> top > docs > PMC:3589482 > spans > 214-488 > annotations

PMC:3589482 / 214-488 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T829 261-271 NN denotes expression
T828 252-260 NNP denotes SerpinB2
T827 245-251 VB denotes induce
T826 241-244 MD denotes can
T825 239-240 , denotes ,
T824 230-239 NN denotes endotoxin
T823 220-229 JJ denotes bacterial
T822 213-219 JJ denotes potent
T821 211-212 DT denotes a
T820 209-210 , denotes ,
T819 208-209 -RRB- denotes )
T818 205-208 NNP denotes LPS
T817 204-205 -LRB- denotes (
T816 185-203 NNP denotes Lipopolysaccharide
T815 183-184 . denotes .
T814 173-183 NNS denotes activators
T813 161-172 NN denotes plasminogen
T812 158-160 IN denotes of
T811 147-157 NN denotes inhibition
T810 143-146 CC denotes and
T809 141-142 , denotes ,
T808 133-141 NN denotes survival
T807 122-132 NN denotes macrophage
T806 120-121 , denotes ,
T805 112-120 NN denotes immunity
T804 105-111 NN denotes innate
T803 102-104 IN denotes of
T802 91-101 NN denotes modulation
T801 87-90 DT denotes the
T800 84-86 TO denotes to
T799 77-83 VBN denotes linked
T798 74-76 VBZ denotes is
T797 70-73 CC denotes and
T796 62-69 NNS denotes stimuli
T795 49-61 JJ denotes inflammatory
T794 46-48 TO denotes to
T793 37-45 NN denotes response
T792 34-36 IN denotes in
T791 22-33 NNS denotes macrophages
T790 19-21 IN denotes in
T789 11-18 VBN denotes induced
T788 4-10 RB denotes highly
T787 1-3 VBZ denotes is
R374 T787 T789 auxpass is,induced
R375 T788 T789 advmod highly,induced
R376 T789 T789 ROOT induced,induced
R377 T790 T789 prep in,induced
R378 T791 T790 pobj macrophages,in
R379 T792 T789 prep in,induced
R380 T793 T792 pobj response,in
R381 T794 T793 prep to,response
R382 T795 T796 amod inflammatory,stimuli
R383 T796 T794 pobj stimuli,to
R384 T797 T789 cc and,induced
R385 T798 T799 auxpass is,linked
R386 T799 T789 conj linked,induced
R387 T800 T799 prep to,linked
R388 T801 T802 det the,modulation
R389 T802 T800 pobj modulation,to
R390 T803 T802 prep of,modulation
R391 T804 T805 amod innate,immunity
R392 T805 T803 pobj immunity,of
R393 T806 T802 punct ",",modulation
R394 T807 T808 compound macrophage,survival
R395 T808 T802 conj survival,modulation
R396 T809 T808 punct ",",survival
R397 T810 T808 cc and,survival
R398 T811 T808 conj inhibition,survival
R399 T812 T811 prep of,inhibition
R400 T813 T814 compound plasminogen,activators
R401 T814 T812 pobj activators,of
R402 T815 T789 punct .,induced
R403 T816 T827 npadvmod Lipopolysaccharide,induce
R404 T817 T818 punct (,LPS
R405 T818 T816 appos LPS,Lipopolysaccharide
R406 T819 T816 punct ),Lipopolysaccharide
R407 T820 T816 punct ",",Lipopolysaccharide
R408 T821 T824 det a,endotoxin
R409 T822 T824 amod potent,endotoxin
R410 T823 T824 amod bacterial,endotoxin
R411 T824 T816 appos endotoxin,Lipopolysaccharide
R412 T825 T827 punct ",",induce
R413 T826 T827 aux can,induce
R414 T827 T827 ROOT induce,induce
R415 T828 T829 compound SerpinB2,expression
R416 T829 T827 dobj expression,induce

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T267 102-104 IN denotes of
T266 91-101 NN denotes modulation
T265 87-90 DT denotes the
T264 84-86 TO denotes to
T263 77-83 VB denotes linked
T262 74-76 VB denotes is
T261 70-73 CC denotes and
T260 62-69 NN denotes stimuli
T259 49-61 JJ denotes inflammatory
T258 46-48 TO denotes to
T257 37-45 NN denotes response
T256 34-36 IN denotes in
T255 22-33 NN denotes macrophages
T254 19-21 IN denotes in
T253 11-18 VB denotes induced
T252 4-10 RB denotes highly
T251 1-3 VB denotes is
T292 261-271 NN denotes expression
T291 252-260 NN denotes SerpinB2
T290 245-251 VB denotes induce
T289 241-244 MD denotes can
T288 239-240 -COMMA- denotes ,
T287 230-239 NN denotes endotoxin
T286 220-229 JJ denotes bacterial
T285 213-219 JJ denotes potent
T284 211-212 DT denotes a
T283 209-210 -COMMA- denotes ,
T282 208-209 -RRB- denotes )
T281 205-208 NN denotes LPS
T280 204-205 -LRB- denotes (
T279 185-203 NN denotes Lipopolysaccharide
T278 173-183 NN denotes activators
T277 161-172 NN denotes plasminogen
T276 158-160 IN denotes of
T275 147-157 NN denotes inhibition
T274 143-146 CC denotes and
T273 141-142 -COMMA- denotes ,
T272 133-141 NN denotes survival
T271 122-132 NN denotes macrophage
T270 120-121 -COMMA- denotes ,
T269 112-120 NN denotes immunity
T268 105-111 JJ denotes innate
R63 T253 T251 arg2Of induced,is
R64 T253 T252 arg1Of induced,highly
R65 T253 T254 arg1Of induced,in
R66 T253 T256 arg1Of induced,in
R67 T253 T261 arg1Of induced,and
R68 T255 T254 arg2Of macrophages,in
R69 T257 T256 arg2Of response,in
R70 T257 T258 arg1Of response,to
R71 T260 T258 arg2Of stimuli,to
R72 T260 T259 arg1Of stimuli,inflammatory
R73 T263 T261 arg2Of linked,and
R74 T263 T262 arg2Of linked,is
R75 T263 T264 arg1Of linked,to
R76 T266 T264 arg2Of modulation,to
R77 T266 T265 arg1Of modulation,the
R78 T266 T267 arg1Of modulation,of
R79 T269 T268 arg1Of immunity,innate
R80 T269 T270 arg1Of immunity,","
R81 T270 T274 arg1Of ",",and
R82 T272 T270 arg2Of survival,","
R83 T272 T271 arg1Of survival,macrophage
R84 T274 T267 arg2Of and,of
R85 T274 T273 arg1Of and,","
R86 T275 T274 arg2Of inhibition,and
R87 T275 T276 arg1Of inhibition,of
R88 T278 T276 arg2Of activators,of
R89 T278 T277 arg1Of activators,plasminogen
R90 T279 T280 arg1Of Lipopolysaccharide,(
R91 T279 T283 arg1Of Lipopolysaccharide,","
R92 T279 T289 arg1Of Lipopolysaccharide,can
R93 T279 T290 arg1Of Lipopolysaccharide,induce
R94 T281 T280 arg2Of LPS,(
R95 T282 T280 arg3Of ),(
R96 T287 T283 arg2Of endotoxin,","
R97 T287 T284 arg1Of endotoxin,a
R98 T287 T285 arg1Of endotoxin,potent
R99 T287 T286 arg1Of endotoxin,bacterial
R100 T290 T288 arg1Of induce,","
R101 T290 T289 arg2Of induce,can
R105 T292 T290 arg2Of expression,induce
R106 T292 T291 arg1Of expression,SerpinB2

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T162 252-260 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T531 252-260 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T183 147-183 http://purl.obolibrary.org/obo/GO_0010757 denotes inhibition of plasminogen activators
T182 105-120 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immunity
T180 37-61 http://purl.obolibrary.org/obo/GO_0006954 denotes response to inflammatory
T179 161-183 http://purl.obolibrary.org/obo/GO_0031639 denotes plasminogen activators

simple1

Id Subject Object Predicate Lexical cue
T215 252-260 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T514 245-251 Positive_regulation denotes induce
T513 261-271 Gene_expression denotes expression
T512 11-18 Positive_regulation denotes induced
T496 252-260 Protein denotes SerpinB2
R308 T513 T514 themeOf expression,induce
R680 T496 T513 themeOf SerpinB2,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T606 252-260 Protein denotes SerpinB2
T622 11-18 Positive_regulation denotes induced
T623 261-271 Gene_expression denotes expression
T624 245-251 Positive_regulation denotes induce
R718 T606 T623 themeOf SerpinB2,expression
R733 T623 T624 themeOf expression,induce

DLUT931

Id Subject Object Predicate Lexical cue
T572 252-260 Protein denotes SerpinB2
T589 11-18 Positive_regulation denotes induced
T590 261-271 Gene_expression denotes expression
T591 245-251 Positive_regulation denotes induce
R685 T572 T590 themeOf SerpinB2,expression
R693 T590 T591 themeOf expression,induce

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T759 252-271 Gene_expression denotes SerpinB2 expression
T750 205-208 Entity denotes LPS
T748 252-260 Protein denotes SerpinB2
T705 122-132 Entity denotes macrophage
T709 185-210 Entity denotes Lipopolysaccharide (LPS),
T711 230-239 Entity denotes endotoxin
T723 22-33 Entity denotes macrophages
T733 158-183 Entity denotes of plasminogen activators
T745 161-172 Protein denotes plasminogen
R348 T748 T759 themeOf SerpinB2,SerpinB2 expression

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T647 245-251 Positive_regulation denotes induce
T646 261-271 Gene_expression denotes expression
T645 252-260 Protein denotes SerpinB2
T644 147-157 Negative_regulation denotes inhibition
T643 11-18 Positive_regulation denotes induced
T642 11-18 Positive_regulation denotes induced
T641 161-183 Protein denotes plasminogen activators
R323 T641 T644 themeOf plasminogen activators,inhibition
R324 T645 T646 themeOf SerpinB2,expression
R325 T646 T647 themeOf expression,induce

testone

Id Subject Object Predicate Lexical cue
T40 261-271 Gene_expression denotes expression
T39 245-251 Positive_regulation denotes induce
T25 252-260 Protein denotes SerpinB2
R8 T40 T39 themeOf expression,induce
R2 T25 T40 themeOf SerpinB2,expression

test3

Id Subject Object Predicate Lexical cue
T76 261-271 Gene_expression denotes expression
T75 252-260 Protein denotes SerpinB2
T74 245-251 Positive_regulation denotes induce
T73 11-18 Positive_regulation denotes induced
T54 252-260 Protein denotes SerpinB2
R17 T75 T76 themeOf SerpinB2,expression
R18 T76 T74 themeOf expression,induce