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PMC:3589482 / 23-230 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T766 2-7 NNP denotes C/EBP
T767 7-8 : denotes -
T768 8-9 NN denotes β
T769 10-18 NNP denotes Mediates
T770 19-31 NNP denotes Constitutive
T771 32-35 CC denotes and
T772 36-49 JJ denotes LPS-Inducible
T773 50-63 NN denotes Transcription
T774 64-66 IN denotes of
T775 67-73 NNP denotes Murine
T776 74-82 NNP denotes SerpinB2
T788 195-201 RB denotes highly
T787 192-194 VBZ denotes is
T786 190-191 -RRB- denotes )
T785 185-190 NN denotes PAI-2
T784 184-185 -LRB- denotes (
T783 182-183 CD denotes 2
T782 177-181 NN denotes type
T781 167-176 NN denotes inhibitor
T780 157-166 NN denotes activator
T779 145-156 NN denotes plasminogen
T778 142-144 CC denotes or
T777 133-141 NNP denotes SerpinB2
R353 T766 T768 compound C/EBP,β
R354 T767 T768 punct -,β
R355 T768 T770 compound β,Constitutive
R356 T769 T770 compound Mediates,Constitutive
R357 T770 T773 nmod Constitutive,Transcription
R358 T771 T770 cc and,Constitutive
R359 T772 T770 conj LPS-Inducible,Constitutive
R361 T774 T773 prep of,Transcription
R362 T775 T777 compound Murine,SerpinB2
R363 T776 T777 compound SerpinB2,SerpinB2
R364 T777 T774 pobj SerpinB2,of
R365 T778 T777 cc or,SerpinB2
R366 T779 T773 conj plasminogen,Transcription
R367 T780 T781 amod activator,inhibitor
R368 T781 T782 compound inhibitor,type
R369 T782 T773 appos type,Transcription
R370 T783 T782 nummod 2,type
R371 T784 T782 punct (,type
R372 T785 T782 appos PAI-2,type
R373 T786 T782 punct ),type

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T239 67-73 NNP denotes Murine
T240 74-82 NN denotes SerpinB2
T252 195-201 RB denotes highly
T251 192-194 VB denotes is
T250 190-191 -RRB- denotes )
T249 185-190 NN denotes PAI-2
T248 184-185 -LRB- denotes (
T247 182-183 CD denotes 2
T246 177-181 NN denotes type
T245 167-176 NN denotes inhibitor
T244 157-166 NN denotes activator
T243 145-156 NN denotes plasminogen
T242 142-144 CC denotes or
T241 133-141 NN denotes SerpinB2
T232 2-9 NNP denotes C/EBP-β
T233 10-18 NNP denotes Mediates
T234 19-31 NNP denotes Constitutive
T235 32-35 CC denotes and
T236 36-49 JJ denotes LPS-Inducible
T237 50-63 NN denotes Transcription
T238 64-66 IN denotes of
R47 T240 T238 arg2Of SerpinB2,of
R48 T240 T239 arg1Of SerpinB2,Murine
R49 T241 T242 arg1Of SerpinB2,or
R50 T243 T242 arg2Of plasminogen,or
R51 T246 T241 arg1Of type,SerpinB2
R52 T246 T243 arg1Of type,plasminogen
R53 T246 T244 arg1Of type,activator
R54 T246 T245 arg1Of type,inhibitor
R55 T246 T247 arg1Of type,2
R56 T246 T248 arg1Of type,(
R57 T246 T251 arg1Of type,is
R61 T249 T248 arg2Of PAI-2,(
R62 T250 T248 arg3Of ),(
R668 T234 T232 arg1Of Constitutive,C/EBP-β
R669 T234 T233 arg1Of Constitutive,Mediates
R670 T234 T235 arg1Of Constitutive,and
R671 T236 T235 arg2Of LPS-Inducible,and
R673 T237 T234 arg1Of Transcription,Constitutive
R674 T237 T236 arg1Of Transcription,LPS-Inducible
R675 T237 T238 arg1Of Transcription,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T157 2-9 Protein denotes C/EBP-β
T158 74-82 Protein denotes SerpinB2
T159 133-141 Protein denotes SerpinB2
T160 145-183 Protein denotes plasminogen activator inhibitor type 2
T161 185-190 Protein denotes PAI-2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T530 133-141 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T537 182-188 http://www.uniprot.org/uniprot/P05120 denotes 2 (PAI
T524 2-9 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T529 74-82 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T177 50-63 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T178 145-166 http://purl.obolibrary.org/obo/GO_0031639 denotes plasminogen activator

sentences

Id Subject Object Predicate Lexical cue
T2 83-122 Sentence denotes C/EBP-β Mediates SerpinB2 Transcription
T3 124-132 Sentence denotes Abstract

simple1

Id Subject Object Predicate Lexical cue
T210 2-9 Protein denotes C/EBP-β
T212 133-141 Protein denotes SerpinB2
T213 145-183 Protein denotes plasminogen activator inhibitor type 2
T214 185-190 Protein denotes PAI-2
T211 74-82 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T510 36-49 Positive_regulation denotes LPS-Inducible
T511 50-63 Transcription denotes Transcription
T491 2-9 Protein denotes C/EBP-β
T492 74-82 Protein denotes SerpinB2
T493 133-141 Protein denotes SerpinB2
T494 145-183 Protein denotes plasminogen activator inhibitor type 2
T495 185-190 Protein denotes PAI-2
R307 T511 T510 themeOf Transcription,LPS-Inducible
R676 T492 T511 themeOf SerpinB2,Transcription

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T601 2-9 Protein denotes C/EBP-β
T602 74-82 Protein denotes SerpinB2
T620 50-63 Transcription denotes Transcription
T621 10-18 Positive_regulation denotes Mediates
T603 133-141 Protein denotes SerpinB2
T604 145-183 Protein denotes plasminogen activator inhibitor type 2
T605 185-190 Protein denotes PAI-2
R694 T601 T621 causeOf C/EBP-β,Mediates
R715 T602 T620 themeOf SerpinB2,Transcription
R732 T620 T621 themeOf Transcription,Mediates

DLUT931

Id Subject Object Predicate Lexical cue
T567 2-9 Protein denotes C/EBP-β
T568 74-82 Protein denotes SerpinB2
T586 50-63 Transcription denotes Transcription
T587 10-18 Positive_regulation denotes Mediates
T588 36-49 Positive_regulation denotes LPS-Inducible
T569 133-141 Protein denotes SerpinB2
T570 145-183 Protein denotes plasminogen activator inhibitor type 2
T571 185-190 Protein denotes PAI-2
R681 T567 T587 causeOf C/EBP-β,Mediates
R682 T568 T586 themeOf SerpinB2,Transcription
R691 T586 T587 themeOf Transcription,Mediates
R692 T586 T588 themeOf Transcription,LPS-Inducible

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T749 64-82 Protein denotes of Murine SerpinB2
T758 36-82 Transcription denotes LPS-Inducible Transcription of Murine SerpinB2
T739 185-190 Protein denotes PAI-2
T740 133-191 Protein denotes SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2)
T744 145-191 Protein denotes plasminogen activator inhibitor type 2 (PAI-2)
R349 T749 T758 themeOf of Murine SerpinB2,LPS-Inducible Transcription of Murine SerpinB2

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T640 185-190 Protein denotes PAI-2
T636 67-82 Protein denotes Murine SerpinB2
T637 50-63 Transcription denotes Transcription
T638 10-18 Positive_regulation denotes Mediates
T639 145-183 Protein denotes plasminogen activator inhibitor type 2
R704 T636 T637 themeOf Murine SerpinB2,Transcription
R705 T637 T638 themeOf Transcription,Mediates

testone

Id Subject Object Predicate Lexical cue
T20 2-9 Protein denotes C/EBP-β
T21 74-82 Protein denotes SerpinB2
T24 185-190 Protein denotes PAI-2
T23 145-183 Protein denotes plasminogen activator inhibitor type 2
T22 133-141 Protein denotes SerpinB2
R1 T24 T23 equivalentTo PAI-2,plasminogen activator inhibitor type 2

test3

Id Subject Object Predicate Lexical cue
T49 2-9 Protein denotes C/EBP-β
T50 74-82 Protein denotes SerpinB2
T68 2-9 Protein denotes C/EBP-β
T69 74-82 Protein denotes SerpinB2
T72 185-190 Protein denotes PAI-2
T71 145-183 Protein denotes plasminogen activator inhibitor type 2
T70 133-141 Protein denotes SerpinB2
T53 185-190 Protein denotes PAI-2
T52 145-183 Protein denotes plasminogen activator inhibitor type 2
T51 133-141 Protein denotes SerpinB2
R16 T72 T71 equivalentTo PAI-2,plasminogen activator inhibitor type 2