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PMC:3589482 / 23996-24555 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T23695 283-284 : denotes ;
T23694 276-283 NN denotes element
T23693 267-275 NN denotes response
T23692 262-266 NNP denotes cAMP
T23691 260-261 SYM denotes =
T23690 256-259 NNP denotes CRE
T23689 254-255 : denotes ;
T23688 247-254 NN denotes protein
T23687 239-246 JJ denotes binding
T23686 230-238 NN denotes enhancer
T23685 224-229 NNP denotes CCAAT
T23684 221-222 SYM denotes =
T23683 215-220 NNP denotes C/EBP
T23682 213-214 : denotes ;
T23681 212-213 CD denotes 1
T23680 204-211 NN denotes protein
T23679 194-203 NN denotes activator
T23678 191-192 SYM denotes =
T23677 186-190 CD denotes AP-1
T23676 184-185 . denotes .
T23675 177-184 VBN denotes labeled
T23674 173-176 CC denotes and
T23673 167-172 VBN denotes boxed
T23672 163-166 VBP denotes are
T23671 153-162 NNS denotes promoters
T23670 144-152 NNP denotes SerpinB2
T23669 137-143 JJ denotes murine
T23668 133-136 CC denotes and
T23667 127-132 JJ denotes human
T23666 123-126 DT denotes the
T23665 115-122 IN denotes between
T23664 105-114 VBD denotes conserved
T23663 96-104 NNS denotes elements
T23662 85-95 JJ denotes Cis-acting
T23661 83-84 . denotes .
T23660 75-83 NN denotes software
T23659 73-74 NNP denotes W
T23658 65-72 JJ denotes Clustal
T23657 59-64 VBG denotes using
T23656 51-58 VBN denotes aligned
T23655 46-50 VBD denotes were
T23654 36-45 NNS denotes sequences
T23653 25-35 NN denotes nucleotide
T23652 19-24 JJ denotes human
T23651 15-18 CC denotes and
T23650 9-14 NNP denotes Mouse
T23649 7-8 . denotes .
T23648 6-7 CD denotes 1
T23647 5-6 NN denotes −
T23646 4-5 CD denotes /
T23645 1-4 CD denotes 563
T23644 0-1 NN denotes −
T23752 558-559 . denotes .
T23751 553-558 VBN denotes shown
T23750 548-552 RB denotes also
T23749 544-547 VBP denotes are
T23748 533-543 NNS denotes constructs
T23747 524-532 NN denotes reporter
T23746 521-523 CD denotes 87
T23745 520-521 CD denotes −
T23744 516-519 CC denotes and
T23743 512-515 CD denotes 189
T23742 511-512 CD denotes −
T23741 509-510 , denotes ,
T23740 506-509 CD denotes 539
T23739 505-506 NN denotes −
T23738 501-504 DT denotes the
T23737 498-500 IN denotes of
T23736 493-497 NNS denotes ends
T23735 491-492 '' denotes '
T23734 490-491 CD denotes 5
T23733 486-489 DT denotes the
T23732 483-485 IN denotes of
T23731 474-482 NN denotes location
T23730 470-473 DT denotes The
T23729 468-469 . denotes .
T23728 459-468 NN denotes uppercase
T23727 456-458 IN denotes in
T23726 446-455 VBN denotes presented
T23725 443-445 VBZ denotes is
T23724 441-442 CD denotes 1
T23723 436-440 VB denotes exon
T23722 432-435 CC denotes and
T23721 422-431 VBN denotes indicated
T23720 419-421 VBZ denotes is
T23719 417-418 -RRB- denotes )
T23718 414-417 FW denotes tis
T23717 413-414 -LRB- denotes (
T23716 408-412 NN denotes site
T23715 397-407 NN denotes initiation
T23714 383-396 NN denotes transcription
T23713 374-382 JJ denotes putative
T23712 370-373 DT denotes The
T23711 368-369 . denotes .
T23710 367-368 CD denotes 1
T23709 359-366 NN denotes protein
T23708 351-358 JJ denotes binding
T23707 347-350 NN denotes box
T23706 340-346 VB denotes purine
T23705 337-338 SYM denotes =
T23704 334-336 CD denotes .1
T23703 332-334 NNP denotes PU
T23702 330-331 : denotes ;
T23701 322-330 NNP denotes 1/POU2F1
T23700 315-321 NN denotes factor
T23699 301-314 NN denotes transcription
T23698 293-300 JJR denotes octamer
T23697 290-291 SYM denotes =
T23696 285-289 NNP denotes Oct1
R16997 T23644 T23648 nmod −,1
R16998 T23645 T23644 nummod 563,−
R16999 T23646 T23648 nummod /,1
R17000 T23647 T23648 compound −,1
R17003 T23650 T23656 nsubjpass Mouse,aligned
R17004 T23651 T23650 cc and,Mouse
R17005 T23652 T23654 amod human,sequences
R17006 T23653 T23654 compound nucleotide,sequences
R17007 T23654 T23650 conj sequences,Mouse
R17008 T23655 T23656 auxpass were,aligned
R17009 T23656 T23656 ROOT aligned,aligned
R17010 T23657 T23656 advcl using,aligned
R17011 T23658 T23660 amod Clustal,software
R17012 T23659 T23660 compound W,software
R17013 T23660 T23657 dobj software,using
R17014 T23661 T23656 punct .,aligned
R17015 T23662 T23663 amod Cis-acting,elements
R17016 T23663 T23664 nsubj elements,conserved
R17017 T23664 T23664 ROOT conserved,conserved
R17018 T23665 T23664 prep between,conserved
R17019 T23666 T23671 det the,promoters
R17020 T23667 T23671 amod human,promoters
R17021 T23668 T23667 cc and,human
R17022 T23669 T23667 conj murine,human
R17023 T23670 T23671 compound SerpinB2,promoters
R17024 T23671 T23665 pobj promoters,between
R17025 T23672 T23673 auxpass are,boxed
R17026 T23673 T23664 conj boxed,conserved
R17027 T23674 T23673 cc and,boxed
R17028 T23675 T23673 conj labeled,boxed
R17029 T23676 T23664 punct .,conserved
R17030 T23677 T23680 nummod AP-1,protein
R17031 T23678 T23679 punct =,activator
R17032 T23679 T23680 compound activator,protein
R17033 T23680 T23680 ROOT protein,protein
R17034 T23681 T23680 nummod 1,protein
R17035 T23682 T23686 punct ;,enhancer
R17036 T23683 T23686 compound C/EBP,enhancer
R17037 T23684 T23685 punct =,CCAAT
R17038 T23685 T23686 compound CCAAT,enhancer
R17039 T23686 T23680 appos enhancer,protein
R17040 T23687 T23688 amod binding,protein
R17041 T23688 T23686 appos protein,enhancer
R17042 T23689 T23686 punct ;,enhancer
R17043 T23690 T23692 nmod CRE,cAMP
R17044 T23691 T23692 punct =,cAMP
R17045 T23692 T23694 compound cAMP,element
R17046 T23693 T23694 compound response,element
R17047 T23694 T23686 appos element,enhancer
R17048 T23695 T23701 punct ;,1/POU2F1
R17049 T23696 T23701 compound Oct1,1/POU2F1
R17050 T23697 T23698 punct =,octamer
R17051 T23698 T23700 amod octamer,factor
R17052 T23699 T23700 compound transcription,factor
R17053 T23700 T23701 compound factor,1/POU2F1
R17054 T23701 T23686 appos 1/POU2F1,enhancer
R17055 T23702 T23701 punct ;,1/POU2F1
R17056 T23703 T23707 nmod PU,box
R17057 T23704 T23703 nummod .1,PU
R17058 T23705 T23706 punct =,purine
R17059 T23706 T23707 compound purine,box
R17060 T23707 T23709 compound box,protein
R17061 T23708 T23709 amod binding,protein
R17062 T23709 T23701 appos protein,1/POU2F1
R17063 T23710 T23709 nummod 1,protein
R17064 T23711 T23686 punct .,enhancer
R17065 T23712 T23716 det The,site
R17066 T23713 T23716 amod putative,site
R17067 T23714 T23715 compound transcription,initiation
R17068 T23715 T23716 compound initiation,site
R17069 T23716 T23721 nsubjpass site,indicated
R17070 T23717 T23716 punct (,site
R17071 T23718 T23716 appos tis,site
R17072 T23719 T23716 punct ),site
R17073 T23720 T23721 auxpass is,indicated
R17074 T23721 T23721 ROOT indicated,indicated
R17075 T23722 T23721 cc and,indicated
R17076 T23723 T23726 nsubjpass exon,presented
R17077 T23724 T23723 nummod 1,exon
R17078 T23725 T23726 auxpass is,presented
R17079 T23726 T23721 conj presented,indicated
R17080 T23727 T23726 prep in,presented
R17081 T23728 T23727 pobj uppercase,in
R17082 T23729 T23726 punct .,presented
R17083 T23730 T23731 det The,location
R17084 T23731 T23736 nsubj location,ends
R17085 T23732 T23731 prep of,location
R17086 T23733 T23734 det the,5
R17087 T23734 T23732 pobj 5,of
R17088 T23735 T23736 punct ',ends
R17089 T23736 T23751 nsubjpass ends,shown
R17090 T23737 T23736 prep of,ends
R17091 T23738 T23739 det the,−
R17092 T23739 T23737 pobj −,of
R17093 T23740 T23739 nummod 539,−
R17094 T23741 T23739 punct ",",−
R17095 T23742 T23743 nummod −,189
R17096 T23743 T23739 conj 189,−
R17097 T23744 T23743 cc and,189
R17098 T23745 T23748 nmod −,constructs
R17099 T23746 T23748 nummod 87,constructs
R17100 T23747 T23748 compound reporter,constructs
R17101 T23748 T23736 conj constructs,ends
R17102 T23749 T23751 auxpass are,shown
R17103 T23750 T23751 advmod also,shown
R17104 T23751 T23751 ROOT shown,shown
R17105 T23752 T23751 punct .,shown

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T23538 553-558 VB denotes shown
T23537 548-552 RB denotes also
T23536 544-547 VB denotes are
T23535 533-543 NN denotes constructs
T23534 524-532 NN denotes reporter
T23533 520-523 CD denotes −87
T23532 516-519 CC denotes and
T23531 511-515 CD denotes −189
T23530 509-510 -COMMA- denotes ,
T23529 505-509 CD denotes −539
T23528 501-504 DT denotes the
T23527 498-500 IN denotes of
T23526 493-497 NN denotes ends
T23525 491-492 SYM denotes '
T23524 490-491 CD denotes 5
T23523 486-489 DT denotes the
T23522 483-485 IN denotes of
T23521 474-482 NN denotes location
T23520 470-473 DT denotes The
T23519 459-468 NN denotes uppercase
T23518 456-458 IN denotes in
T23517 446-455 VB denotes presented
T23516 443-445 VB denotes is
T23515 441-442 CD denotes 1
T23514 436-440 NN denotes exon
T23513 432-435 CC denotes and
T23512 422-431 VB denotes indicated
T23511 419-421 VB denotes is
T23510 417-418 -RRB- denotes )
T23509 414-417 NN denotes tis
T23508 413-414 -LRB- denotes (
T23507 408-412 NN denotes site
T23506 397-407 NN denotes initiation
T23505 383-396 NN denotes transcription
T23504 374-382 JJ denotes putative
T23503 370-373 DT denotes The
T23502 367-368 CD denotes 1
T23501 359-366 NN denotes protein
T23500 351-358 NN denotes binding
T23499 347-350 NN denotes box
T23498 340-346 NN denotes purine
T23497 332-339 NN denotes PU.1 = 
T23496 330-331 -COLON- denotes ;
T23495 322-330 NN denotes 1/POU2F1
T23494 315-321 NN denotes factor
T23493 301-314 NN denotes transcription
T23492 293-300 NN denotes octamer
T23491 285-292 NN denotes Oct1 = 
T23490 283-284 -COLON- denotes ;
T23489 276-283 NN denotes element
T23488 267-275 NN denotes response
T23487 256-266 NN denotes CRE = cAMP
T23486 254-255 -COLON- denotes ;
T23485 247-254 NN denotes protein
T23484 239-246 NN denotes binding
T23483 230-238 NN denotes enhancer
T23482 224-229 NN denotes CCAAT
T23481 215-223 NN denotes C/EBP = 
T23480 213-214 -COLON- denotes ;
T23470 144-152 NN denotes SerpinB2
T23469 137-143 JJ denotes murine
T23468 133-136 CC denotes and
T23467 127-132 JJ denotes human
T23466 123-126 DT denotes the
T23465 115-122 IN denotes between
T23464 105-114 VB denotes conserved
T23463 96-104 NN denotes elements
T23462 85-95 JJ denotes Cis-acting
T23461 75-83 NN denotes software
T23460 73-74 NNP denotes W
T23459 65-72 NNP denotes Clustal
T23458 59-64 VB denotes using
T23457 51-58 VB denotes aligned
T23456 46-50 VB denotes were
T23455 36-45 NN denotes sequences
T23454 25-35 NN denotes nucleotide
T23453 19-24 JJ denotes human
T23452 15-18 CC denotes and
T23451 9-14 NN denotes Mouse
T23450 0-7 LS denotes −563/−1
T23479 212-213 CD denotes 1
T23478 204-211 NN denotes protein
T23477 194-203 NN denotes activator
T23476 186-193 NN denotes AP-1 = 
T23475 177-184 VB denotes labeled
T23474 173-176 CC denotes and
T23473 167-172 VB denotes boxed
T23472 163-166 VB denotes are
T23471 153-162 NN denotes promoters
R16876 T23455 T23451 arg1Of sequences,Mouse
R16877 T23455 T23452 arg1Of sequences,and
R16878 T23455 T23453 arg1Of sequences,human
R16879 T23455 T23454 arg1Of sequences,nucleotide
R16880 T23455 T23456 arg1Of sequences,were
R16881 T23455 T23457 arg2Of sequences,aligned
R16882 T23457 T23456 arg2Of aligned,were
R16883 T23458 T23457 arg3Of using,aligned
R16884 T23460 T23459 arg1Of W,Clustal
R16885 T23461 T23458 arg2Of software,using
R16886 T23461 T23460 arg1Of software,W
R16887 T23463 T23462 arg1Of elements,Cis-acting
R16888 T23463 T23464 arg2Of elements,conserved
R16889 T23463 T23472 arg1Of elements,are
R16890 T23463 T23473 arg2Of elements,boxed
R16891 T23463 T23475 arg2Of elements,labeled
R16892 T23464 T23465 arg1Of conserved,between
R16893 T23467 T23468 arg1Of human,and
R16894 T23469 T23468 arg2Of murine,and
R16895 T23471 T23465 arg2Of promoters,between
R16896 T23471 T23466 arg1Of promoters,the
R16897 T23471 T23467 arg1Of promoters,human
R16898 T23471 T23469 arg1Of promoters,murine
R16899 T23471 T23470 arg1Of promoters,SerpinB2
R16900 T23473 T23474 arg1Of boxed,and
R16901 T23474 T23472 arg2Of and,are
R16902 T23475 T23474 arg2Of labeled,and
R16903 T23478 T23476 arg1Of protein,AP-1 = 
R16904 T23478 T23477 arg1Of protein,activator
R16905 T23478 T23479 arg1Of protein,1
R16906 T23478 T23480 arg1Of protein,;
R16907 T23480 T23486 arg1Of ;,;
R16908 T23485 T23480 arg2Of protein,;
R16909 T23485 T23481 arg1Of protein,C/EBP = 
R16910 T23485 T23482 arg1Of protein,CCAAT
R16911 T23485 T23483 arg1Of protein,enhancer
R16912 T23485 T23484 arg1Of protein,binding
R16913 T23486 T23496 arg1Of ;,;
R16914 T23489 T23487 arg1Of element,CRE = cAMP
R16915 T23489 T23488 arg1Of element,response
R16916 T23489 T23490 arg1Of element,;
R16917 T23490 T23486 arg2Of ;,;
R16918 T23495 T23490 arg2Of 1/POU2F1,;
R16919 T23495 T23491 arg1Of 1/POU2F1,Oct1 = 
R16920 T23495 T23492 arg1Of 1/POU2F1,octamer
R16921 T23495 T23493 arg1Of 1/POU2F1,transcription
R16922 T23495 T23494 arg1Of 1/POU2F1,factor
R16923 T23501 T23496 arg2Of protein,;
R16924 T23501 T23497 arg1Of protein,PU.1 = 
R16925 T23501 T23498 arg1Of protein,purine
R16926 T23501 T23499 arg1Of protein,box
R16927 T23501 T23500 arg1Of protein,binding
R16928 T23501 T23502 arg1Of protein,1
R16929 T23507 T23503 arg1Of site,The
R16930 T23507 T23504 arg1Of site,putative
R16931 T23507 T23505 arg1Of site,transcription
R16932 T23507 T23506 arg1Of site,initiation
R16933 T23507 T23508 arg1Of site,(
R16934 T23507 T23511 arg1Of site,is
R16935 T23507 T23512 arg2Of site,indicated
R16936 T23509 T23508 arg2Of tis,(
R16937 T23510 T23508 arg3Of ),(
R16938 T23512 T23511 arg2Of indicated,is
R16939 T23512 T23513 arg1Of indicated,and
R16940 T23514 T23515 arg1Of exon,1
R16941 T23514 T23516 arg1Of exon,is
R16942 T23514 T23517 arg2Of exon,presented
R16943 T23517 T23513 arg2Of presented,and
R16944 T23517 T23516 arg2Of presented,is
R16945 T23517 T23518 arg1Of presented,in
R16946 T23519 T23518 arg2Of uppercase,in
R16947 T23521 T23520 arg1Of location,The
R16948 T23521 T23522 arg1Of location,of
R16949 T23521 T23536 arg1Of location,are
R16950 T23521 T23538 arg2Of location,shown
R16951 T23525 T23523 arg1Of ',the
R16952 T23525 T23524 arg1Of ',5
R16953 T23526 T23522 arg2Of ends,of
R16954 T23526 T23525 arg1Of ends,'
R16955 T23526 T23527 arg1Of ends,of
R16956 T23531 T23532 arg1Of −189,and
R16957 T23533 T23532 arg2Of −87,and
R16958 T23535 T23527 arg2Of constructs,of
R16959 T23535 T23528 arg1Of constructs,the
R16960 T23535 T23529 arg1Of constructs,−539
R16961 T23535 T23530 arg1Of constructs,","
R16962 T23535 T23531 arg1Of constructs,−189
R16963 T23535 T23533 arg1Of constructs,−87
R16964 T23535 T23534 arg1Of constructs,reporter
R16965 T23538 T23536 arg2Of shown,are
R16966 T23538 T23537 arg1Of shown,also

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T23418 340-368 Protein denotes purine box binding protein 1
T23417 332-336 Protein denotes PU.1
T23416 324-330 Protein denotes POU2F1
T23415 293-323 Protein denotes octamer transcription factor 1
T23414 285-289 Protein denotes Oct1
T23413 144-152 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T23561 351-368 http://www.uniprot.org/uniprot/Q9UFW8 denotes binding protein 1
T23560 351-368 http://www.uniprot.org/uniprot/Q13541 denotes binding protein 1
T23559 351-368 http://www.uniprot.org/uniprot/Q86VP1 denotes binding protein 1
T23558 351-368 http://www.uniprot.org/uniprot/O00560 denotes binding protein 1
T23557 332-336 http://www.uniprot.org/uniprot/P17947 denotes PU.1
T23556 189-211 http://www.uniprot.org/uniprot/P10145 denotes 1 =  activator protein
T23555 189-211 http://www.uniprot.org/uniprot/P05412 denotes 1 =  activator protein
T23554 144-152 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

UBERON-AE

Id Subject Object Predicate Lexical cue
T23397 341-347 http://purl.obolibrary.org/obo/UBERON_0001088 denotes urine
T23396 138-144 http://purl.obolibrary.org/obo/UBERON_0001088 denotes urine

GO-BP

Id Subject Object Predicate Lexical cue
T23421 383-396 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T23420 301-314 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T23419 262-275 http://purl.obolibrary.org/obo/GO_0051591 denotes cAMP response

GO-MF

Id Subject Object Predicate Lexical cue
T23427 351-368 http://purl.obolibrary.org/obo/GO_0008157 denotes binding protein 1
T23426 351-366 http://purl.obolibrary.org/obo/GO_0005515 denotes binding protein
T23425 239-254 http://purl.obolibrary.org/obo/GO_0005515 denotes binding protein
T23424 351-358 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T23423 239-246 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T23422 230-246 http://purl.obolibrary.org/obo/GO_0035326 denotes enhancer binding

GO-CC

Id Subject Object Predicate Lexical cue
T23428 189-211 http://purl.obolibrary.org/obo/GO_0035976 denotes 1 =  activator protein

sentences

Id Subject Object Predicate Lexical cue
T23404 470-559 Sentence denotes The location of the 5' ends of the −539, −189 and −87 reporter constructs are also shown.
T23403 370-469 Sentence denotes The putative transcription initiation site (tis) is indicated and exon 1 is presented in uppercase.
T23402 186-369 Sentence denotes AP-1 =  activator protein 1; C/EBP =  CCAAT enhancer binding protein; CRE = cAMP response element; Oct1 =  octamer transcription factor 1/POU2F1; PU.1 =  purine box binding protein 1.
T23401 85-185 Sentence denotes Cis-acting elements conserved between the human and murine SerpinB2 promoters are boxed and labeled.
T23400 9-84 Sentence denotes Mouse and human nucleotide sequences were aligned using Clustal W software.
T23399 0-8 Sentence denotes −563/−1.
T152 0-8 Sentence denotes −563/−1.
T153 9-84 Sentence denotes Mouse and human nucleotide sequences were aligned using Clustal W software.
T154 85-185 Sentence denotes Cis-acting elements conserved between the human and murine SerpinB2 promoters are boxed and labeled.
T155 186-369 Sentence denotes AP-1 =  activator protein 1; C/EBP =  CCAAT enhancer binding protein; CRE = cAMP response element; Oct1 =  octamer transcription factor 1/POU2F1; PU.1 =  purine box binding protein 1.
T156 370-469 Sentence denotes The putative transcription initiation site (tis) is indicated and exon 1 is presented in uppercase.
T157 470-559 Sentence denotes The location of the 5' ends of the −539, −189 and −87 reporter constructs are also shown.

simple1

Id Subject Object Predicate Lexical cue
T23435 340-368 Protein denotes purine box binding protein 1
T23434 332-336 Protein denotes PU.1
T23433 324-330 Protein denotes POU2F1
T23432 293-323 Protein denotes octamer transcription factor 1
T23431 285-289 Protein denotes Oct1
T23430 144-152 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T23552 340-368 Protein denotes purine box binding protein 1
T23551 332-336 Protein denotes PU.1
T23550 324-330 Protein denotes POU2F1
T23549 293-323 Protein denotes octamer transcription factor 1
T23548 285-289 Protein denotes Oct1
T23547 144-152 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T23579 285-289 Protein denotes Oct1
T23578 144-152 Protein denotes SerpinB2
T23583 340-368 Protein denotes purine box binding protein 1
T23582 332-336 Protein denotes PU.1
T23581 324-330 Protein denotes POU2F1
T23580 293-323 Protein denotes octamer transcription factor 1

DLUT931

Id Subject Object Predicate Lexical cue
T23569 239-246 Binding denotes binding
T23568 340-368 Protein denotes purine box binding protein 1
T23567 332-336 Protein denotes PU.1
T23566 324-330 Protein denotes POU2F1
T23565 293-323 Protein denotes octamer transcription factor 1
T23564 285-289 Protein denotes Oct1
T23563 144-152 Protein denotes SerpinB2
R16967 T23565 T23569 themeOf octamer transcription factor 1,binding
R16968 T23565 T23569 themeOf octamer transcription factor 1,binding
R16969 T23566 T23569 themeOf POU2F1,binding
R16970 T23566 T23569 themeOf POU2F1,binding
R16971 T23568 T23569 themeOf purine box binding protein 1,binding
R16972 T23568 T23569 themeOf purine box binding protein 1,binding

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T23629 332-368 Protein denotes PU.1 =  purine box binding protein 1
T23628 186-211 Entity denotes AP-1 =  activator protein
T23627 293-330 Protein denotes octamer transcription factor 1/POU2F1
T23626 293-330 Protein denotes octamer transcription factor 1/POU2F1
T23625 370-418 Entity denotes The putative transcription initiation site (tis)
T23623 25-35 Entity denotes nucleotide
T23622 332-337 Protein denotes PU.1 
T23621 262-266 Protein denotes cAMP
T23620 137-162 Entity denotes murine SerpinB2 promoters
T23619 186-211 Protein denotes AP-1 =  activator protein
T23618 324-330 Protein denotes POU2F1
T23617 186-191 Protein denotes AP-1 
T23616 256-330 Protein denotes CRE = cAMP response element; Oct1 =  octamer transcription factor 1/POU2F1
T23615 436-442 Entity denotes exon 1
T23614 85-88 Protein denotes Cis
T23613 144-152 Protein denotes SerpinB2
T23612 256-260 Protein denotes CRE 
T23611 215-221 Protein denotes C/EBP 
T23610 65-83 Entity denotes Clustal W software
R16982 T23620 T23613 partOf murine SerpinB2 promoters,SerpinB2

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T23595 191-192 Negative_regulation denotes =
T23594 332-368 Protein denotes PU.1 =  purine box binding protein 1
T23593 324-330 Protein denotes POU2F1
T23592 285-323 Protein denotes Oct1 =  octamer transcription factor 1
T23591 224-254 Protein denotes CCAAT enhancer binding protein
T23590 215-220 Protein denotes C/EBP
T23589 194-213 Protein denotes activator protein 1
T23588 186-190 Protein denotes AP-1
T23587 137-162 Protein denotes murine SerpinB2 promoters
R16975 T23588 T23595 causeOf AP-1,=
R16976 T23589 T23595 themeOf activator protein 1,=

testone

Id Subject Object Predicate Lexical cue
T23381 340-368 Protein denotes purine box binding protein 1
T23380 332-336 Protein denotes PU.1
T23379 324-330 Protein denotes POU2F1
T23378 293-323 Protein denotes octamer transcription factor 1
T23377 285-289 Protein denotes Oct1
T23376 144-152 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T23395 340-368 Protein denotes purine box binding protein 1
T23394 332-339 Protein denotes PU.1 = 
T23393 324-330 Protein denotes POU2F1
T23392 293-323 Protein denotes octamer transcription factor 1
T23391 285-292 Protein denotes Oct1 = 
T23390 144-152 Protein denotes SerpinB2
T23388 340-368 Protein denotes purine box binding protein 1
T23387 332-336 Protein denotes PU.1
T23386 324-330 Protein denotes POU2F1
T23385 293-323 Protein denotes octamer transcription factor 1
T23384 285-289 Protein denotes Oct1
T23383 144-152 Protein denotes SerpinB2
R16859 T23393 T23392 equivalentTo POU2F1,octamer transcription factor 1