROOT described,described
R1817 T2753 T2752 punct .,described
R1979 T2698 T2752 prep Over,described
R1983 T2699 T2701 det the,decade
R1988 T2700 T2701 amod past,decade
R1992 T2701 T2698 pobj decade,Over
R1995 T2702 T2752 punct ",",described
R2000 T2703 T2704 amod intracellular,roles
R2003 T2704 T2752 nsubjpass roles,described
R2007 T2705 T2704 prep for,roles
R2014 T2706 T2705 pobj SerpinB2,for
R2019 T2707 T2704 prep in,roles
R2022 T2708 T2709 compound cell,survival
R2026 T2709 T2707 pobj survival,in
R2031 T2710 T2712 nmod [,]
R2035 T2711 T2712 nummod 11,]
R2039 T2712 T2713 meta ],[
R2043 T2713 T2715 nmod [,]
R2047 T2714 T2715 nummod 17,]
R2051 T2715 T2752 nsubj ],described
R2052 T2716 T2715 punct ",",]
R2053 T2717 T2715 conj proliferation,]
R2057 T2718 T2717 cc and,proliferation
R2063 T2719 T2717 conj differentiation,proliferation
R2068 T2720 T2722 nmod [,]
R2072 T2721 T2722 nummod 18,]
R2076 T2722 T2719 appos ],differentiation
R2079 T2723 T2725 nmod [,]
R2082 T2724 T2725 nummod 21,]
R2087 T2725 T2722 conj ],]
R2090 T2726 T2725 punct ",",]
R2094 T2727 T2728 compound signal,transduction
R2098 T2728 T2729 compound transduction,[
R2102 T2729 T2725 conj [,]
R2107 T2730 T2731 nummod 15,]
R2113 T2731 T2729 conj ],[
R2118 T2732 T2722 punct ;,]

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1683 206-215 VB denotes described
T1682 201-205 VB denotes been
T1681 196-200 VB denotes have
T1680 194-195 -COMMA- denotes ,
T1679 193-194 -RRB- denotes ]
T1678 191-193 CD denotes 28
T1677 190-191 -LRB- denotes [
T1676 189-190 CD denotes –
T1675 188-189 -RRB- denotes ]
T1674 186-188 CD denotes 24
T1673 185-186 -LRB- denotes [
T1672 176-184 NN denotes immunity
T1671 169-175 JJ denotes innate
T1670 165-168 CC denotes and
T1669 163-164 -RRB- denotes ]
T1668 161-163 CD denotes 23
T1667 160-161 -LRB- denotes [
T1666 158-159 -COLON- denotes ;
T1665 157-158 -RRB- denotes ]
T1664 155-157 CD denotes 22
T1663 154-155 -LRB- denotes [
T1662 152-153 -COLON- denotes ;
T1661 151-152 -RRB- denotes ]
T1660 149-151 CD denotes 15
T1659 148-149 -LRB- denotes [
T1658 135-147 NN denotes transduction
T1657 128-134 NN denotes signal
T1656 126-127 -COMMA- denotes ,
T1655 125-126 -RRB- denotes ]
T1654 123-125 CD denotes 21
T1653 122-123 -LRB- denotes [
T1652 121-122 CD denotes –
T1651 120-121 -RRB- denotes ]
T1650 118-120 CD denotes 18
T1649 117-118 -LRB- denotes [
T1648 101-116 NN denotes differentiation
T1647 97-100 CC denotes and
T1646 83-96 NN denotes proliferation
T1645 81-82 -COMMA- denotes ,
T1644 80-81 -RRB- denotes ]
T1643 78-80 CD denotes 17
T1642 77-78 -LRB- denotes [
T1641 76-77 CD denotes –
T1640 75-76 -RRB- denotes ]
T1639 73-75 CD denotes 11
T1638 72-73 -LRB- denotes [
T1637 63-71 NN denotes survival
T1636 58-62 NN denotes cell
T1635 55-57 IN denotes in
T1634 46-54 NN denotes SerpinB2
T1633 42-45 IN denotes for
T1632 36-41 NN denotes roles
T1631 22-35 JJ denotes intracellular
T1630 20-21 -COMMA- denotes ,
T1629 14-20 NN denotes decade
T1628 9-13 JJ denotes past
T1627 5-8 DT denotes the
T1626 0-4 IN denotes Over
R1027 T1629 T1626 arg2Of decade,Over
R1028 T1629 T1627 arg1Of decade,the
R1029 T1629 T1628 arg1Of decade,past
R1030 T1632 T1631 arg1Of roles,intracellular
R1031 T1632 T1633 arg1Of roles,for
R1032 T1632 T1681 arg1Of roles,have
R1033 T1632 T1682 arg1Of roles,been
R1034 T1632 T1683 arg2Of roles,described
R1035 T1634 T1633 arg2Of SerpinB2,for
R1036 T1634 T1635 arg1Of SerpinB2,in
R1037 T1639 T1638 arg2Of 11,[
R1038 T1640 T1638 arg3Of ],[
R1039 T1641 T1636 arg1Of –,cell
R1040 T1641 T1637 arg1Of –,survival
R1041 T1641 T1638 arg1Of –,[
R1042 T1641 T1642 arg1Of –,[
R1043 T1641 T1645 arg1Of –,","
R1044 T1643 T1642 arg2Of 17,[
R1045 T1644 T1642 arg3Of ],[
R1046 T1645 T1647 arg1Of ",",and
R1047 T1646 T1645 arg2Of proliferation,","
R1048 T1647 T1656 arg1Of and,","
R1049 T1650 T1649 arg2Of 18,[
R1050 T1651 T1649 arg3Of ],[
R1051 T1652 T1647 arg2Of –,and
R1052 T1652 T1648 arg1Of –,differentiation
R1053 T1652 T1649 arg1Of –,[
R1054 T1652 T1653 arg1Of –,[
R1055 T1654 T1653 arg2Of 21,[
R1056 T1655 T1653 arg3Of ],[
R1057 T1656 T1662 arg1Of ",",;
R1058 T1656 T1663 arg1Of ",",[
R1059 T1656 T1666 arg1Of ",",;
R1060 T1656 T1667 arg1Of ",",[
R1061 T1656 T1670 arg1Of ",",and
R1062 T1658 T1656 arg2Of transduction,","
R1063 T1658 T1657 arg1Of transduction,signal
R1064 T1658 T1659 arg1Of transduction,[
R1065 T1660 T1659 arg2Of 15,[
R1066 T1661 T1659 arg3Of ],[
R1067 T1664 T1663 arg2Of 22,[
R1068 T1665 T1663 arg3Of ],[
R1069 T1668 T1667 arg2Of 23,[
R1070 T1669 T1667 arg3Of ],[
R1071 T1670 T1635 arg2Of and,in
R1072 T1674 T1673 arg2Of 24,[
R1073 T1675 T1673 arg3Of ],[
R1074 T1676 T1670 arg2Of –,and
R1075 T1676 T1671 arg1Of –,innate
R1076 T1676 T1672 arg1Of –,immunity
R1077 T1676 T1673 arg1Of –,[
R1078 T1676 T1677 arg1Of –,[
R1079 T1678 T1677 arg2Of 28,[
R1080 T1679 T1677 arg3Of ],[
R1081 T1683 T1626 arg1Of described,Over
R1082 T1683 T1630 arg1Of described,","
R1083 T1683 T1680 arg1Of described,","
R1084 T1683 T1681 arg2Of described,have
R1085 T1683 T1682 arg2Of described,been

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1306 46-54 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2109 46-54 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T1358 135-147 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T1356 128-147 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T1353 128-134 http://purl.obolibrary.org/obo/GO_0023052 denotes signal

GO-CC

Id Subject Object Predicate Lexical cue
T1396 22-35 http://purl.obolibrary.org/obo/GO_0005622 denotes intracellular
T1390 58-62 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T1211 0-216 Sentence denotes Over the past decade, intracellular roles for SerpinB2 in cell survival [11]–[17], proliferation and differentiation [18]–[21], signal transduction [15]; [22]; [23] and innate immunity [24]–[28], have been described.
T21 0-216 Sentence denotes Over the past decade, intracellular roles for SerpinB2 in cell survival [11]–[17], proliferation and differentiation [18]–[21], signal transduction [15]; [22]; [23] and innate immunity [24]–[28], have been described.

simple1

Id Subject Object Predicate Lexical cue
T1404 46-54 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T2062 46-54 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2221 46-54 Protein denotes SerpinB2

DLUT931

Id Subject Object Predicate Lexical cue
T2140 46-54 Protein denotes SerpinB2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2407 22-35 Entity denotes intracellular
T2404 46-82 Protein denotes SerpinB2 in cell survival [11]–[17],

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T2276 46-54 Protein denotes SerpinB2

testone

Id Subject Object Predicate Lexical cue
T1101 46-54 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T1168 46-54 Protein denotes SerpinB2
T1142 46-54 Protein denotes SerpinB2