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PMC:3589482 / 24557-24688 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T12065 118-131 NNP denotes Transcription
T12064 104-117 NNP denotes LPS-inducible
T12063 96-103 NNP denotes Optimal
T12062 92-95 IN denotes for
T12061 82-91 JJ denotes Essential
T12060 78-81 VBP denotes are
T12059 69-77 NNP denotes Promoter
T12058 60-68 NNP denotes Proximal
T12057 55-59 NNP denotes Gene
T12056 46-54 NNP denotes SerpinB2
T12055 39-45 NNP denotes Murine
T12054 35-38 DT denotes the
T12053 32-34 IN denotes in
T12052 26-31 NNS denotes Sites
T12051 21-25 JJ denotes AP-1
T12050 17-20 CD denotes Two
T12049 13-16 CC denotes and
T12048 9-12 NNP denotes CRE
T12047 7-8 , denotes ,
T12046 2-7 NNP denotes C/EBP
T12045 0-1 DT denotes A
R8845 T12045 T12052 det A,Sites
R8846 T12046 T12052 nmod C/EBP,Sites
R8847 T12047 T12046 punct ",",C/EBP
R8848 T12048 T12046 conj CRE,C/EBP
R8849 T12049 T12048 cc and,CRE
R8850 T12050 T12052 nummod Two,Sites
R8851 T12051 T12052 amod AP-1,Sites
R8852 T12052 T12052 ROOT Sites,Sites
R8853 T12053 T12052 prep in,Sites
R8854 T12054 T12056 det the,SerpinB2
R8855 T12055 T12056 compound Murine,SerpinB2
R8856 T12056 T12053 pobj SerpinB2,in
R8857 T12057 T12058 compound Gene,Proximal
R8858 T12058 T12056 appos Proximal,SerpinB2
R8859 T12059 T12060 nsubj Promoter,are
R8860 T12060 T12060 ROOT are,are
R8861 T12061 T12060 acomp Essential,are
R8863 T12063 T12065 compound Optimal,Transcription
R8864 T12064 T12065 compound LPS-inducible,Transcription

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T11584 118-131 NN denotes Transcription
T11583 104-117 JJ denotes LPS-inducible
T11582 96-103 JJ denotes Optimal
T11581 92-95 IN denotes for
T11580 82-91 JJ denotes Essential
T11579 78-81 VB denotes are
T11578 69-77 NNP denotes Promoter
T11577 60-68 NNP denotes Proximal
T11576 55-59 NNP denotes Gene
T11575 46-54 NNP denotes SerpinB2
T11574 39-45 NNP denotes Murine
T11573 35-38 DT denotes the
T11572 32-34 IN denotes in
T11571 26-31 NN denotes Sites
T11570 21-25 NN denotes AP-1
T11569 17-20 CD denotes Two
T11568 13-16 CC denotes and
T11567 9-12 NN denotes CRE
T11566 7-8 -COMMA- denotes ,
T11565 2-7 NN denotes C/EBP
T11564 0-1 DT denotes A
R8509 T11565 T11566 arg1Of C/EBP,","
R8510 T11566 T11568 arg1Of ",",and
R8511 T11567 T11566 arg2Of CRE,","
R8512 T11569 T11568 arg2Of Two,and
R8513 T11571 T11564 arg1Of Sites,A
R8514 T11571 T11565 arg1Of Sites,C/EBP
R8515 T11571 T11567 arg1Of Sites,CRE
R8516 T11571 T11569 arg1Of Sites,Two
R8517 T11571 T11570 arg1Of Sites,AP-1
R8518 T11571 T11572 arg1Of Sites,in
R8519 T11571 T11579 arg1Of Sites,are
R8520 T11571 T11580 arg1Of Sites,Essential
R8521 T11578 T11572 arg2Of Promoter,in
R8522 T11578 T11573 arg1Of Promoter,the
R8523 T11578 T11574 arg1Of Promoter,Murine
R8524 T11578 T11575 arg1Of Promoter,SerpinB2
R8525 T11578 T11576 arg1Of Promoter,Gene
R8526 T11578 T11577 arg1Of Promoter,Proximal
R8527 T11580 T11579 arg2Of Essential,are
R8528 T11580 T11581 arg1Of Essential,for
R8529 T11584 T11581 arg2Of Transcription,for
R8530 T11584 T11582 arg1Of Transcription,Optimal
R8531 T11584 T11583 arg1Of Transcription,LPS-inducible

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11521 46-54 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T11878 46-54 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T11874 21-25 http://www.uniprot.org/uniprot/P05412 denotes AP-1

GO-BP

Id Subject Object Predicate Lexical cue
T11531 118-131 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription

sentences

Id Subject Object Predicate Lexical cue
T11443 0-131 Sentence denotes A C/EBP, CRE and Two AP-1 Sites in the Murine SerpinB2 Gene Proximal Promoter are Essential for Optimal LPS-inducible Transcription
T158 0-131 Sentence denotes A C/EBP, CRE and Two AP-1 Sites in the Murine SerpinB2 Gene Proximal Promoter are Essential for Optimal LPS-inducible Transcription

simple1

Id Subject Object Predicate Lexical cue
T11554 46-54 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T11854 46-54 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T11918 46-54 Protein denotes SerpinB2

DLUT931

Id Subject Object Predicate Lexical cue
T11903 46-54 Protein denotes SerpinB2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T12043 2-131 Regulation denotes C/EBP, CRE and Two AP-1 Sites in the Murine SerpinB2 Gene Proximal Promoter are Essential for Optimal LPS-inducible Transcription
T12042 2-131 Regulation denotes C/EBP, CRE and Two AP-1 Sites in the Murine SerpinB2 Gene Proximal Promoter are Essential for Optimal LPS-inducible Transcription
T12041 2-131 Regulation denotes C/EBP, CRE and Two AP-1 Sites in the Murine SerpinB2 Gene Proximal Promoter are Essential for Optimal LPS-inducible Transcription
T12031 17-77 Entity denotes Two AP-1 Sites in the Murine SerpinB2 Gene Proximal Promoter
T12025 35-77 Entity denotes the Murine SerpinB2 Gene Proximal Promoter
T12008 2-7 Protein denotes C/EBP
T12007 9-12 Protein denotes CRE
T12003 21-25 Protein denotes AP-1
T11998 46-54 Protein denotes SerpinB2
T11986 35-77 Protein denotes the Murine SerpinB2 Gene Proximal Promoter
R8840 T12007 T12043 causeOf CRE,"C/EBP, CRE and Two AP-1 Sites in the Murine SerpinB2 Gene Proximal Promoter are Essential for Optimal LPS-inducible Transcription"
R8841 T12008 T12041 causeOf C/EBP,"C/EBP, CRE and Two AP-1 Sites in the Murine SerpinB2 Gene Proximal Promoter are Essential for Optimal LPS-inducible Transcription"
R8844 T12031 T12042 causeOf Two AP-1 Sites in the Murine SerpinB2 Gene Proximal Promoter,"C/EBP, CRE and Two AP-1 Sites in the Murine SerpinB2 Gene Proximal Promoter are Essential for Optimal LPS-inducible Transcription"

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T11932 118-131 Transcription denotes Transcription
T11931 2-7 Protein denotes C/EBP
R8819 T11931 T11932 themeOf C/EBP,Transcription

testone

Id Subject Object Predicate Lexical cue
T11402 46-54 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T11427 46-54 Protein denotes SerpinB2
T11417 46-54 Protein denotes SerpinB2