PMC:3589482 / 23-230
Annnotations
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T766 | 2-7 | NNP | denotes | C/EBP |
T767 | 7-8 | : | denotes | - |
T768 | 8-9 | NN | denotes | β |
T769 | 10-18 | NNP | denotes | Mediates |
T770 | 19-31 | NNP | denotes | Constitutive |
T771 | 32-35 | CC | denotes | and |
T772 | 36-49 | JJ | denotes | LPS-Inducible |
T773 | 50-63 | NN | denotes | Transcription |
T774 | 64-66 | IN | denotes | of |
T775 | 67-73 | NNP | denotes | Murine |
T776 | 74-82 | NNP | denotes | SerpinB2 |
T788 | 195-201 | RB | denotes | highly |
T787 | 192-194 | VBZ | denotes | is |
T786 | 190-191 | -RRB- | denotes | ) |
T785 | 185-190 | NN | denotes | PAI-2 |
T784 | 184-185 | -LRB- | denotes | ( |
T783 | 182-183 | CD | denotes | 2 |
T782 | 177-181 | NN | denotes | type |
T781 | 167-176 | NN | denotes | inhibitor |
T780 | 157-166 | NN | denotes | activator |
T779 | 145-156 | NN | denotes | plasminogen |
T778 | 142-144 | CC | denotes | or |
T777 | 133-141 | NNP | denotes | SerpinB2 |
R353 | T766 | T768 | compound | C/EBP,β |
R354 | T767 | T768 | punct | -,β |
R355 | T768 | T770 | compound | β,Constitutive |
R356 | T769 | T770 | compound | Mediates,Constitutive |
R357 | T770 | T773 | nmod | Constitutive,Transcription |
R358 | T771 | T770 | cc | and,Constitutive |
R359 | T772 | T770 | conj | LPS-Inducible,Constitutive |
R361 | T774 | T773 | prep | of,Transcription |
R362 | T775 | T777 | compound | Murine,SerpinB2 |
R363 | T776 | T777 | compound | SerpinB2,SerpinB2 |
R364 | T777 | T774 | pobj | SerpinB2,of |
R365 | T778 | T777 | cc | or,SerpinB2 |
R366 | T779 | T773 | conj | plasminogen,Transcription |
R367 | T780 | T781 | amod | activator,inhibitor |
R368 | T781 | T782 | compound | inhibitor,type |
R369 | T782 | T773 | appos | type,Transcription |
R370 | T783 | T782 | nummod | 2,type |
R371 | T784 | T782 | punct | (,type |
R372 | T785 | T782 | appos | PAI-2,type |
R373 | T786 | T782 | punct | ),type |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T239 | 67-73 | NNP | denotes | Murine |
T240 | 74-82 | NN | denotes | SerpinB2 |
T252 | 195-201 | RB | denotes | highly |
T251 | 192-194 | VB | denotes | is |
T250 | 190-191 | -RRB- | denotes | ) |
T249 | 185-190 | NN | denotes | PAI-2 |
T248 | 184-185 | -LRB- | denotes | ( |
T247 | 182-183 | CD | denotes | 2 |
T246 | 177-181 | NN | denotes | type |
T245 | 167-176 | NN | denotes | inhibitor |
T244 | 157-166 | NN | denotes | activator |
T243 | 145-156 | NN | denotes | plasminogen |
T242 | 142-144 | CC | denotes | or |
T241 | 133-141 | NN | denotes | SerpinB2 |
T232 | 2-9 | NNP | denotes | C/EBP-β |
T233 | 10-18 | NNP | denotes | Mediates |
T234 | 19-31 | NNP | denotes | Constitutive |
T235 | 32-35 | CC | denotes | and |
T236 | 36-49 | JJ | denotes | LPS-Inducible |
T237 | 50-63 | NN | denotes | Transcription |
T238 | 64-66 | IN | denotes | of |
R47 | T240 | T238 | arg2Of | SerpinB2,of |
R48 | T240 | T239 | arg1Of | SerpinB2,Murine |
R49 | T241 | T242 | arg1Of | SerpinB2,or |
R50 | T243 | T242 | arg2Of | plasminogen,or |
R51 | T246 | T241 | arg1Of | type,SerpinB2 |
R52 | T246 | T243 | arg1Of | type,plasminogen |
R53 | T246 | T244 | arg1Of | type,activator |
R54 | T246 | T245 | arg1Of | type,inhibitor |
R55 | T246 | T247 | arg1Of | type,2 |
R56 | T246 | T248 | arg1Of | type,( |
R57 | T246 | T251 | arg1Of | type,is |
R61 | T249 | T248 | arg2Of | PAI-2,( |
R62 | T250 | T248 | arg3Of | ),( |
R668 | T234 | T232 | arg1Of | Constitutive,C/EBP-β |
R669 | T234 | T233 | arg1Of | Constitutive,Mediates |
R670 | T234 | T235 | arg1Of | Constitutive,and |
R671 | T236 | T235 | arg2Of | LPS-Inducible,and |
R673 | T237 | T234 | arg1Of | Transcription,Constitutive |
R674 | T237 | T236 | arg1Of | Transcription,LPS-Inducible |
R675 | T237 | T238 | arg1Of | Transcription,of |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T157 | 2-9 | Protein | denotes | C/EBP-β |
T158 | 74-82 | Protein | denotes | SerpinB2 |
T159 | 133-141 | Protein | denotes | SerpinB2 |
T160 | 145-183 | Protein | denotes | plasminogen activator inhibitor type 2 |
T161 | 185-190 | Protein | denotes | PAI-2 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T530 | 133-141 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T537 | 182-188 | http://www.uniprot.org/uniprot/P05120 | denotes | 2 (PAI |
T524 | 2-9 | http://www.uniprot.org/uniprot/P28033 | denotes | C/EBP-β |
T529 | 74-82 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T177 | 50-63 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | Transcription |
T178 | 145-166 | http://purl.obolibrary.org/obo/GO_0031639 | denotes | plasminogen activator |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2 | 83-122 | Sentence | denotes | C/EBP-β Mediates SerpinB2 Transcription |
T3 | 124-132 | Sentence | denotes | Abstract |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T210 | 2-9 | Protein | denotes | C/EBP-β |
T212 | 133-141 | Protein | denotes | SerpinB2 |
T213 | 145-183 | Protein | denotes | plasminogen activator inhibitor type 2 |
T214 | 185-190 | Protein | denotes | PAI-2 |
T211 | 74-82 | Protein | denotes | SerpinB2 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T510 | 36-49 | Positive_regulation | denotes | LPS-Inducible |
T511 | 50-63 | Transcription | denotes | Transcription |
T491 | 2-9 | Protein | denotes | C/EBP-β |
T492 | 74-82 | Protein | denotes | SerpinB2 |
T493 | 133-141 | Protein | denotes | SerpinB2 |
T494 | 145-183 | Protein | denotes | plasminogen activator inhibitor type 2 |
T495 | 185-190 | Protein | denotes | PAI-2 |
R307 | T511 | T510 | themeOf | Transcription,LPS-Inducible |
R676 | T492 | T511 | themeOf | SerpinB2,Transcription |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T601 | 2-9 | Protein | denotes | C/EBP-β |
T602 | 74-82 | Protein | denotes | SerpinB2 |
T620 | 50-63 | Transcription | denotes | Transcription |
T621 | 10-18 | Positive_regulation | denotes | Mediates |
T603 | 133-141 | Protein | denotes | SerpinB2 |
T604 | 145-183 | Protein | denotes | plasminogen activator inhibitor type 2 |
T605 | 185-190 | Protein | denotes | PAI-2 |
R694 | T601 | T621 | causeOf | C/EBP-β,Mediates |
R715 | T602 | T620 | themeOf | SerpinB2,Transcription |
R732 | T620 | T621 | themeOf | Transcription,Mediates |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T567 | 2-9 | Protein | denotes | C/EBP-β |
T568 | 74-82 | Protein | denotes | SerpinB2 |
T586 | 50-63 | Transcription | denotes | Transcription |
T587 | 10-18 | Positive_regulation | denotes | Mediates |
T588 | 36-49 | Positive_regulation | denotes | LPS-Inducible |
T569 | 133-141 | Protein | denotes | SerpinB2 |
T570 | 145-183 | Protein | denotes | plasminogen activator inhibitor type 2 |
T571 | 185-190 | Protein | denotes | PAI-2 |
R681 | T567 | T587 | causeOf | C/EBP-β,Mediates |
R682 | T568 | T586 | themeOf | SerpinB2,Transcription |
R691 | T586 | T587 | themeOf | Transcription,Mediates |
R692 | T586 | T588 | themeOf | Transcription,LPS-Inducible |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T749 | 64-82 | Protein | denotes | of Murine SerpinB2 |
T758 | 36-82 | Transcription | denotes | LPS-Inducible Transcription of Murine SerpinB2 |
T739 | 185-190 | Protein | denotes | PAI-2 |
T740 | 133-191 | Protein | denotes | SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) |
T744 | 145-191 | Protein | denotes | plasminogen activator inhibitor type 2 (PAI-2) |
R349 | T749 | T758 | themeOf | of Murine SerpinB2,LPS-Inducible Transcription of Murine SerpinB2 |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T640 | 185-190 | Protein | denotes | PAI-2 |
T636 | 67-82 | Protein | denotes | Murine SerpinB2 |
T637 | 50-63 | Transcription | denotes | Transcription |
T638 | 10-18 | Positive_regulation | denotes | Mediates |
T639 | 145-183 | Protein | denotes | plasminogen activator inhibitor type 2 |
R704 | T636 | T637 | themeOf | Murine SerpinB2,Transcription |
R705 | T637 | T638 | themeOf | Transcription,Mediates |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20 | 2-9 | Protein | denotes | C/EBP-β |
T21 | 74-82 | Protein | denotes | SerpinB2 |
T24 | 185-190 | Protein | denotes | PAI-2 |
T23 | 145-183 | Protein | denotes | plasminogen activator inhibitor type 2 |
T22 | 133-141 | Protein | denotes | SerpinB2 |
R1 | T24 | T23 | equivalentTo | PAI-2,plasminogen activator inhibitor type 2 |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T49 | 2-9 | Protein | denotes | C/EBP-β |
T50 | 74-82 | Protein | denotes | SerpinB2 |
T68 | 2-9 | Protein | denotes | C/EBP-β |
T69 | 74-82 | Protein | denotes | SerpinB2 |
T72 | 185-190 | Protein | denotes | PAI-2 |
T71 | 145-183 | Protein | denotes | plasminogen activator inhibitor type 2 |
T70 | 133-141 | Protein | denotes | SerpinB2 |
T53 | 185-190 | Protein | denotes | PAI-2 |
T52 | 145-183 | Protein | denotes | plasminogen activator inhibitor type 2 |
T51 | 133-141 | Protein | denotes | SerpinB2 |
R16 | T72 | T71 | equivalentTo | PAI-2,plasminogen activator inhibitor type 2 |