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PMC:3589482 / 29546-29651 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13611 97-105 NNP denotes Promoter
T13610 88-96 NNP denotes Proximal
T13609 79-87 NNP denotes SerpinB2
T13608 75-78 DT denotes the
T13607 72-74 IN denotes of
T13606 64-71 NNP denotes Element
T13605 58-63 NNP denotes C/EBP
T13604 54-57 DT denotes the
T13603 51-53 TO denotes to
T13602 45-50 VBZ denotes Binds
T13601 40-44 WDT denotes that
T13600 33-39 NNP denotes Factor
T13599 25-32 NNP denotes Nuclear
T13598 13-24 JJ denotes LPS-induced
T13597 11-12 DT denotes a
T13596 8-10 VBZ denotes is
T13595 6-7 NN denotes β
T13594 5-6 : denotes -
T13593 0-5 SYM denotes C/EBP
R10013 T13593 T13595 amod C/EBP,β
R10014 T13594 T13595 punct -,β
R10015 T13595 T13596 nsubj β,is
R10016 T13596 T13596 ROOT is,is
R10017 T13597 T13600 det a,Factor
R10018 T13598 T13600 amod LPS-induced,Factor
R10019 T13599 T13600 compound Nuclear,Factor
R10021 T13601 T13602 nsubj that,Binds
R10022 T13602 T13600 relcl Binds,Factor
R10023 T13603 T13602 prep to,Binds
R10024 T13604 T13606 det the,Element
R10025 T13605 T13606 compound C/EBP,Element
R10026 T13606 T13603 pobj Element,to
R10027 T13607 T13606 prep of,Element
R10028 T13608 T13610 det the,Proximal
R10029 T13609 T13610 compound SerpinB2,Proximal
R10030 T13610 T13607 pobj Proximal,of
R10031 T13611 T13610 prep Promoter,Proximal

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T13270 97-105 NN denotes Promoter
T13269 88-96 JJ denotes Proximal
T13268 79-87 NN denotes SerpinB2
T13267 75-78 DT denotes the
T13266 72-74 IN denotes of
T13265 64-71 NN denotes Element
T13264 58-63 NN denotes C/EBP
T13263 54-57 DT denotes the
T13262 51-53 TO denotes to
T13261 45-50 VB denotes Binds
T13260 40-44 WDT denotes that
T13259 33-39 NN denotes Factor
T13258 25-32 JJ denotes Nuclear
T13257 13-24 JJ denotes LPS-induced
T13256 11-12 DT denotes a
T13255 8-10 VB denotes is
T13254 0-7 NN denotes C/EBP-β
R9773 T13254 T13255 arg1Of C/EBP-β,is
R9774 T13259 T13255 arg2Of Factor,is
R9775 T13259 T13256 arg1Of Factor,a
R9776 T13259 T13257 arg1Of Factor,LPS-induced
R9777 T13259 T13258 arg1Of Factor,Nuclear
R9778 T13259 T13260 arg1Of Factor,that
R9779 T13259 T13261 arg1Of Factor,Binds
R9780 T13261 T13262 arg1Of Binds,to
R9781 T13265 T13262 arg2Of Element,to
R9782 T13265 T13263 arg1Of Element,the
R9783 T13265 T13264 arg1Of Element,C/EBP
R9784 T13265 T13266 arg1Of Element,of
R9785 T13270 T13266 arg2Of Promoter,of
R9786 T13270 T13267 arg1Of Promoter,the
R9787 T13270 T13268 arg1Of Promoter,SerpinB2
R9788 T13270 T13269 arg1Of Promoter,Proximal

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T13180 25-39 Antecedent denotes Nuclear Factor
T13179 40-44 Anaphor denotes that
T13178 0-7 Antecedent denotes C/EBP-β
T13177 25-39 Anaphor denotes Nuclear Factor
R9767 T13177 T13178 boundBy Nuclear Factor,C/EBP-β
R9768 T13179 T13177 boundBy that,Nuclear Factor

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T13187 79-87 Protein denotes SerpinB2
T13186 0-7 Protein denotes C/EBP-β

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13471 79-87 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T13466 0-7 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β

sentences

Id Subject Object Predicate Lexical cue
T13141 0-105 Sentence denotes C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter
T181 0-105 Sentence denotes C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter

simple1

Id Subject Object Predicate Lexical cue
T13231 79-87 Protein denotes SerpinB2
T13230 0-7 Protein denotes C/EBP-β

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T13465 13-24 Positive_regulation denotes LPS-induced
T13464 45-50 Binding denotes Binds
T13453 79-87 Protein denotes SerpinB2
T13452 0-7 Protein denotes C/EBP-β
R9977 T13452 T13465 themeOf C/EBP-β,LPS-induced
R9978 T13452 T13464 themeOf C/EBP-β,Binds

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13510 13-24 Positive_regulation denotes LPS-induced
T13509 45-50 Binding denotes Binds
T13498 79-87 Protein denotes SerpinB2
T13497 0-7 Protein denotes C/EBP-β
R9981 T13497 T13510 themeOf C/EBP-β,LPS-induced
R9982 T13497 T13509 themeOf C/EBP-β,Binds

DLUT931

Id Subject Object Predicate Lexical cue
T13484 45-50 Binding denotes Binds
T13473 79-87 Protein denotes SerpinB2
T13472 0-7 Protein denotes C/EBP-β
R9979 T13472 T13484 themeOf C/EBP-β,Binds
R9980 T13473 T13484 themeOf SerpinB2,Binds

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T13591 58-63 Protein denotes C/EBP
T13587 0-7 Protein denotes C/EBP-β
T13586 79-87 Protein denotes SerpinB2
T13572 13-24 Entity denotes LPS-induced
T13565 72-105 Entity denotes of the SerpinB2 Proximal Promoter

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T13511 0-7 Protein denotes C/EBP-β
T13518 45-50 Binding denotes Binds
T13517 45-50 Binding denotes Binds
T13516 45-50 Binding denotes Binds
T13515 45-50 Binding denotes Binds
T13514 97-105 Entity denotes Promoter
T13513 79-96 Protein denotes SerpinB2 Proximal
T13512 58-71 Protein denotes C/EBP Element
R9983 T13511 T13515 themeOf C/EBP-β,Binds
R9984 T13511 T13516 themeOf C/EBP-β,Binds
R9985 T13511 T13518 themeOf C/EBP-β,Binds
R9986 T13512 T13515 themeOf C/EBP Element,Binds
R9987 T13512 T13517 themeOf C/EBP Element,Binds
R9988 T13512 T13518 themeOf C/EBP Element,Binds
R9989 T13513 T13516 themeOf SerpinB2 Proximal,Binds
R9990 T13513 T13517 themeOf SerpinB2 Proximal,Binds
R9991 T13513 T13518 themeOf SerpinB2 Proximal,Binds
R9992 T13513 T13514 partOf SerpinB2 Proximal,Promoter
R9993 T13514 T13515 Site Promoter,Binds
R9994 T13514 T13516 Site Promoter,Binds
R9995 T13514 T13517 Site Promoter,Binds
R9996 T13514 T13518 Site Promoter,Binds

testone

Id Subject Object Predicate Lexical cue
T13113 97-105 Entity denotes Promoter
T13112 64-71 Entity denotes Element
T13111 45-50 Binding denotes Binds
T13110 17-24 Positive_regulation denotes induced
T13099 79-87 Protein denotes SerpinB2
T13098 0-7 Protein denotes C/EBP-β
R9745 T13098 T13110 causeOf C/EBP-β,induced
R9746 T13098 T13111 themeOf C/EBP-β,Binds
R9747 T13111 T13110 themeOf Binds,induced
R9748 T13113 T13111 themeOf Promoter,Binds

test3

Id Subject Object Predicate Lexical cue
T13130 79-87 Protein denotes SerpinB2
T13129 45-50 Binding denotes Binds
T13128 17-24 Positive_regulation denotes induced
T13127 0-7 Protein denotes C/EBP-β
T13116 79-87 Protein denotes SerpinB2
T13115 0-7 Protein denotes C/EBP-β
R9749 T13127 T13129 themeOf C/EBP-β,Binds