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PMC:3589482 / 23031-23287 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T11234 255-256 . denotes .
T11233 252-255 CD denotes 177
T11232 251-252 CD denotes −
T11231 250-251 NN denotes /
T11230 247-250 CD denotes 172
T11229 246-247 CD denotes −
T11228 243-245 IN denotes at
T11227 235-242 JJ denotes present
T11226 232-234 VBZ denotes is
T11225 230-231 -RRB- denotes )
T11224 227-230 NNP denotes CRE
T11223 226-227 -LRB- denotes (
T11222 218-225 NN denotes element
T11221 209-217 NN denotes response
T11220 205-208 NNP denotes AMP
T11219 198-204 JJ denotes cyclic
T11218 189-197 JJ denotes putative
T11217 187-188 DT denotes a
T11216 183-186 CC denotes and
T11215 181-182 , denotes ,
T11214 178-181 CD denotes 106
T11213 177-178 NN denotes −
T11212 176-177 CD denotes /
T11211 173-176 CD denotes 100
T11210 172-173 CD denotes −
T11209 168-171 CC denotes and
T11208 165-167 CD denotes 94
T11207 164-165 NN denotes −
T11206 163-164 CD denotes /
T11205 161-163 CD denotes 88
T11204 160-161 VBP denotes −
T11203 148-159 NNS denotes nucleotides
T11202 145-147 IN denotes at
T11201 139-144 VBN denotes found
T11200 135-138 VBP denotes are
T11199 129-134 NNS denotes sites
T11198 121-128 JJ denotes binding
T11197 119-120 -RRB- denotes )
T11196 115-119 NN denotes AP-1
T11195 114-115 -LRB- denotes (
T11194 112-113 CD denotes 1
T11193 104-111 NN denotes protein
T11192 94-103 NN denotes activator
T11191 84-93 JJ denotes potential
T11190 80-83 CD denotes two
T11189 78-79 , denotes ,
T11188 75-78 CD denotes 203
T11187 74-75 NN denotes −
T11186 73-74 NN denotes /
T11185 70-73 CD denotes 192
T11184 69-70 CD denotes −
T11183 66-68 IN denotes at
T11182 58-65 JJ denotes present
T11181 55-57 VBZ denotes is
T11180 50-54 NN denotes site
T11179 48-49 -RRB- denotes )
T11178 43-48 NNP denotes C/EBP
T11177 42-43 -LRB- denotes (
T11176 34-41 NN denotes protein
T11175 26-33 JJ denotes binding
T11174 17-25 NN denotes enhancer
T11173 11-16 NNP denotes CCAAT
T11172 2-10 JJ denotes putative
T11171 0-1 DT denotes A
R8217 T11171 T11176 det A,protein
R8218 T11172 T11174 amod putative,enhancer
R8219 T11173 T11174 compound CCAAT,enhancer
R8220 T11174 T11176 nmod enhancer,protein
R8221 T11175 T11176 amod binding,protein
R8222 T11176 T11181 nsubj protein,is
R8223 T11177 T11176 punct (,protein
R8224 T11178 T11180 compound C/EBP,site
R8225 T11179 T11180 punct ),site
R8226 T11180 T11176 appos site,protein
R8227 T11181 T11181 ROOT is,is
R8228 T11182 T11181 acomp present,is
R8229 T11183 T11181 prep at,is
R8230 T11184 T11201 nsubjpass −,found
R8231 T11185 T11187 nummod 192,−
R8232 T11186 T11187 compound /,−
R8233 T11187 T11201 npadvmod −,found
R8234 T11188 T11187 nummod 203,−
R8235 T11189 T11201 punct ",",found
R8236 T11190 T11199 nummod two,sites
R8237 T11191 T11193 amod potential,protein
R8238 T11192 T11193 compound activator,protein
R8239 T11193 T11199 nmod protein,sites
R8240 T11194 T11193 nummod 1,protein
R8241 T11195 T11196 punct (,AP-1
R8242 T11196 T11193 appos AP-1,protein
R8243 T11197 T11193 punct ),protein
R8244 T11198 T11199 amod binding,sites
R8245 T11199 T11201 nsubjpass sites,found
R8246 T11200 T11201 auxpass are,found
R8247 T11201 T11181 advcl found,is
R8248 T11202 T11201 prep at,found
R8249 T11203 T11202 pobj nucleotides,at
R8250 T11204 T11207 meta −,−
R8251 T11205 T11206 compound 88,/
R8252 T11206 T11207 nummod /,−
R8253 T11207 T11226 nsubj −,is
R8254 T11208 T11207 nummod 94,−
R8255 T11209 T11207 cc and,−
R8256 T11210 T11213 nummod −,−
R8257 T11211 T11213 nummod 100,−
R8258 T11212 T11213 nummod /,−
R8259 T11213 T11207 conj −,−
R8260 T11214 T11213 nummod 106,−
R8261 T11215 T11213 punct ",",−
R8262 T11216 T11213 cc and,−
R8263 T11217 T11222 det a,element
R8264 T11218 T11222 amod putative,element
R8265 T11219 T11222 amod cyclic,element
R8266 T11220 T11222 compound AMP,element
R8267 T11221 T11222 compound response,element
R8268 T11222 T11213 conj element,−
R8269 T11223 T11224 punct (,CRE
R8270 T11224 T11222 appos CRE,element
R8271 T11225 T11222 punct ),element
R8272 T11226 T11181 conj is,is
R8273 T11227 T11226 acomp present,is
R8274 T11228 T11227 prep at,present
R8275 T11229 T11232 nummod −,−
R8276 T11230 T11232 nummod 172,−
R8277 T11231 T11232 punct /,−
R8278 T11232 T11228 pobj −,at
R8279 T11233 T11226 npadvmod 177,is
R8280 T11234 T11226 punct .,is

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T10695 246-255 CD denotes −172/−177
T10694 243-245 IN denotes at
T10693 235-242 JJ denotes present
T10692 232-234 VB denotes is
T10691 230-231 -RRB- denotes )
T10690 227-230 NN denotes CRE
T10689 226-227 -LRB- denotes (
T10688 218-225 NN denotes element
T10687 209-217 NN denotes response
T10686 205-208 NN denotes AMP
T10685 198-204 JJ denotes cyclic
T10684 189-197 JJ denotes putative
T10683 187-188 DT denotes a
T10682 183-186 CC denotes and
T10681 181-182 -COMMA- denotes ,
T10680 172-181 CD denotes −100/−106
T10679 168-171 CC denotes and
T10678 160-167 CD denotes −88/−94
T10677 148-159 NN denotes nucleotides
T10676 145-147 IN denotes at
T10675 139-144 VB denotes found
T10674 135-138 VB denotes are
T10673 129-134 NN denotes sites
T10672 121-128 NN denotes binding
T10671 119-120 -RRB- denotes )
T10670 115-119 NN denotes AP-1
T10669 114-115 -LRB- denotes (
T10668 112-113 CD denotes 1
T10667 104-111 NN denotes protein
T10666 94-103 NN denotes activator
T10665 84-93 JJ denotes potential
T10664 80-83 CD denotes two
T10663 78-79 -COMMA- denotes ,
T10662 69-78 CD denotes −192/−203
T10661 66-68 IN denotes at
T10660 58-65 JJ denotes present
T10659 55-57 VB denotes is
T10658 50-54 NN denotes site
T10657 48-49 -RRB- denotes )
T10656 43-48 NN denotes C/EBP
T10655 42-43 -LRB- denotes (
T10654 34-41 NN denotes protein
T10653 26-33 NN denotes binding
T10652 17-25 NN denotes enhancer
T10651 11-16 NN denotes CCAAT
T10650 2-10 JJ denotes putative
T10649 0-1 DT denotes A
R7818 T10656 T10655 arg2Of C/EBP,(
R7819 T10657 T10655 arg3Of ),(
R7820 T10658 T10649 arg1Of site,A
R7821 T10658 T10650 arg1Of site,putative
R7822 T10658 T10651 arg1Of site,CCAAT
R7823 T10658 T10652 arg1Of site,enhancer
R7824 T10658 T10653 arg1Of site,binding
R7825 T10658 T10654 arg1Of site,protein
R7826 T10658 T10655 arg1Of site,(
R7827 T10658 T10659 arg1Of site,is
R7828 T10658 T10660 arg1Of site,present
R7829 T10660 T10659 arg2Of present,is
R7830 T10660 T10661 arg1Of present,at
R7831 T10662 T10661 arg2Of −192/−203,at
R7832 T10670 T10669 arg2Of AP-1,(
R7833 T10671 T10669 arg3Of ),(
R7834 T10673 T10664 arg1Of sites,two
R7835 T10673 T10665 arg1Of sites,potential
R7836 T10673 T10666 arg1Of sites,activator
R7837 T10673 T10667 arg1Of sites,protein
R7838 T10673 T10668 arg1Of sites,1
R7839 T10673 T10669 arg1Of sites,(
R7840 T10673 T10672 arg1Of sites,binding
R7841 T10673 T10674 arg1Of sites,are
R7842 T10673 T10675 arg2Of sites,found
R7843 T10675 T10674 arg2Of found,are
R7844 T10675 T10676 arg1Of found,at
R7845 T10675 T10682 arg1Of found,and
R7846 T10678 T10679 arg1Of −88/−94,and
R7847 T10679 T10676 arg2Of and,at
R7848 T10679 T10677 arg1Of and,nucleotides
R7849 T10680 T10679 arg2Of −100/−106,and
R7850 T10682 T10659 arg3Of and,is
R7851 T10682 T10663 arg1Of and,","
R7852 T10682 T10681 arg1Of and,","
R7853 T10688 T10683 arg1Of element,a
R7854 T10688 T10684 arg1Of element,putative
R7855 T10688 T10685 arg1Of element,cyclic
R7856 T10688 T10686 arg1Of element,AMP
R7857 T10688 T10687 arg1Of element,response
R7858 T10688 T10689 arg1Of element,(
R7859 T10688 T10692 arg1Of element,is
R7860 T10688 T10693 arg1Of element,present
R7861 T10690 T10689 arg2Of CRE,(
R7862 T10691 T10689 arg3Of ),(
R7863 T10692 T10682 arg2Of is,and
R7864 T10693 T10692 arg2Of present,is
R7865 T10693 T10694 arg1Of present,at
R7866 T10695 T10694 arg2Of −172/−177,at

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T10847 112-117 http://www.uniprot.org/uniprot/P05412 denotes 1 (AP

GO-BP

Id Subject Object Predicate Lexical cue
T10437 198-217 http://purl.obolibrary.org/obo/GO_0051591 denotes cyclic AMP response
T10436 198-217 http://purl.obolibrary.org/obo/GO_0071320 denotes cyclic AMP response

GO-MF

Id Subject Object Predicate Lexical cue
T10452 26-44 http://purl.obolibrary.org/obo/GO_0008022 denotes binding protein (C
T10451 26-41 http://purl.obolibrary.org/obo/GO_0005515 denotes binding protein
T10450 17-33 http://purl.obolibrary.org/obo/GO_0035326 denotes enhancer binding
T10447 121-128 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T10446 26-33 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T10396 0-256 Sentence denotes A putative CCAAT enhancer binding protein (C/EBP) site is present at −192/−203, two potential activator protein 1 (AP-1) binding sites are found at nucleotides −88/−94 and −100/−106, and a putative cyclic AMP response element (CRE) is present at −172/−177.
T147 0-256 Sentence denotes A putative CCAAT enhancer binding protein (C/EBP) site is present at −192/−203, two potential activator protein 1 (AP-1) binding sites are found at nucleotides −88/−94 and −100/−106, and a putative cyclic AMP response element (CRE) is present at −172/−177.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T10970 34-49 Protein denotes protein (C/EBP)
T10969 43-48 Protein denotes C/EBP
T10966 227-230 Protein denotes CRE
T10956 205-208 Entity denotes AMP
T10955 80-120 Protein denotes two potential activator protein 1 (AP-1)
T10937 115-119 Protein denotes AP-1

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T10907 84-113 Protein denotes potential activator protein 1
T10906 43-48 Protein denotes C/EBP
T10905 11-41 Protein denotes CCAAT enhancer binding protein