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PMC:3589482 / 2065-2288 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2566 222-223 . denotes .
T2565 219-222 NNP denotes LPS
T2564 209-218 NN denotes component
T2563 204-208 NN denotes wall
T2562 199-203 NN denotes cell
T2561 189-198 JJ denotes bacterial
T2560 175-188 JJ denotes gram-negative
T2559 171-174 DT denotes the
T2558 168-170 TO denotes to
T2557 159-167 NN denotes exposure
T2556 154-158 IN denotes upon
T2555 142-153 NNS denotes macrophages
T2554 139-141 IN denotes by
T2553 129-138 VBN denotes expressed
T2552 120-128 NNS denotes products
T2551 115-119 NN denotes gene
T2550 105-114 JJ denotes inducible
T2549 99-104 JJ denotes other
T2548 95-98 CC denotes and
T2547 85-94 NNS denotes cytokines
T2546 82-84 IN denotes by
T2545 73-81 VBN denotes mediated
T2544 69-72 VBP denotes are
T2543 60-68 NN denotes response
T2542 47-59 JJ denotes inflammatory
T2541 43-46 DT denotes the
T2540 40-42 IN denotes of
T2539 25-39 NNS denotes manifestations
T2538 12-24 JJ denotes pathological
T2537 8-11 DT denotes the
T2536 5-7 IN denotes of
T2535 0-4 JJ denotes Many
R1656 T2539 T2536 pobj manifestations,of
R1657 T2540 T2539 prep of,manifestations
R1659 T2541 T2543 det the,response
R1660 T2542 T2543 amod inflammatory,response
R1661 T2543 T2540 pobj response,of
R1663 T2544 T2545 auxpass are,mediated
R1664 T2545 T2545 ROOT mediated,mediated
R1665 T2546 T2545 agent by,mediated
R1667 T2547 T2546 pobj cytokines,by
R1668 T2548 T2547 cc and,cytokines
R1670 T2549 T2552 amod other,products
R1671 T2550 T2552 amod inducible,products
R1674 T2551 T2552 compound gene,products
R1675 T2552 T2547 conj products,cytokines
R1677 T2553 T2552 acl expressed,products
R1678 T2554 T2553 agent by,expressed
R1679 T2555 T2554 pobj macrophages,by
R1681 T2556 T2553 prep upon,expressed
R1682 T2557 T2556 pobj exposure,upon
R1684 T2558 T2557 prep to,exposure
R1685 T2559 T2564 det the,component
R1687 T2560 T2563 amod gram-negative,wall
R1688 T2561 T2563 amod bacterial,wall
R1690 T2562 T2563 compound cell,wall
R1691 T2563 T2564 compound wall,component
R1692 T2564 T2558 pobj component,to
R1694 T2565 T2564 dobj LPS,component
R1695 T2566 T2545 punct .,mediated
R1735 T2535 T2545 nsubjpass Many,mediated
R1740 T2536 T2535 prep of,Many
R1744 T2537 T2539 det the,manifestations
R1747 T2538 T2539 amod pathological,manifestations

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1498 219-222 NN denotes LPS
T1497 209-218 NN denotes component
T1496 204-208 NN denotes wall
T1495 199-203 NN denotes cell
T1494 189-198 JJ denotes bacterial
T1493 175-188 JJ denotes gram-negative
T1492 171-174 DT denotes the
T1491 168-170 TO denotes to
T1490 159-167 NN denotes exposure
T1489 154-158 IN denotes upon
T1488 142-153 NN denotes macrophages
T1487 139-141 IN denotes by
T1486 129-138 VB denotes expressed
T1485 120-128 NN denotes products
T1484 115-119 NN denotes gene
T1483 105-114 JJ denotes inducible
T1482 99-104 JJ denotes other
T1481 95-98 CC denotes and
T1480 85-94 NN denotes cytokines
T1479 82-84 IN denotes by
T1478 73-81 VB denotes mediated
T1477 69-72 VB denotes are
T1476 60-68 NN denotes response
T1475 47-59 JJ denotes inflammatory
T1474 43-46 DT denotes the
T1473 40-42 IN denotes of
T1472 25-39 NN denotes manifestations
T1471 12-24 JJ denotes pathological
T1470 8-11 DT denotes the
T1469 5-7 IN denotes of
T1468 0-4 JJ denotes Many
R869 T1468 T1469 arg1Of Many,of
R870 T1468 T1477 arg1Of Many,are
R871 T1468 T1478 arg2Of Many,mediated
R872 T1472 T1469 arg2Of manifestations,of
R873 T1472 T1470 arg1Of manifestations,the
R874 T1472 T1471 arg1Of manifestations,pathological
R875 T1472 T1473 arg1Of manifestations,of
R876 T1476 T1473 arg2Of response,of
R877 T1476 T1474 arg1Of response,the
R878 T1476 T1475 arg1Of response,inflammatory
R879 T1478 T1477 arg2Of mediated,are
R880 T1480 T1481 arg1Of cytokines,and
R881 T1481 T1478 arg1Of and,mediated
R882 T1481 T1479 arg2Of and,by
R883 T1481 T1486 arg2Of and,expressed
R884 T1485 T1481 arg2Of products,and
R885 T1485 T1482 arg1Of products,other
R886 T1485 T1483 arg1Of products,inducible
R887 T1485 T1484 arg1Of products,gene
R888 T1486 T1489 arg1Of expressed,upon
R889 T1488 T1486 arg1Of macrophages,expressed
R890 T1488 T1487 arg2Of macrophages,by
R891 T1490 T1489 arg2Of exposure,upon
R892 T1490 T1491 arg1Of exposure,to
R893 T1498 T1491 arg2Of LPS,to
R894 T1498 T1492 arg1Of LPS,the
R895 T1498 T1493 arg1Of LPS,gram-negative
R896 T1498 T1494 arg1Of LPS,bacterial
R897 T1498 T1495 arg1Of LPS,cell
R898 T1498 T1496 arg1Of LPS,wall
R899 T1498 T1497 arg1Of LPS,component

GO-BP

Id Subject Object Predicate Lexical cue
T1326 47-68 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory response

GO-CC

Id Subject Object Predicate Lexical cue
T1392 199-208 http://purl.obolibrary.org/obo/GO_0005618 denotes cell wall
T1388 199-203 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T1206 0-223 Sentence denotes Many of the pathological manifestations of the inflammatory response are mediated by cytokines and other inducible gene products expressed by macrophages upon exposure to the gram-negative bacterial cell wall component LPS.
T16 0-223 Sentence denotes Many of the pathological manifestations of the inflammatory response are mediated by cytokines and other inducible gene products expressed by macrophages upon exposure to the gram-negative bacterial cell wall component LPS.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2456 99-128 Protein denotes other inducible gene products
T2448 85-94 Protein denotes cytokines
T2409 171-222 Entity denotes the gram-negative bacterial cell wall component LPS
T2386 199-208 Entity denotes cell wall
T2375 139-153 Entity denotes by macrophages