PMC:3589482 / 20360-21919
Annnotations
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23359 | 1558-1559 | . | denotes | . |
| T23358 | 1554-1558 | NN | denotes | site |
| T23357 | 1543-1553 | NN | denotes | initiation |
| T23356 | 1529-1542 | NN | denotes | transcription |
| T23355 | 1527-1528 | SYM | denotes | = |
| T23354 | 1523-1526 | FW | denotes | tis |
| T23353 | 1521-1522 | , | denotes | , |
| T23352 | 1515-1521 | NN | denotes | repeat |
| T23351 | 1499-1514 | NN | denotes | tetranucleotide |
| T23350 | 1494-1498 | NNP | denotes | TATG |
| T23349 | 1492-1493 | SYM | denotes | = |
| T23348 | 1490-1491 | VBP | denotes | n |
| T23347 | 1489-1490 | -RRB- | denotes | ) |
| T23346 | 1485-1489 | NNP | denotes | TATG |
| T23345 | 1484-1485 | -LRB- | denotes | ( |
| T23344 | 1482-1483 | , | denotes | , |
| T23343 | 1481-1482 | -RRB- | denotes | ) |
| T23342 | 1478-1481 | NNP | denotes | LTR |
| T23341 | 1477-1478 | -LRB- | denotes | ( |
| T23340 | 1470-1476 | NN | denotes | repeat |
| T23339 | 1461-1469 | NN | denotes | terminal |
| T23338 | 1456-1460 | JJ | denotes | long |
| T23337 | 1450-1455 | CD | denotes | MLT1L |
| T23336 | 1448-1449 | SYM | denotes | = |
| T23335 | 1442-1447 | NNP | denotes | MLT1L |
| T23334 | 1440-1441 | , | denotes | , |
| T23333 | 1436-1440 | NNP | denotes | SINE |
| T23332 | 1432-1435 | NNP | denotes | MIR |
| T23331 | 1430-1431 | SYM | denotes | = |
| T23330 | 1426-1429 | NNP | denotes | MIR |
| T23329 | 1424-1425 | , | denotes | , |
| T23328 | 1420-1424 | NNP | denotes | LINE |
| T23327 | 1417-1419 | CD | denotes | L2 |
| T23326 | 1414-1415 | SYM | denotes | = |
| T23325 | 1411-1413 | NNP | denotes | L2 |
| T23324 | 1409-1410 | , | denotes | , |
| T23323 | 1408-1409 | -RRB- | denotes | ) |
| T23322 | 1404-1408 | NNP | denotes | LINE |
| T23321 | 1403-1404 | -LRB- | denotes | ( |
| T23320 | 1395-1402 | NN | denotes | element |
| T23319 | 1387-1394 | JJ | denotes | nuclear |
| T23318 | 1374-1386 | VBN | denotes | interspersed |
| T23317 | 1369-1373 | JJ | denotes | long |
| T23316 | 1366-1368 | CD | denotes | L1 |
| T23315 | 1363-1364 | SYM | denotes | = |
| T23314 | 1360-1362 | NNP | denotes | L1 |
| T23313 | 1358-1359 | , | denotes | , |
| T23312 | 1357-1358 | -RRB- | denotes | ) |
| T23311 | 1353-1357 | NNP | denotes | SINE |
| T23310 | 1352-1353 | -LRB- | denotes | ( |
| T23309 | 1345-1351 | NN | denotes | repeat |
| T23308 | 1337-1344 | JJ | denotes | nuclear |
| T23307 | 1324-1336 | VBN | denotes | interspersed |
| T23306 | 1318-1323 | JJ | denotes | short |
| T23305 | 1314-1317 | CD | denotes | ID4 |
| T23304 | 1311-1312 | SYM | denotes | = |
| T23303 | 1307-1310 | NNP | denotes | ID4 |
| T23302 | 1305-1306 | , | denotes | , |
| T23301 | 1299-1305 | NN | denotes | repeat |
| T23300 | 1295-1298 | NNP | denotes | Alu |
| T23299 | 1293-1294 | SYM | denotes | = |
| T23298 | 1289-1292 | NNP | denotes | Alu |
| T23297 | 1287-1288 | . | denotes | . |
| T23296 | 1280-1287 | NNS | denotes | regions |
| T23295 | 1271-1279 | NN | denotes | flanking |
| T23294 | 1269-1270 | NN | denotes | ′ |
| T23293 | 1268-1269 | CD | denotes | 5 |
| T23292 | 1263-1267 | DT | denotes | both |
| T23291 | 1260-1262 | IN | denotes | in |
| T23290 | 1251-1259 | NNS | denotes | elements |
| T23289 | 1242-1250 | NN | denotes | sequence |
| T23288 | 1231-1241 | JJ | denotes | repetitive |
| T23287 | 1228-1230 | IN | denotes | by |
| T23286 | 1216-1227 | VBN | denotes | interrupted |
| T23285 | 1212-1215 | VBP | denotes | are |
| T23284 | 1204-1211 | NNS | denotes | regions |
| T23283 | 1193-1203 | JJ | denotes | Homologous |
| T23282 | 1191-1192 | . | denotes | . |
| T23281 | 1186-1191 | NNS | denotes | boxes |
| T23280 | 1178-1185 | VBN | denotes | colored |
| T23279 | 1173-1177 | JJ | denotes | same |
| T23278 | 1169-1172 | DT | denotes | the |
| T23277 | 1166-1168 | IN | denotes | by |
| T23276 | 1156-1165 | VBN | denotes | indicated |
| T23275 | 1147-1155 | NN | denotes | identity |
| T23274 | 1138-1146 | NN | denotes | sequence |
| T23273 | 1127-1137 | NN | denotes | nucleotide |
| T23272 | 1124-1126 | IN | denotes | of |
| T23271 | 1116-1123 | NNS | denotes | regions |
| T23270 | 1111-1115 | IN | denotes | with |
| T23269 | 1103-1110 | NNS | denotes | regions |
| T23268 | 1094-1102 | NN | denotes | flanking |
| T23267 | 1092-1093 | NN | denotes | ′ |
| T23266 | 1091-1092 | CD | denotes | 5 |
| T23265 | 1082-1090 | NN | denotes | SerpinB2 |
| T23264 | 1075-1081 | JJ | denotes | murine |
| T23263 | 1071-1074 | CC | denotes | and |
| T23262 | 1065-1070 | JJ | denotes | human |
| T23261 | 1061-1064 | DT | denotes | the |
| T23260 | 1058-1060 | IN | denotes | of |
| T23259 | 1043-1057 | NN | denotes | representation |
| T23258 | 1033-1042 | JJ | denotes | Schematic |
| T23257 | 1031-1032 | . | denotes | . |
| T23256 | 1024-1031 | NNS | denotes | regions |
| T23255 | 1015-1023 | NN | denotes | flanking |
| T23247 | 974-981 | IN | denotes | between |
| T23246 | 961-973 | NN | denotes | conservation |
| T23245 | 952-960 | NN | denotes | sequence |
| T23244 | 948-951 | NNP | denotes | DNA |
| T23243 | 946-947 | -RRB- | denotes | ) |
| T23242 | 945-946 | NNP | denotes | C |
| T23241 | 944-945 | -LRB- | denotes | ( |
| T23240 | 942-943 | . | denotes | . |
| T23239 | 931-942 | NNS | denotes | experiments |
| T23238 | 919-930 | JJ | denotes | independent |
| T23237 | 914-918 | CD | denotes | four |
| T23236 | 911-913 | IN | denotes | of |
| T23235 | 907-910 | NNP | denotes | SEM |
| T23234 | 903-906 | CC | denotes | and |
| T23233 | 898-902 | NN | denotes | mean |
| T23232 | 894-897 | DT | denotes | the |
| T23231 | 884-893 | VBP | denotes | represent |
| T23230 | 876-883 | NNS | denotes | results |
| T23229 | 872-875 | DT | denotes | The |
| T23228 | 870-871 | . | denotes | . |
| T23227 | 861-870 | NN | denotes | treatment |
| T23226 | 851-860 | VBG | denotes | following |
| T23225 | 842-850 | NN | denotes | activity |
| T23224 | 837-841 | NN | denotes | gene |
| T23223 | 828-836 | NN | denotes | reporter |
| T23222 | 817-827 | NN | denotes | luciferase |
| T23221 | 808-816 | JJ | denotes | relative |
| T23220 | 804-807 | DT | denotes | the |
| T23219 | 801-803 | VBZ | denotes | is |
| T23218 | 795-800 | VBN | denotes | Shown |
| T23217 | 793-794 | . | denotes | . |
| T23216 | 790-793 | NNS | denotes | hrs |
| T23215 | 787-789 | CD | denotes | 16 |
| T23214 | 783-786 | IN | denotes | for |
| T23213 | 779-782 | NNP | denotes | PMA |
| T23212 | 773-778 | JJ | denotes | ng/ml |
| T23211 | 770-772 | CD | denotes | 40 |
| T23210 | 767-769 | CC | denotes | or |
| T23209 | 763-766 | NNP | denotes | LPS |
| T23208 | 757-762 | JJ | denotes | ng/ml |
| T23207 | 753-756 | CD | denotes | 100 |
| T23206 | 748-752 | IN | denotes | with |
| T23205 | 740-747 | VBN | denotes | treated |
| T23204 | 737-739 | CC | denotes | or |
| T23203 | 727-736 | JJ | denotes | untreated |
| T23202 | 722-726 | VBN | denotes | left |
| T23201 | 715-721 | RB | denotes | either |
| T23200 | 710-714 | VBD | denotes | were |
| T23199 | 704-709 | NNS | denotes | Cells |
| T23198 | 702-703 | . | denotes | . |
| T23197 | 694-702 | NNS | denotes | plasmids |
| T23196 | 686-693 | NN | denotes | control |
| T23195 | 682-685 | CC | denotes | and |
| T23194 | 671-681 | NNS | denotes | constructs |
| T23193 | 662-670 | NN | denotes | reporter |
| T23192 | 642-661 | JJ | denotes | promoter-luciferase |
| T23191 | 633-641 | NNP | denotes | SerpinB2 |
| T23190 | 626-632 | NN | denotes | murine |
| T23189 | 616-625 | VBN | denotes | indicated |
| T23188 | 612-615 | DT | denotes | the |
| T23187 | 607-611 | IN | denotes | with |
| T23186 | 595-606 | VBN | denotes | transfected |
| T23185 | 583-594 | RB | denotes | transiently |
| T23184 | 578-582 | VBD | denotes | were |
| T23183 | 566-577 | NNS | denotes | macrophages |
| T23182 | 560-565 | CD | denotes | 264.7 |
| T23181 | 556-559 | NNP | denotes | RAW |
| T23180 | 554-555 | -RRB- | denotes | ) |
| T23179 | 553-554 | NNP | denotes | B |
| T23178 | 552-553 | -LRB- | denotes | ( |
| T23177 | 550-551 | . | denotes | . |
| T23176 | 542-550 | NN | denotes | sequence |
| T23175 | 533-541 | NN | denotes | flanking |
| T23174 | 531-532 | NN | denotes | ′ |
| T23173 | 530-531 | CD | denotes | 5 |
| T23172 | 521-529 | CD | denotes | SerpinB2 |
| T23171 | 514-520 | NN | denotes | murine |
| T23170 | 511-513 | IN | denotes | of |
| T23169 | 500-510 | NN | denotes | nucleotide |
| T23168 | 498-499 | NN | denotes | ′ |
| T23167 | 497-498 | CD | denotes | 5 |
| T23166 | 492-496 | RBS | denotes | most |
| T23165 | 488-491 | DT | denotes | the |
| T23164 | 479-487 | VBP | denotes | indicate |
| T23163 | 473-478 | NNS | denotes | names |
| T23162 | 463-472 | VB | denotes | Construct |
| T23161 | 461-462 | . | denotes | . |
| T23160 | 454-461 | NNS | denotes | primers |
| T23159 | 450-453 | NNP | denotes | PCR |
| T23158 | 434-449 | NN | denotes | oligonucleotide |
| T23157 | 425-433 | JJ | denotes | specific |
| T23156 | 420-424 | IN | denotes | with |
| T23155 | 417-419 | CC | denotes | or |
| T23154 | 411-416 | NNS | denotes | sites |
| T23153 | 404-410 | NN | denotes | enzyme |
| T23152 | 392-403 | NN | denotes | restriction |
| T23151 | 386-391 | VBG | denotes | using |
| T23150 | 376-385 | VBN | denotes | generated |
| T23149 | 371-375 | VBD | denotes | were |
| T23148 | 361-370 | NNS | denotes | deletions |
| T23147 | 359-360 | NN | denotes | ′ |
| T23146 | 358-359 | CD | denotes | 5 |
| T23145 | 354-357 | CC | denotes | and |
| T23144 | 349-353 | NN | denotes | gene |
| T23143 | 340-348 | NN | denotes | reporter |
| T23142 | 329-339 | NN | denotes | luciferase |
| T23141 | 325-328 | DT | denotes | the |
| T23140 | 322-324 | IN | denotes | of |
| T23139 | 313-321 | RB | denotes | upstream |
| T23138 | 304-312 | VBN | denotes | inserted |
| T23137 | 300-303 | VBD | denotes | was |
| T23136 | 296-299 | CD | denotes | +92 |
| T23135 | 293-295 | TO | denotes | to |
| T23134 | 288-292 | CD | denotes | 4480 |
| T23133 | 287-288 | CD | denotes | − |
| T23132 | 282-286 | IN | denotes | from |
| T23131 | 275-281 | NN | denotes | region |
| T23130 | 266-274 | NN | denotes | flanking |
| T23129 | 264-265 | NN | denotes | ′ |
| T23128 | 263-264 | CD | denotes | 5 |
| T23127 | 256-262 | NN | denotes | murine |
| T23126 | 252-255 | DT | denotes | The |
| T23125 | 250-251 | . | denotes | . |
| T23124 | 240-250 | NNS | denotes | constructs |
| T23123 | 231-239 | NN | denotes | reporter |
| T23122 | 220-230 | NN | denotes | luciferase |
| T23121 | 211-219 | NN | denotes | deletion |
| T23120 | 209-210 | NN | denotes | ′ |
| T23119 | 208-209 | CD | denotes | 5 |
| T23118 | 204-207 | CC | denotes | and |
| T23117 | 195-203 | NN | denotes | promoter |
| T23116 | 186-194 | NNP | denotes | SerpinB2 |
| T23115 | 179-185 | NN | denotes | murine |
| T23114 | 175-178 | DT | denotes | the |
| T23113 | 172-174 | IN | denotes | of |
| T23112 | 157-171 | NN | denotes | representation |
| T23111 | 147-156 | JJ | denotes | Schematic |
| T23110 | 145-146 | -RRB- | denotes | ) |
| T23109 | 144-145 | NN | denotes | A |
| T23108 | 143-144 | -LRB- | denotes | ( |
| T23107 | 141-142 | . | denotes | . |
| T23106 | 133-141 | NN | denotes | promoter |
| T23105 | 124-132 | NNP | denotes | SerpinB2 |
| T23104 | 117-123 | NN | denotes | murine |
| T23103 | 113-116 | DT | denotes | the |
| T23102 | 110-112 | IN | denotes | in |
| T23101 | 102-109 | NNS | denotes | regions |
| T23100 | 87-101 | JJ | denotes | PMA-responsive |
| T23099 | 83-86 | CC | denotes | and |
| T23098 | 79-82 | NNP | denotes | LPS |
| T23097 | 76-78 | IN | denotes | of |
| T23096 | 67-75 | NN | denotes | analysis |
| T23095 | 62-66 | NN | denotes | gene |
| T23094 | 53-61 | NN | denotes | reporter |
| T23093 | 44-52 | NN | denotes | Deletion |
| T23254 | 1013-1014 | NN | denotes | ′ |
| T23253 | 1012-1013 | CD | denotes | 5 |
| T23252 | 1003-1011 | NN | denotes | SerpinB2 |
| T23251 | 996-1002 | JJ | denotes | murine |
| T23250 | 992-995 | CC | denotes | and |
| T23249 | 986-991 | JJ | denotes | human |
| T23248 | 982-985 | DT | denotes | the |
| R16592 | T23093 | T23096 | compound | Deletion,analysis |
| R16593 | T23094 | T23096 | compound | reporter,analysis |
| R16594 | T23095 | T23096 | compound | gene,analysis |
| R16595 | T23096 | T23096 | ROOT | analysis,analysis |
| R16596 | T23097 | T23096 | prep | of,analysis |
| R16597 | T23098 | T23097 | pobj | LPS,of |
| R16598 | T23099 | T23098 | cc | and,LPS |
| R16599 | T23100 | T23101 | amod | PMA-responsive,regions |
| R16600 | T23101 | T23098 | conj | regions,LPS |
| R16601 | T23102 | T23096 | prep | in,analysis |
| R16602 | T23103 | T23106 | det | the,promoter |
| R16603 | T23104 | T23106 | compound | murine,promoter |
| R16604 | T23105 | T23106 | compound | SerpinB2,promoter |
| R16605 | T23106 | T23102 | pobj | promoter,in |
| R16606 | T23107 | T23096 | punct | .,analysis |
| R16607 | T23108 | T23109 | punct | (,A |
| R16608 | T23109 | T23112 | nmod | A,representation |
| R16609 | T23110 | T23109 | punct | ),A |
| R16610 | T23111 | T23112 | amod | Schematic,representation |
| R16611 | T23112 | T23112 | ROOT | representation,representation |
| R16612 | T23113 | T23112 | prep | of,representation |
| R16613 | T23114 | T23117 | det | the,promoter |
| R16614 | T23115 | T23117 | compound | murine,promoter |
| R16615 | T23116 | T23117 | compound | SerpinB2,promoter |
| R16616 | T23117 | T23113 | pobj | promoter,of |
| R16617 | T23118 | T23112 | cc | and,representation |
| R16618 | T23119 | T23120 | nummod | 5,′ |
| R16619 | T23120 | T23121 | npadvmod | ′,deletion |
| R16620 | T23121 | T23124 | nmod | deletion,constructs |
| R16621 | T23122 | T23124 | compound | luciferase,constructs |
| R16622 | T23123 | T23124 | compound | reporter,constructs |
| R16623 | T23124 | T23112 | conj | constructs,representation |
| R16624 | T23125 | T23112 | punct | .,representation |
| R16625 | T23126 | T23131 | det | The,region |
| R16626 | T23127 | T23131 | amod | murine,region |
| R16627 | T23128 | T23129 | nummod | 5,′ |
| R16628 | T23129 | T23131 | compound | ′,region |
| R16629 | T23130 | T23131 | compound | flanking,region |
| R16630 | T23131 | T23138 | nsubjpass | region,inserted |
| R16631 | T23132 | T23131 | prep | from,region |
| R16632 | T23133 | T23132 | pobj | −,from |
| R16633 | T23134 | T23138 | nsubjpass | 4480,inserted |
| R16634 | T23135 | T23138 | prep | to,inserted |
| R16635 | T23136 | T23135 | pobj | +92,to |
| R16636 | T23137 | T23138 | auxpass | was,inserted |
| R16637 | T23138 | T23138 | ROOT | inserted,inserted |
| R16638 | T23139 | T23138 | advmod | upstream,inserted |
| R16639 | T23140 | T23139 | prep | of,upstream |
| R16640 | T23141 | T23144 | det | the,gene |
| R16641 | T23142 | T23144 | compound | luciferase,gene |
| R16642 | T23143 | T23144 | compound | reporter,gene |
| R16643 | T23144 | T23140 | pobj | gene,of |
| R16644 | T23145 | T23139 | cc | and,upstream |
| R16645 | T23146 | T23148 | nummod | 5,deletions |
| R16646 | T23147 | T23148 | compound | ′,deletions |
| R16647 | T23148 | T23150 | nsubjpass | deletions,generated |
| R16648 | T23149 | T23150 | auxpass | were,generated |
| R16649 | T23150 | T23138 | conj | generated,inserted |
| R16650 | T23151 | T23150 | advcl | using,generated |
| R16651 | T23152 | T23154 | compound | restriction,sites |
| R16652 | T23153 | T23154 | compound | enzyme,sites |
| R16653 | T23154 | T23151 | dobj | sites,using |
| R16654 | T23155 | T23151 | cc | or,using |
| R16655 | T23156 | T23150 | prep | with,generated |
| R16656 | T23157 | T23160 | amod | specific,primers |
| R16657 | T23158 | T23160 | amod | oligonucleotide,primers |
| R16658 | T23159 | T23160 | compound | PCR,primers |
| R16659 | T23160 | T23156 | pobj | primers,with |
| R16660 | T23161 | T23150 | punct | .,generated |
| R16661 | T23162 | T23163 | amod | Construct,names |
| R16662 | T23163 | T23164 | nsubj | names,indicate |
| R16663 | T23164 | T23164 | ROOT | indicate,indicate |
| R16664 | T23165 | T23169 | det | the,nucleotide |
| R16665 | T23166 | T23167 | advmod | most,5 |
| R16666 | T23167 | T23168 | nummod | 5,′ |
| R16667 | T23168 | T23169 | compound | ′,nucleotide |
| R16668 | T23169 | T23164 | dobj | nucleotide,indicate |
| R16669 | T23170 | T23169 | prep | of,nucleotide |
| R16670 | T23171 | T23176 | nmod | murine,sequence |
| R16671 | T23172 | T23171 | nummod | SerpinB2,murine |
| R16672 | T23173 | T23174 | nummod | 5,′ |
| R16673 | T23174 | T23176 | compound | ′,sequence |
| R16674 | T23175 | T23176 | compound | flanking,sequence |
| R16675 | T23176 | T23170 | pobj | sequence,of |
| R16676 | T23177 | T23164 | punct | .,indicate |
| R16677 | T23178 | T23181 | punct | (,RAW |
| R16678 | T23179 | T23181 | nmod | B,RAW |
| R16679 | T23180 | T23181 | punct | ),RAW |
| R16680 | T23181 | T23186 | intj | RAW,transfected |
| R16681 | T23182 | T23181 | nummod | 264.7,RAW |
| R16682 | T23183 | T23186 | nsubjpass | macrophages,transfected |
| R16683 | T23184 | T23186 | auxpass | were,transfected |
| R16684 | T23185 | T23186 | advmod | transiently,transfected |
| R16685 | T23186 | T23186 | ROOT | transfected,transfected |
| R16686 | T23187 | T23186 | prep | with,transfected |
| R16687 | T23188 | T23194 | det | the,constructs |
| R16688 | T23189 | T23190 | amod | indicated,murine |
| R16689 | T23190 | T23194 | compound | murine,constructs |
| R16690 | T23191 | T23193 | nmod | SerpinB2,reporter |
| R16691 | T23192 | T23193 | amod | promoter-luciferase,reporter |
| R16692 | T23193 | T23194 | compound | reporter,constructs |
| R16693 | T23194 | T23187 | pobj | constructs,with |
| R16694 | T23195 | T23194 | cc | and,constructs |
| R16695 | T23196 | T23197 | compound | control,plasmids |
| R16696 | T23197 | T23194 | conj | plasmids,constructs |
| R16697 | T23198 | T23186 | punct | .,transfected |
| R16698 | T23199 | T23202 | nsubjpass | Cells,left |
| R16699 | T23200 | T23202 | auxpass | were,left |
| R16700 | T23201 | T23202 | preconj | either,left |
| R16701 | T23202 | T23202 | ROOT | left,left |
| R16702 | T23203 | T23202 | oprd | untreated,left |
| R16703 | T23204 | T23202 | cc | or,left |
| R16704 | T23205 | T23202 | conj | treated,left |
| R16705 | T23206 | T23205 | prep | with,treated |
| R16706 | T23207 | T23209 | nummod | 100,LPS |
| R16707 | T23208 | T23209 | compound | ng/ml,LPS |
| R16708 | T23209 | T23206 | pobj | LPS,with |
| R16709 | T23210 | T23209 | cc | or,LPS |
| R16710 | T23211 | T23213 | nummod | 40,PMA |
| R16711 | T23212 | T23213 | compound | ng/ml,PMA |
| R16712 | T23213 | T23209 | conj | PMA,LPS |
| R16713 | T23214 | T23205 | prep | for,treated |
| R16714 | T23215 | T23216 | nummod | 16,hrs |
| R16715 | T23216 | T23214 | pobj | hrs,for |
| R16716 | T23217 | T23202 | punct | .,left |
| R16717 | T23218 | T23218 | ROOT | Shown,Shown |
| R16718 | T23219 | T23218 | auxpass | is,Shown |
| R16719 | T23220 | T23225 | det | the,activity |
| R16720 | T23221 | T23225 | amod | relative,activity |
| R16721 | T23222 | T23225 | compound | luciferase,activity |
| R16722 | T23223 | T23225 | compound | reporter,activity |
| R16723 | T23224 | T23225 | compound | gene,activity |
| R16724 | T23225 | T23218 | nsubjpass | activity,Shown |
| R16725 | T23226 | T23225 | prep | following,activity |
| R16726 | T23227 | T23226 | dobj | treatment,following |
| R16727 | T23228 | T23218 | punct | .,Shown |
| R16728 | T23229 | T23230 | det | The,results |
| R16729 | T23230 | T23231 | nsubj | results,represent |
| R16730 | T23231 | T23231 | ROOT | represent,represent |
| R16731 | T23232 | T23233 | det | the,mean |
| R16732 | T23233 | T23231 | dobj | mean,represent |
| R16733 | T23234 | T23233 | cc | and,mean |
| R16734 | T23235 | T23233 | conj | SEM,mean |
| R16735 | T23236 | T23235 | prep | of,SEM |
| R16736 | T23237 | T23239 | nummod | four,experiments |
| R16737 | T23238 | T23239 | amod | independent,experiments |
| R16738 | T23239 | T23236 | pobj | experiments,of |
| R16739 | T23240 | T23231 | punct | .,represent |
| R16740 | T23241 | T23246 | punct | (,conservation |
| R16741 | T23242 | T23246 | nmod | C,conservation |
| R16742 | T23243 | T23242 | punct | ),C |
| R16743 | T23244 | T23245 | compound | DNA,sequence |
| R16744 | T23245 | T23246 | compound | sequence,conservation |
| R16745 | T23246 | T23246 | ROOT | conservation,conservation |
| R16746 | T23247 | T23246 | prep | between,conservation |
| R16747 | T23248 | T23256 | det | the,regions |
| R16748 | T23249 | T23252 | amod | human,SerpinB2 |
| R16749 | T23250 | T23249 | cc | and,human |
| R16750 | T23251 | T23249 | conj | murine,human |
| R16751 | T23252 | T23256 | nmod | SerpinB2,regions |
| R16752 | T23253 | T23252 | nummod | 5,SerpinB2 |
| R16753 | T23254 | T23256 | compound | ′,regions |
| R16754 | T23255 | T23256 | compound | flanking,regions |
| R16755 | T23256 | T23247 | pobj | regions,between |
| R16756 | T23257 | T23246 | punct | .,conservation |
| R16757 | T23258 | T23259 | amod | Schematic,representation |
| R16758 | T23259 | T23259 | ROOT | representation,representation |
| R16759 | T23260 | T23259 | prep | of,representation |
| R16760 | T23261 | T23269 | det | the,regions |
| R16761 | T23262 | T23265 | amod | human,SerpinB2 |
| R16762 | T23263 | T23262 | cc | and,human |
| R16763 | T23264 | T23262 | conj | murine,human |
| R16764 | T23265 | T23269 | nmod | SerpinB2,regions |
| R16765 | T23266 | T23267 | nummod | 5,′ |
| R16766 | T23267 | T23269 | compound | ′,regions |
| R16767 | T23268 | T23269 | compound | flanking,regions |
| R16768 | T23269 | T23260 | pobj | regions,of |
| R16769 | T23270 | T23269 | prep | with,regions |
| R16770 | T23271 | T23270 | pobj | regions,with |
| R16771 | T23272 | T23271 | prep | of,regions |
| R16772 | T23273 | T23275 | amod | nucleotide,identity |
| R16773 | T23274 | T23275 | compound | sequence,identity |
| R16774 | T23275 | T23272 | pobj | identity,of |
| R16775 | T23276 | T23259 | acl | indicated,representation |
| R16776 | T23277 | T23276 | agent | by,indicated |
| R16777 | T23278 | T23281 | det | the,boxes |
| R16778 | T23279 | T23281 | amod | same,boxes |
| R16779 | T23280 | T23281 | amod | colored,boxes |
| R16780 | T23281 | T23277 | pobj | boxes,by |
| R16781 | T23282 | T23259 | punct | .,representation |
| R16782 | T23283 | T23284 | amod | Homologous,regions |
| R16783 | T23284 | T23286 | nsubjpass | regions,interrupted |
| R16784 | T23285 | T23286 | auxpass | are,interrupted |
| R16785 | T23286 | T23286 | ROOT | interrupted,interrupted |
| R16786 | T23287 | T23286 | agent | by,interrupted |
| R16787 | T23288 | T23290 | amod | repetitive,elements |
| R16788 | T23289 | T23290 | compound | sequence,elements |
| R16789 | T23290 | T23287 | pobj | elements,by |
| R16790 | T23291 | T23290 | prep | in,elements |
| R16791 | T23292 | T23296 | det | both,regions |
| R16792 | T23293 | T23294 | nummod | 5,′ |
| R16793 | T23294 | T23296 | compound | ′,regions |
| R16794 | T23295 | T23296 | compound | flanking,regions |
| R16795 | T23296 | T23291 | pobj | regions,in |
| R16796 | T23297 | T23286 | punct | .,interrupted |
| R16797 | T23298 | T23301 | compound | Alu,repeat |
| R16798 | T23299 | T23300 | punct | =,Alu |
| R16799 | T23300 | T23301 | compound | Alu,repeat |
| R16800 | T23301 | T23301 | ROOT | repeat,repeat |
| R16801 | T23302 | T23301 | punct | ",",repeat |
| R16802 | T23303 | T23305 | quantmod | ID4,ID4 |
| R16803 | T23304 | T23305 | punct | =,ID4 |
| R16804 | T23305 | T23309 | nummod | ID4,repeat |
| R16805 | T23306 | T23307 | advmod | short,interspersed |
| R16806 | T23307 | T23309 | amod | interspersed,repeat |
| R16807 | T23308 | T23309 | amod | nuclear,repeat |
| R16808 | T23309 | T23301 | appos | repeat,repeat |
| R16809 | T23310 | T23309 | punct | (,repeat |
| R16810 | T23311 | T23309 | appos | SINE,repeat |
| R16811 | T23312 | T23309 | punct | ),repeat |
| R16812 | T23313 | T23309 | punct | ",",repeat |
| R16813 | T23314 | T23320 | nmod | L1,element |
| R16814 | T23315 | T23316 | punct | =,L1 |
| R16815 | T23316 | T23320 | nummod | L1,element |
| R16816 | T23317 | T23318 | advmod | long,interspersed |
| R16817 | T23318 | T23320 | amod | interspersed,element |
| R16818 | T23319 | T23320 | amod | nuclear,element |
| R16819 | T23320 | T23301 | appos | element,repeat |
| R16820 | T23321 | T23322 | punct | (,LINE |
| R16821 | T23322 | T23320 | appos | LINE,element |
| R16822 | T23323 | T23322 | punct | ),LINE |
| R16823 | T23324 | T23320 | punct | ",",element |
| R16824 | T23325 | T23328 | compound | L2,LINE |
| R16825 | T23326 | T23327 | punct | =,L2 |
| R16826 | T23327 | T23328 | compound | L2,LINE |
| R16827 | T23328 | T23320 | appos | LINE,element |
| R16828 | T23329 | T23328 | punct | ",",LINE |
| R16829 | T23330 | T23333 | compound | MIR,SINE |
| R16830 | T23331 | T23330 | punct | =,MIR |
| R16831 | T23332 | T23333 | compound | MIR,SINE |
| R16832 | T23333 | T23328 | appos | SINE,LINE |
| R16833 | T23334 | T23333 | punct | ",",SINE |
| R16834 | T23335 | T23340 | nmod | MLT1L,repeat |
| R16835 | T23336 | T23337 | punct | =,MLT1L |
| R16836 | T23337 | T23340 | nummod | MLT1L,repeat |
| R16837 | T23338 | T23339 | amod | long,terminal |
| R16838 | T23339 | T23340 | compound | terminal,repeat |
| R16839 | T23340 | T23333 | appos | repeat,SINE |
| R16840 | T23341 | T23342 | punct | (,LTR |
| R16841 | T23342 | T23340 | appos | LTR,repeat |
| R16842 | T23343 | T23342 | punct | ),LTR |
| R16843 | T23344 | T23333 | punct | ",",SINE |
| R16844 | T23345 | T23346 | punct | (,TATG |
| R16845 | T23346 | T23333 | appos | TATG,SINE |
| R16846 | T23347 | T23333 | punct | ),SINE |
| R16847 | T23348 | T23352 | nmod | n,repeat |
| R16848 | T23349 | T23352 | punct | =,repeat |
| R16849 | T23350 | T23352 | compound | TATG,repeat |
| R16850 | T23351 | T23352 | compound | tetranucleotide,repeat |
| R16851 | T23352 | T23358 | nmod | repeat,site |
| R16852 | T23353 | T23352 | punct | ",",repeat |
| R16853 | T23354 | T23358 | compound | tis,site |
| R16854 | T23355 | T23356 | punct | =,transcription |
| R16855 | T23356 | T23357 | compound | transcription,initiation |
| R16856 | T23357 | T23358 | compound | initiation,site |
| R16857 | T23358 | T23301 | appos | site,repeat |
| R16858 | T23359 | T23301 | punct | .,repeat |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22960 | 1554-1558 | NN | denotes | site |
| T22959 | 1543-1553 | NN | denotes | initiation |
| T22958 | 1523-1542 | NN | denotes | tis = transcription |
| T22957 | 1521-1522 | -COMMA- | denotes | , |
| T22956 | 1515-1521 | NN | denotes | repeat |
| T22955 | 1499-1514 | NN | denotes | tetranucleotide |
| T22954 | 1490-1498 | NN | denotes | n = TATG |
| T22953 | 1489-1490 | -RRB- | denotes | ) |
| T22952 | 1485-1489 | NN | denotes | TATG |
| T22951 | 1484-1485 | -LRB- | denotes | ( |
| T22950 | 1482-1483 | -COMMA- | denotes | , |
| T22949 | 1481-1482 | -RRB- | denotes | ) |
| T22948 | 1478-1481 | NN | denotes | LTR |
| T22947 | 1477-1478 | -LRB- | denotes | ( |
| T22946 | 1470-1476 | NN | denotes | repeat |
| T22945 | 1461-1469 | JJ | denotes | terminal |
| T22944 | 1456-1460 | JJ | denotes | long |
| T22943 | 1442-1455 | NN | denotes | MLT1L = MLT1L |
| T22942 | 1440-1441 | -COMMA- | denotes | , |
| T22941 | 1436-1440 | NNP | denotes | SINE |
| T22940 | 1426-1435 | NNP | denotes | MIR = MIR |
| T22939 | 1424-1425 | -COMMA- | denotes | , |
| T22938 | 1420-1424 | NNP | denotes | LINE |
| T22937 | 1417-1419 | NNP | denotes | L2 |
| T22936 | 1411-1416 | NN | denotes | L2 = |
| T22935 | 1409-1410 | -COMMA- | denotes | , |
| T22934 | 1408-1409 | -RRB- | denotes | ) |
| T22933 | 1404-1408 | NN | denotes | LINE |
| T22932 | 1403-1404 | -LRB- | denotes | ( |
| T22931 | 1395-1402 | NN | denotes | element |
| T22930 | 1387-1394 | JJ | denotes | nuclear |
| T22929 | 1374-1386 | JJ | denotes | interspersed |
| T22928 | 1369-1373 | JJ | denotes | long |
| T22927 | 1366-1368 | NN | denotes | L1 |
| T22926 | 1360-1365 | NN | denotes | L1 = |
| T22925 | 1358-1359 | -COMMA- | denotes | , |
| T22924 | 1357-1358 | -RRB- | denotes | ) |
| T22923 | 1353-1357 | NN | denotes | SINE |
| T22922 | 1352-1353 | -LRB- | denotes | ( |
| T22921 | 1345-1351 | NN | denotes | repeat |
| T22920 | 1337-1344 | JJ | denotes | nuclear |
| T22919 | 1324-1336 | JJ | denotes | interspersed |
| T22918 | 1318-1323 | JJ | denotes | short |
| T22917 | 1314-1317 | NN | denotes | ID4 |
| T22916 | 1307-1313 | NN | denotes | ID4 = |
| T22915 | 1305-1306 | -COMMA- | denotes | , |
| T22914 | 1299-1305 | NN | denotes | repeat |
| T22913 | 1289-1298 | NN | denotes | Alu = Alu |
| T22912 | 1280-1287 | NN | denotes | regions |
| T22911 | 1271-1279 | NN | denotes | flanking |
| T22910 | 1268-1270 | CD | denotes | 5′ |
| T22909 | 1263-1267 | CC | denotes | both |
| T22908 | 1260-1262 | IN | denotes | in |
| T22907 | 1251-1259 | NN | denotes | elements |
| T22906 | 1242-1250 | NN | denotes | sequence |
| T22905 | 1231-1241 | JJ | denotes | repetitive |
| T22904 | 1228-1230 | IN | denotes | by |
| T22903 | 1216-1227 | VB | denotes | interrupted |
| T22902 | 1212-1215 | VB | denotes | are |
| T22901 | 1204-1211 | NN | denotes | regions |
| T22900 | 1193-1203 | JJ | denotes | Homologous |
| T22899 | 1186-1191 | NN | denotes | boxes |
| T22898 | 1178-1185 | VB | denotes | colored |
| T22897 | 1173-1177 | JJ | denotes | same |
| T22896 | 1169-1172 | DT | denotes | the |
| T22895 | 1166-1168 | IN | denotes | by |
| T22894 | 1156-1165 | VB | denotes | indicated |
| T22893 | 1147-1155 | NN | denotes | identity |
| T22892 | 1138-1146 | NN | denotes | sequence |
| T22891 | 1127-1137 | NN | denotes | nucleotide |
| T22890 | 1124-1126 | IN | denotes | of |
| T22889 | 1116-1123 | NN | denotes | regions |
| T22888 | 1111-1115 | IN | denotes | with |
| T22887 | 1103-1110 | NN | denotes | regions |
| T22886 | 1094-1102 | NN | denotes | flanking |
| T22885 | 1091-1093 | NN | denotes | 5′ |
| T22884 | 1082-1090 | NN | denotes | SerpinB2 |
| T22883 | 1075-1081 | JJ | denotes | murine |
| T22882 | 1071-1074 | CC | denotes | and |
| T22881 | 1065-1070 | JJ | denotes | human |
| T22880 | 1061-1064 | DT | denotes | the |
| T22879 | 1058-1060 | IN | denotes | of |
| T22878 | 1043-1057 | NN | denotes | representation |
| T22877 | 1033-1042 | JJ | denotes | Schematic |
| T22876 | 1024-1031 | NN | denotes | regions |
| T22875 | 1015-1023 | NN | denotes | flanking |
| T22874 | 1012-1014 | NN | denotes | 5′ |
| T22873 | 1003-1011 | NN | denotes | SerpinB2 |
| T22872 | 996-1002 | JJ | denotes | murine |
| T22871 | 992-995 | CC | denotes | and |
| T22870 | 986-991 | JJ | denotes | human |
| T22869 | 982-985 | DT | denotes | the |
| T22868 | 974-981 | IN | denotes | between |
| T22867 | 961-973 | NN | denotes | conservation |
| T22866 | 952-960 | NN | denotes | sequence |
| T22865 | 948-951 | NN | denotes | DNA |
| T22864 | 946-947 | -RRB- | denotes | ) |
| T22863 | 945-946 | NN | denotes | C |
| T22862 | 944-945 | -LRB- | denotes | ( |
| T22861 | 931-943 | NN | denotes | experiments. |
| T22860 | 919-930 | JJ | denotes | independent |
| T22859 | 914-918 | CD | denotes | four |
| T22858 | 911-913 | IN | denotes | of |
| T22857 | 907-910 | NN | denotes | SEM |
| T22856 | 903-906 | CC | denotes | and |
| T22855 | 898-902 | NN | denotes | mean |
| T22854 | 894-897 | DT | denotes | the |
| T22853 | 884-893 | VB | denotes | represent |
| T22852 | 876-883 | NN | denotes | results |
| T22851 | 872-875 | DT | denotes | The |
| T22850 | 861-870 | NN | denotes | treatment |
| T22849 | 851-860 | VB | denotes | following |
| T22848 | 842-850 | NN | denotes | activity |
| T22847 | 837-841 | NN | denotes | gene |
| T22846 | 828-836 | NN | denotes | reporter |
| T22845 | 817-827 | NN | denotes | luciferase |
| T22844 | 808-816 | JJ | denotes | relative |
| T22843 | 804-807 | DT | denotes | the |
| T22842 | 801-803 | VB | denotes | is |
| T22836 | 773-778 | NN | denotes | ng/ml |
| T22835 | 770-772 | CD | denotes | 40 |
| T22834 | 767-769 | CC | denotes | or |
| T22833 | 763-766 | NN | denotes | LPS |
| T22832 | 757-762 | NN | denotes | ng/ml |
| T22831 | 753-756 | CD | denotes | 100 |
| T22830 | 748-752 | IN | denotes | with |
| T22829 | 740-747 | VB | denotes | treated |
| T22828 | 737-739 | CC | denotes | or |
| T22827 | 727-736 | JJ | denotes | untreated |
| T22826 | 722-726 | JJ | denotes | left |
| T22825 | 715-721 | CC | denotes | either |
| T22824 | 710-714 | VB | denotes | were |
| T22823 | 704-709 | NN | denotes | Cells |
| T22822 | 694-702 | NN | denotes | plasmids |
| T22821 | 686-693 | NN | denotes | control |
| T22820 | 682-685 | CC | denotes | and |
| T22819 | 671-681 | NN | denotes | constructs |
| T22818 | 662-670 | NN | denotes | reporter |
| T22817 | 642-661 | NN | denotes | promoter-luciferase |
| T22816 | 633-641 | NN | denotes | SerpinB2 |
| T22815 | 626-632 | JJ | denotes | murine |
| T22814 | 616-625 | VB | denotes | indicated |
| T22813 | 612-615 | DT | denotes | the |
| T22812 | 607-611 | IN | denotes | with |
| T22811 | 595-606 | VB | denotes | transfected |
| T22810 | 583-594 | RB | denotes | transiently |
| T22809 | 578-582 | VB | denotes | were |
| T22808 | 566-577 | NN | denotes | macrophages |
| T22807 | 560-565 | CD | denotes | 264.7 |
| T22806 | 556-559 | NN | denotes | RAW |
| T22805 | 554-555 | -RRB- | denotes | ) |
| T22804 | 553-554 | NN | denotes | B |
| T22803 | 552-553 | -LRB- | denotes | ( |
| T22802 | 542-551 | NN | denotes | sequence. |
| T22801 | 533-541 | NN | denotes | flanking |
| T22800 | 530-532 | NN | denotes | 5′ |
| T22799 | 521-529 | NN | denotes | SerpinB2 |
| T22798 | 514-520 | JJ | denotes | murine |
| T22797 | 511-513 | IN | denotes | of |
| T22796 | 500-510 | NN | denotes | nucleotide |
| T22795 | 497-499 | JJ | denotes | 5′ |
| T22794 | 492-496 | RB | denotes | most |
| T22793 | 488-491 | DT | denotes | the |
| T22792 | 479-487 | VB | denotes | indicate |
| T22791 | 473-478 | NN | denotes | names |
| T22790 | 463-472 | NN | denotes | Construct |
| T22789 | 454-461 | NN | denotes | primers |
| T22788 | 450-453 | NN | denotes | PCR |
| T22787 | 434-449 | NN | denotes | oligonucleotide |
| T22786 | 425-433 | JJ | denotes | specific |
| T22785 | 420-424 | IN | denotes | with |
| T22784 | 417-419 | CC | denotes | or |
| T22783 | 411-416 | NN | denotes | sites |
| T22782 | 404-410 | NN | denotes | enzyme |
| T22781 | 392-403 | NN | denotes | restriction |
| T22780 | 386-391 | VB | denotes | using |
| T22779 | 376-385 | VB | denotes | generated |
| T22778 | 371-375 | VB | denotes | were |
| T22777 | 361-370 | NN | denotes | deletions |
| T22776 | 358-360 | NN | denotes | 5′ |
| T22775 | 354-357 | CC | denotes | and |
| T22774 | 349-353 | NN | denotes | gene |
| T22773 | 340-348 | NN | denotes | reporter |
| T22772 | 329-339 | NN | denotes | luciferase |
| T22771 | 325-328 | DT | denotes | the |
| T22770 | 322-324 | IN | denotes | of |
| T22769 | 313-321 | RB | denotes | upstream |
| T22768 | 304-312 | VB | denotes | inserted |
| T22767 | 300-303 | VB | denotes | was |
| T22766 | 296-299 | CD | denotes | +92 |
| T22765 | 293-295 | TO | denotes | to |
| T22764 | 287-292 | CD | denotes | −4480 |
| T22763 | 282-286 | IN | denotes | from |
| T22762 | 275-281 | NN | denotes | region |
| T22761 | 266-274 | NN | denotes | flanking |
| T22760 | 263-265 | NN | denotes | 5′ |
| T22759 | 256-262 | JJ | denotes | murine |
| T22758 | 252-255 | DT | denotes | The |
| T22757 | 240-250 | NN | denotes | constructs |
| T22756 | 231-239 | NN | denotes | reporter |
| T22755 | 220-230 | NN | denotes | luciferase |
| T22754 | 211-219 | NN | denotes | deletion |
| T22753 | 208-210 | NN | denotes | 5′ |
| T22752 | 204-207 | CC | denotes | and |
| T22751 | 195-203 | NN | denotes | promoter |
| T22750 | 186-194 | NN | denotes | SerpinB2 |
| T22749 | 179-185 | JJ | denotes | murine |
| T22748 | 175-178 | DT | denotes | the |
| T22747 | 172-174 | IN | denotes | of |
| T22746 | 157-171 | NN | denotes | representation |
| T22745 | 147-156 | JJ | denotes | Schematic |
| T22744 | 145-146 | -RRB- | denotes | ) |
| T22743 | 144-145 | NN | denotes | A |
| T22742 | 143-144 | -LRB- | denotes | ( |
| T22741 | 133-141 | NN | denotes | promoter |
| T22740 | 124-132 | NN | denotes | SerpinB2 |
| T22739 | 117-123 | JJ | denotes | murine |
| T22738 | 113-116 | DT | denotes | the |
| T22737 | 110-112 | IN | denotes | in |
| T22736 | 102-109 | NN | denotes | regions |
| T22735 | 87-101 | JJ | denotes | PMA-responsive |
| T22734 | 83-86 | CC | denotes | and |
| T22733 | 79-82 | NN | denotes | LPS |
| T22732 | 76-78 | IN | denotes | of |
| T22731 | 67-75 | NN | denotes | analysis |
| T22730 | 62-66 | NN | denotes | gene |
| T22729 | 53-61 | NN | denotes | reporter |
| T22728 | 44-52 | NN | denotes | Deletion |
| T22841 | 795-800 | NNP | denotes | Shown |
| T22840 | 790-793 | NN | denotes | hrs |
| T22839 | 787-789 | CD | denotes | 16 |
| T22838 | 783-786 | IN | denotes | for |
| T22837 | 779-782 | NN | denotes | PMA |
| R16349 | T22731 | T22728 | arg1Of | analysis,Deletion |
| R16350 | T22731 | T22729 | arg1Of | analysis,reporter |
| R16351 | T22731 | T22730 | arg1Of | analysis,gene |
| R16352 | T22731 | T22732 | arg1Of | analysis,of |
| R16353 | T22731 | T22737 | arg1Of | analysis,in |
| R16354 | T22733 | T22734 | arg1Of | LPS,and |
| R16355 | T22734 | T22732 | arg2Of | and,of |
| R16356 | T22736 | T22734 | arg2Of | regions,and |
| R16357 | T22736 | T22735 | arg1Of | regions,PMA-responsive |
| R16358 | T22741 | T22737 | arg2Of | promoter,in |
| R16359 | T22741 | T22738 | arg1Of | promoter,the |
| R16360 | T22741 | T22739 | arg1Of | promoter,murine |
| R16361 | T22741 | T22740 | arg1Of | promoter,SerpinB2 |
| R16362 | T22743 | T22742 | arg2Of | A,( |
| R16363 | T22744 | T22742 | arg3Of | ),( |
| R16364 | T22746 | T22745 | arg1Of | representation,Schematic |
| R16365 | T22746 | T22747 | arg1Of | representation,of |
| R16366 | T22746 | T22752 | arg1Of | representation,and |
| R16367 | T22751 | T22747 | arg2Of | promoter,of |
| R16368 | T22751 | T22748 | arg1Of | promoter,the |
| R16369 | T22751 | T22749 | arg1Of | promoter,murine |
| R16370 | T22751 | T22750 | arg1Of | promoter,SerpinB2 |
| R16371 | T22752 | T22742 | arg1Of | and,( |
| R16372 | T22757 | T22752 | arg2Of | constructs,and |
| R16373 | T22757 | T22753 | arg1Of | constructs,5′ |
| R16374 | T22757 | T22754 | arg1Of | constructs,deletion |
| R16375 | T22757 | T22755 | arg1Of | constructs,luciferase |
| R16376 | T22757 | T22756 | arg1Of | constructs,reporter |
| R16377 | T22762 | T22758 | arg1Of | region,The |
| R16378 | T22762 | T22759 | arg1Of | region,murine |
| R16379 | T22762 | T22760 | arg1Of | region,5′ |
| R16380 | T22762 | T22761 | arg1Of | region,flanking |
| R16381 | T22762 | T22763 | arg1Of | region,from |
| R16382 | T22762 | T22767 | arg1Of | region,was |
| R16383 | T22762 | T22768 | arg2Of | region,inserted |
| R16384 | T22764 | T22763 | arg2Of | −4480,from |
| R16385 | T22764 | T22765 | arg1Of | −4480,to |
| R16386 | T22766 | T22765 | arg2Of | +92,to |
| R16387 | T22768 | T22767 | arg2Of | inserted,was |
| R16388 | T22768 | T22769 | arg1Of | inserted,upstream |
| R16389 | T22768 | T22775 | arg1Of | inserted,and |
| R16390 | T22769 | T22770 | arg1Of | upstream,of |
| R16391 | T22774 | T22770 | arg2Of | gene,of |
| R16392 | T22774 | T22771 | arg1Of | gene,the |
| R16393 | T22774 | T22772 | arg1Of | gene,luciferase |
| R16394 | T22774 | T22773 | arg1Of | gene,reporter |
| R16395 | T22777 | T22776 | arg1Of | deletions,5′ |
| R16396 | T22777 | T22778 | arg1Of | deletions,were |
| R16397 | T22777 | T22779 | arg2Of | deletions,generated |
| R16398 | T22779 | T22775 | arg2Of | generated,and |
| R16399 | T22779 | T22778 | arg2Of | generated,were |
| R16400 | T22780 | T22779 | arg3Of | using,generated |
| R16401 | T22780 | T22784 | arg1Of | using,or |
| R16402 | T22780 | T22785 | arg1Of | using,with |
| R16403 | T22783 | T22780 | arg2Of | sites,using |
| R16404 | T22783 | T22781 | arg1Of | sites,restriction |
| R16405 | T22783 | T22782 | arg1Of | sites,enzyme |
| R16406 | T22789 | T22785 | arg2Of | primers,with |
| R16407 | T22789 | T22786 | arg1Of | primers,specific |
| R16408 | T22789 | T22787 | arg1Of | primers,oligonucleotide |
| R16409 | T22789 | T22788 | arg1Of | primers,PCR |
| R16410 | T22791 | T22790 | arg1Of | names,Construct |
| R16411 | T22791 | T22792 | arg1Of | names,indicate |
| R16412 | T22795 | T22794 | arg1Of | 5′,most |
| R16413 | T22796 | T22793 | arg1Of | nucleotide,the |
| R16414 | T22796 | T22795 | arg1Of | nucleotide,5′ |
| R16415 | T22796 | T22797 | arg1Of | nucleotide,of |
| R16416 | T22796 | T22809 | arg1Of | nucleotide,were |
| R16417 | T22796 | T22811 | arg2Of | nucleotide,transfected |
| R16418 | T22804 | T22803 | arg2Of | B,( |
| R16419 | T22805 | T22803 | arg3Of | ),( |
| R16420 | T22808 | T22797 | arg2Of | macrophages,of |
| R16421 | T22808 | T22798 | arg1Of | macrophages,murine |
| R16422 | T22808 | T22799 | arg1Of | macrophages,SerpinB2 |
| R16423 | T22808 | T22800 | arg1Of | macrophages,5′ |
| R16424 | T22808 | T22801 | arg1Of | macrophages,flanking |
| R16425 | T22808 | T22802 | arg1Of | macrophages,sequence. |
| R16426 | T22808 | T22803 | arg1Of | macrophages,( |
| R16427 | T22808 | T22806 | arg1Of | macrophages,RAW |
| R16428 | T22808 | T22807 | arg1Of | macrophages,264.7 |
| R16429 | T22811 | T22792 | arg2Of | transfected,indicate |
| R16430 | T22811 | T22809 | arg2Of | transfected,were |
| R16431 | T22811 | T22810 | arg1Of | transfected,transiently |
| R16432 | T22811 | T22812 | arg1Of | transfected,with |
| R16433 | T22819 | T22814 | arg2Of | constructs,indicated |
| R16434 | T22819 | T22815 | arg1Of | constructs,murine |
| R16435 | T22819 | T22816 | arg1Of | constructs,SerpinB2 |
| R16436 | T22819 | T22817 | arg1Of | constructs,promoter-luciferase |
| R16437 | T22819 | T22818 | arg1Of | constructs,reporter |
| R16438 | T22819 | T22820 | arg1Of | constructs,and |
| R16439 | T22820 | T22812 | arg2Of | and,with |
| R16440 | T22820 | T22813 | arg1Of | and,the |
| R16441 | T22822 | T22820 | arg2Of | plasmids,and |
| R16442 | T22822 | T22821 | arg1Of | plasmids,control |
| R16443 | T22823 | T22824 | arg1Of | Cells,were |
| R16444 | T22823 | T22827 | arg1Of | Cells,untreated |
| R16445 | T22823 | T22829 | arg2Of | Cells,treated |
| R16446 | T22827 | T22825 | arg1Of | untreated,either |
| R16447 | T22827 | T22826 | arg1Of | untreated,left |
| R16448 | T22827 | T22828 | arg1Of | untreated,or |
| R16449 | T22828 | T22824 | arg2Of | or,were |
| R16450 | T22829 | T22828 | arg2Of | treated,or |
| R16451 | T22829 | T22830 | arg1Of | treated,with |
| R16452 | T22831 | T22832 | arg1Of | 100,ng/ml |
| R16453 | T22833 | T22831 | arg1Of | LPS,100 |
| R16454 | T22833 | T22834 | arg1Of | LPS,or |
| R16455 | T22834 | T22830 | arg2Of | or,with |
| R16456 | T22834 | T22838 | arg1Of | or,for |
| R16457 | T22835 | T22836 | arg1Of | 40,ng/ml |
| R16458 | T22837 | T22834 | arg2Of | PMA,or |
| R16459 | T22837 | T22835 | arg1Of | PMA,40 |
| R16460 | T22840 | T22838 | arg2Of | hrs,for |
| R16461 | T22840 | T22839 | arg1Of | hrs,16 |
| R16462 | T22841 | T22842 | arg1Of | Shown,is |
| R16463 | T22848 | T22842 | arg2Of | activity,is |
| R16464 | T22848 | T22843 | arg1Of | activity,the |
| R16465 | T22848 | T22844 | arg1Of | activity,relative |
| R16466 | T22848 | T22845 | arg1Of | activity,luciferase |
| R16467 | T22848 | T22846 | arg1Of | activity,reporter |
| R16468 | T22848 | T22847 | arg1Of | activity,gene |
| R16469 | T22848 | T22849 | arg1Of | activity,following |
| R16470 | T22850 | T22849 | arg2Of | treatment,following |
| R16471 | T22852 | T22851 | arg1Of | results,The |
| R16472 | T22852 | T22853 | arg1Of | results,represent |
| R16473 | T22855 | T22854 | arg1Of | mean,the |
| R16474 | T22855 | T22856 | arg1Of | mean,and |
| R16475 | T22856 | T22853 | arg2Of | and,represent |
| R16476 | T22857 | T22858 | arg1Of | SEM,of |
| R16477 | T22861 | T22858 | arg2Of | experiments.,of |
| R16478 | T22861 | T22859 | arg1Of | experiments.,four |
| R16479 | T22861 | T22860 | arg1Of | experiments.,independent |
| R16480 | T22861 | T22862 | arg1Of | experiments.,( |
| R16481 | T22863 | T22862 | arg2Of | C,( |
| R16482 | T22864 | T22862 | arg3Of | ),( |
| R16483 | T22867 | T22856 | arg2Of | conservation,and |
| R16484 | T22867 | T22857 | arg1Of | conservation,SEM |
| R16485 | T22867 | T22865 | arg1Of | conservation,DNA |
| R16486 | T22867 | T22866 | arg1Of | conservation,sequence |
| R16487 | T22867 | T22868 | arg1Of | conservation,between |
| R16488 | T22870 | T22871 | arg1Of | human,and |
| R16489 | T22872 | T22871 | arg2Of | murine,and |
| R16490 | T22876 | T22868 | arg2Of | regions,between |
| R16491 | T22876 | T22869 | arg1Of | regions,the |
| R16492 | T22876 | T22870 | arg1Of | regions,human |
| R16493 | T22876 | T22872 | arg1Of | regions,murine |
| R16494 | T22876 | T22873 | arg1Of | regions,SerpinB2 |
| R16495 | T22876 | T22874 | arg1Of | regions,5′ |
| R16496 | T22876 | T22875 | arg1Of | regions,flanking |
| R16497 | T22878 | T22877 | arg1Of | representation,Schematic |
| R16498 | T22878 | T22879 | arg1Of | representation,of |
| R16499 | T22878 | T22888 | arg1Of | representation,with |
| R16500 | T22881 | T22882 | arg1Of | human,and |
| R16501 | T22883 | T22882 | arg2Of | murine,and |
| R16502 | T22887 | T22879 | arg2Of | regions,of |
| R16503 | T22887 | T22880 | arg1Of | regions,the |
| R16504 | T22887 | T22881 | arg1Of | regions,human |
| R16505 | T22887 | T22883 | arg1Of | regions,murine |
| R16506 | T22887 | T22884 | arg1Of | regions,SerpinB2 |
| R16507 | T22887 | T22885 | arg1Of | regions,5′ |
| R16508 | T22887 | T22886 | arg1Of | regions,flanking |
| R16509 | T22889 | T22888 | arg2Of | regions,with |
| R16510 | T22889 | T22890 | arg1Of | regions,of |
| R16511 | T22893 | T22890 | arg2Of | identity,of |
| R16512 | T22893 | T22891 | arg1Of | identity,nucleotide |
| R16513 | T22893 | T22892 | arg1Of | identity,sequence |
| R16514 | T22893 | T22894 | arg2Of | identity,indicated |
| R16515 | T22899 | T22894 | arg1Of | boxes,indicated |
| R16516 | T22899 | T22895 | arg2Of | boxes,by |
| R16517 | T22899 | T22896 | arg1Of | boxes,the |
| R16518 | T22899 | T22897 | arg1Of | boxes,same |
| R16519 | T22899 | T22898 | arg2Of | boxes,colored |
| R16520 | T22901 | T22900 | arg1Of | regions,Homologous |
| R16521 | T22901 | T22902 | arg1Of | regions,are |
| R16522 | T22901 | T22903 | arg2Of | regions,interrupted |
| R16523 | T22903 | T22902 | arg2Of | interrupted,are |
| R16524 | T22907 | T22903 | arg1Of | elements,interrupted |
| R16525 | T22907 | T22904 | arg2Of | elements,by |
| R16526 | T22907 | T22905 | arg1Of | elements,repetitive |
| R16527 | T22907 | T22906 | arg1Of | elements,sequence |
| R16528 | T22907 | T22908 | arg1Of | elements,in |
| R16529 | T22912 | T22908 | arg2Of | regions,in |
| R16530 | T22912 | T22909 | arg1Of | regions,both |
| R16531 | T22912 | T22910 | arg1Of | regions,5′ |
| R16532 | T22912 | T22911 | arg1Of | regions,flanking |
| R16533 | T22914 | T22913 | arg1Of | repeat,Alu = Alu |
| R16534 | T22914 | T22915 | arg1Of | repeat,"," |
| R16535 | T22915 | T22925 | arg1Of | ",","," |
| R16536 | T22921 | T22915 | arg2Of | repeat,"," |
| R16537 | T22921 | T22916 | arg1Of | repeat,ID4 = |
| R16538 | T22921 | T22917 | arg1Of | repeat,ID4 |
| R16539 | T22921 | T22918 | arg1Of | repeat,short |
| R16540 | T22921 | T22919 | arg1Of | repeat,interspersed |
| R16541 | T22921 | T22920 | arg1Of | repeat,nuclear |
| R16542 | T22921 | T22922 | arg1Of | repeat,( |
| R16543 | T22923 | T22922 | arg2Of | SINE,( |
| R16544 | T22924 | T22922 | arg3Of | ),( |
| R16545 | T22925 | T22935 | arg1Of | ",","," |
| R16546 | T22929 | T22926 | arg1Of | interspersed,L1 = |
| R16547 | T22929 | T22927 | arg1Of | interspersed,L1 |
| R16548 | T22929 | T22928 | arg1Of | interspersed,long |
| R16549 | T22931 | T22925 | arg2Of | element,"," |
| R16550 | T22931 | T22929 | arg1Of | element,interspersed |
| R16551 | T22931 | T22930 | arg1Of | element,nuclear |
| R16552 | T22931 | T22932 | arg1Of | element,( |
| R16553 | T22933 | T22932 | arg2Of | LINE,( |
| R16554 | T22934 | T22932 | arg3Of | ),( |
| R16555 | T22938 | T22935 | arg2Of | LINE,"," |
| R16556 | T22938 | T22936 | arg1Of | LINE,L2 = |
| R16557 | T22938 | T22937 | arg1Of | LINE,L2 |
| R16558 | T22938 | T22939 | arg1Of | LINE,"," |
| R16559 | T22941 | T22940 | arg1Of | SINE,MIR = MIR |
| R16560 | T22941 | T22942 | arg1Of | SINE,"," |
| R16561 | T22941 | T22950 | arg1Of | SINE,"," |
| R16562 | T22946 | T22942 | arg2Of | repeat,"," |
| R16563 | T22946 | T22943 | arg1Of | repeat,MLT1L = MLT1L |
| R16564 | T22946 | T22944 | arg1Of | repeat,long |
| R16565 | T22946 | T22945 | arg1Of | repeat,terminal |
| R16566 | T22946 | T22947 | arg1Of | repeat,( |
| R16567 | T22948 | T22947 | arg2Of | LTR,( |
| R16568 | T22949 | T22947 | arg3Of | ),( |
| R16569 | T22950 | T22939 | arg2Of | ",","," |
| R16570 | T22950 | T22957 | arg1Of | ",","," |
| R16571 | T22952 | T22951 | arg2Of | TATG,( |
| R16572 | T22953 | T22951 | arg3Of | ),( |
| R16573 | T22956 | T22950 | arg2Of | repeat,"," |
| R16574 | T22956 | T22951 | arg1Of | repeat,( |
| R16575 | T22956 | T22954 | arg1Of | repeat,n = TATG |
| R16576 | T22956 | T22955 | arg1Of | repeat,tetranucleotide |
| R16577 | T22960 | T22957 | arg2Of | site,"," |
| R16578 | T22960 | T22958 | arg1Of | site,tis = transcription |
| R16579 | T22960 | T22959 | arg1Of | site,initiation |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22718 | 1082-1090 | Protein | denotes | SerpinB2 |
| T22717 | 1003-1011 | Protein | denotes | SerpinB2 |
| T22716 | 817-827 | Protein | denotes | luciferase |
| T22715 | 633-670 | Protein | denotes | SerpinB2 promoter-luciferase reporter |
| T22714 | 521-529 | Protein | denotes | SerpinB2 |
| T22713 | 329-339 | Protein | denotes | luciferase |
| T22712 | 186-239 | Protein | denotes | SerpinB2 promoter and 5′ deletion luciferase reporter |
| T22711 | 124-132 | Protein | denotes | SerpinB2 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22985 | 651-661 | http://www.uniprot.org/uniprot/P08659 | denotes | luciferase |
| T22984 | 329-339 | http://www.uniprot.org/uniprot/P08659 | denotes | luciferase |
| T22983 | 220-230 | http://www.uniprot.org/uniprot/P08659 | denotes | luciferase |
| T22982 | 1082-1090 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
| T22981 | 1003-1011 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
| T22980 | 633-641 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
| T22979 | 521-529 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
| T22978 | 186-194 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
| T22977 | 124-132 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
| T22988 | 1314-1317 | http://www.uniprot.org/uniprot/P47928 | denotes | ID4 |
| T22987 | 1307-1310 | http://www.uniprot.org/uniprot/P47928 | denotes | ID4 |
| T22986 | 817-827 | http://www.uniprot.org/uniprot/P08659 | denotes | luciferase |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22719 | 1529-1542 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22699 | 1289-1559 | Sentence | denotes | Alu = Alu repeat, ID4 = ID4 short interspersed nuclear repeat (SINE), L1 = L1 long interspersed nuclear element (LINE), L2 = L2 LINE, MIR = MIR SINE, MLT1L = MLT1L long terminal repeat (LTR), (TATG)n = TATG tetranucleotide repeat, tis = transcription initiation site. |
| T22698 | 1193-1288 | Sentence | denotes | Homologous regions are interrupted by repetitive sequence elements in both 5′ flanking regions. |
| T22697 | 1033-1192 | Sentence | denotes | Schematic representation of the human and murine SerpinB2 5′ flanking regions with regions of nucleotide sequence identity indicated by the same colored boxes. |
| T22696 | 872-1032 | Sentence | denotes | The results represent the mean and SEM of four independent experiments. (C) DNA sequence conservation between the human and murine SerpinB2 5′ flanking regions. |
| T22695 | 795-871 | Sentence | denotes | Shown is the relative luciferase reporter gene activity following treatment. |
| T22694 | 704-794 | Sentence | denotes | Cells were either left untreated or treated with 100 ng/ml LPS or 40 ng/ml PMA for 16 hrs. |
| T22693 | 463-703 | Sentence | denotes | Construct names indicate the most 5′ nucleotide of murine SerpinB2 5′ flanking sequence. (B) RAW 264.7 macrophages were transiently transfected with the indicated murine SerpinB2 promoter-luciferase reporter constructs and control plasmids. |
| T22692 | 252-462 | Sentence | denotes | The murine 5′ flanking region from −4480 to +92 was inserted upstream of the luciferase reporter gene and 5′ deletions were generated using restriction enzyme sites or with specific oligonucleotide PCR primers. |
| T22691 | 143-251 | Sentence | denotes | (A) Schematic representation of the murine SerpinB2 promoter and 5′ deletion luciferase reporter constructs. |
| T22690 | 44-142 | Sentence | denotes | Deletion reporter gene analysis of LPS and PMA-responsive regions in the murine SerpinB2 promoter. |
| T130 | 0-142 | Sentence | denotes | 10.1371/journal.pone.0057855.g002 Figure 2 Deletion reporter gene analysis of LPS and PMA-responsive regions in the murine SerpinB2 promoter. |
| T131 | 143-251 | Sentence | denotes | (A) Schematic representation of the murine SerpinB2 promoter and 5′ deletion luciferase reporter constructs. |
| T132 | 252-462 | Sentence | denotes | The murine 5′ flanking region from −4480 to +92 was inserted upstream of the luciferase reporter gene and 5′ deletions were generated using restriction enzyme sites or with specific oligonucleotide PCR primers. |
| T133 | 463-703 | Sentence | denotes | Construct names indicate the most 5′ nucleotide of murine SerpinB2 5′ flanking sequence. (B) RAW 264.7 macrophages were transiently transfected with the indicated murine SerpinB2 promoter-luciferase reporter constructs and control plasmids. |
| T134 | 704-794 | Sentence | denotes | Cells were either left untreated or treated with 100 ng/ml LPS or 40 ng/ml PMA for 16 hrs. |
| T135 | 795-871 | Sentence | denotes | Shown is the relative luciferase reporter gene activity following treatment. |
| T136 | 872-1032 | Sentence | denotes | The results represent the mean and SEM of four independent experiments. (C) DNA sequence conservation between the human and murine SerpinB2 5′ flanking regions. |
| T137 | 1033-1192 | Sentence | denotes | Schematic representation of the human and murine SerpinB2 5′ flanking regions with regions of nucleotide sequence identity indicated by the same colored boxes. |
| T138 | 1193-1288 | Sentence | denotes | Homologous regions are interrupted by repetitive sequence elements in both 5′ flanking regions. |
| T139 | 1289-1559 | Sentence | denotes | Alu = Alu repeat, ID4 = ID4 short interspersed nuclear repeat (SINE), L1 = L1 long interspersed nuclear element (LINE), L2 = L2 LINE, MIR = MIR SINE, MLT1L = MLT1L long terminal repeat (LTR), (TATG)n = TATG tetranucleotide repeat, tis = transcription initiation site. |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22727 | 1082-1090 | Protein | denotes | SerpinB2 |
| T22726 | 1003-1011 | Protein | denotes | SerpinB2 |
| T22725 | 817-827 | Protein | denotes | luciferase |
| T22724 | 633-670 | Protein | denotes | SerpinB2 promoter-luciferase reporter |
| T22723 | 521-529 | Protein | denotes | SerpinB2 |
| T22722 | 329-339 | Protein | denotes | luciferase |
| T22721 | 186-239 | Protein | denotes | SerpinB2 promoter and 5′ deletion luciferase reporter |
| T22720 | 124-132 | Protein | denotes | SerpinB2 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22976 | 1082-1090 | Protein | denotes | SerpinB2 |
| T22975 | 1003-1011 | Protein | denotes | SerpinB2 |
| T22974 | 817-827 | Protein | denotes | luciferase |
| T22973 | 633-670 | Protein | denotes | SerpinB2 promoter-luciferase reporter |
| T22972 | 521-529 | Protein | denotes | SerpinB2 |
| T22971 | 329-339 | Protein | denotes | luciferase |
| T22970 | 186-239 | Protein | denotes | SerpinB2 promoter and 5′ deletion luciferase reporter |
| T22969 | 124-132 | Protein | denotes | SerpinB2 |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23014 | 595-606 | Gene_expression | denotes | transfected |
| T23013 | 1082-1090 | Protein | denotes | SerpinB2 |
| T23012 | 1003-1011 | Protein | denotes | SerpinB2 |
| T23011 | 817-827 | Protein | denotes | luciferase |
| T23010 | 633-670 | Protein | denotes | SerpinB2 promoter-luciferase reporter |
| T23009 | 521-529 | Protein | denotes | SerpinB2 |
| T23008 | 329-339 | Protein | denotes | luciferase |
| T23007 | 186-239 | Protein | denotes | SerpinB2 promoter and 5′ deletion luciferase reporter |
| T23006 | 124-132 | Protein | denotes | SerpinB2 |
| R16581 | T23010 | T23014 | themeOf | SerpinB2 promoter-luciferase reporter,transfected |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22993 | 633-670 | Protein | denotes | SerpinB2 promoter-luciferase reporter |
| T22992 | 521-529 | Protein | denotes | SerpinB2 |
| T22991 | 329-339 | Protein | denotes | luciferase |
| T22990 | 186-239 | Protein | denotes | SerpinB2 promoter and 5′ deletion luciferase reporter |
| T22989 | 124-132 | Protein | denotes | SerpinB2 |
| T22997 | 595-606 | Gene_expression | denotes | transfected |
| T22996 | 1082-1090 | Protein | denotes | SerpinB2 |
| T22995 | 1003-1011 | Protein | denotes | SerpinB2 |
| T22994 | 817-827 | Protein | denotes | luciferase |
| R16580 | T22993 | T22997 | themeOf | SerpinB2 promoter-luciferase reporter,transfected |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23057 | 1426-1430 | Protein | denotes | MIR |
| T23056 | 62-66 | Protein | denotes | gene |
| T23055 | 488-550 | Entity | denotes | the most 5′ nucleotide of murine SerpinB2 5′ flanking sequence |
| T23054 | 1307-1311 | Protein | denotes | ID4 |
| T23053 | 1490-1492 | Entity | denotes | n |
| T23092 | 1499-1504 | Entity | denotes | tetra |
| T23091 | 79-82 | Entity | denotes | LPS |
| T23090 | 1360-1368 | Protein | denotes | L1 = L1 |
| T23089 | 1411-1414 | Entity | denotes | L2 |
| T23088 | 325-353 | Protein | denotes | the luciferase reporter gene |
| T23087 | 1075-1090 | Protein | denotes | murine SerpinB2 |
| T23086 | 1003-1011 | Protein | denotes | SerpinB2 |
| T23085 | 1417-1419 | Entity | denotes | L2 |
| T23084 | 392-416 | Entity | denotes | restriction enzyme sites |
| T23083 | 186-239 | Protein | denotes | SerpinB2 promoter and 5′ deletion luciferase reporter |
| T23082 | 450-453 | Protein | denotes | PCR |
| T23081 | 124-132 | Protein | denotes | SerpinB2 |
| T23080 | 722-766 | Entity | denotes | left untreated or treated with 100 ng/ml LPS |
| T23079 | 1360-1363 | Protein | denotes | L1 |
| T23078 | 1307-1323 | Protein | denotes | ID4 = ID4 short |
| T23077 | 1432-1435 | Protein | denotes | MIR |
| T23076 | 521-529 | Protein | denotes | SerpinB2 |
| T23075 | 425-461 | Entity | denotes | specific oligonucleotide PCR primers |
| T23074 | 556-577 | Entity | denotes | RAW 264.7 macrophages |
| T23073 | 329-339 | Protein | denotes | luciferase |
| T23072 | 1523-1527 | Entity | denotes | tis |
| T23071 | 113-141 | Entity | denotes | the murine SerpinB2 promoter |
| T23070 | 626-661 | Protein | denotes | murine SerpinB2 promoter-luciferase |
| T23069 | 392-410 | Protein | denotes | restriction enzyme |
| T23068 | 837-841 | Protein | denotes | gene |
| T23067 | 1499-1514 | Entity | denotes | tetranucleotide |
| T23066 | 773-793 | Entity | denotes | ng/ml PMA for 16 hrs |
| T23065 | 1127-1137 | Entity | denotes | nucleotide |
| T23064 | 633-641 | Protein | denotes | SerpinB2 |
| T23063 | 948-951 | Entity | denotes | DNA |
| T23062 | 704-709 | Entity | denotes | Cells |
| T23061 | 626-661 | Entity | denotes | murine SerpinB2 promoter-luciferase |
| T23060 | 1166-1191 | Entity | denotes | by the same colored boxes |
| T23059 | 817-827 | Protein | denotes | luciferase |
| T23058 | 787-793 | Protein | denotes | 16 hrs |
| R16590 | T23061 | T23070 | partOf | murine SerpinB2 promoter-luciferase,murine SerpinB2 promoter-luciferase |
| R16591 | T23071 | T23081 | partOf | the murine SerpinB2 promoter,SerpinB2 |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23033 | 1311-1312 | Positive_regulation | denotes | = |
| T23032 | 1311-1312 | Positive_regulation | denotes | = |
| T23031 | 1318-1351 | Protein | denotes | short interspersed nuclear repeat |
| T23030 | 1442-1476 | Protein | denotes | MLT1L = MLT1L long terminal repeat |
| T23029 | 1436-1440 | Protein | denotes | SINE |
| T23028 | 1366-1368 | Protein | denotes | L1 |
| T23027 | 1360-1362 | Protein | denotes | L1 |
| T23026 | 1314-1317 | Protein | denotes | ID4 |
| T23025 | 1307-1310 | Protein | denotes | ID4 |
| T23024 | 1289-1292 | Protein | denotes | Alu |
| T23023 | 817-827 | Protein | denotes | luciferase |
| T23022 | 651-661 | Protein | denotes | luciferase |
| T23021 | 626-650 | Protein | denotes | murine SerpinB2 promoter |
| T23020 | 329-339 | Protein | denotes | luciferase |
| T23019 | 157-171 | Gene_expression | denotes | representation |
| T23018 | 157-171 | Gene_expression | denotes | representation |
| T23017 | 220-250 | Protein | denotes | luciferase reporter constructs |
| T23016 | 179-203 | Protein | denotes | murine SerpinB2 promoter |
| T23015 | 117-141 | Protein | denotes | murine SerpinB2 promoter |
| R16582 | T23016 | T23018 | themeOf | murine SerpinB2 promoter,representation |
| R16583 | T23017 | T23019 | themeOf | luciferase reporter constructs,representation |
| R16584 | T23030 | T23032 | themeOf | MLT1L = MLT1L long terminal repeat,= |
| R16585 | T23031 | T23033 | themeOf | short interspersed nuclear repeat,= |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22673 | 1082-1090 | Protein | denotes | SerpinB2 |
| T22672 | 1003-1011 | Protein | denotes | SerpinB2 |
| T22671 | 817-827 | Protein | denotes | luciferase |
| T22670 | 633-670 | Protein | denotes | SerpinB2 promoter-luciferase reporter |
| T22669 | 521-529 | Protein | denotes | SerpinB2 |
| T22668 | 329-339 | Protein | denotes | luciferase |
| T22667 | 186-239 | Protein | denotes | SerpinB2 promoter and 5′ deletion luciferase reporter |
| T22666 | 124-132 | Protein | denotes | SerpinB2 |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22689 | 1082-1090 | Protein | denotes | SerpinB2 |
| T22688 | 1003-1011 | Protein | denotes | SerpinB2 |
| T22687 | 817-827 | Protein | denotes | luciferase |
| T22686 | 633-670 | Protein | denotes | SerpinB2 promoter-luciferase reporter |
| T22685 | 521-529 | Protein | denotes | SerpinB2 |
| T22684 | 329-339 | Protein | denotes | luciferase |
| T22683 | 186-239 | Protein | denotes | SerpinB2 promoter and 5′ deletion luciferase reporter |
| T22682 | 124-132 | Protein | denotes | SerpinB2 |
| T22681 | 1082-1090 | Protein | denotes | SerpinB2 |
| T22680 | 1003-1011 | Protein | denotes | SerpinB2 |
| T22679 | 817-827 | Protein | denotes | luciferase |
| T22678 | 633-670 | Protein | denotes | SerpinB2 promoter-luciferase reporter |
| T22677 | 521-529 | Protein | denotes | SerpinB2 |
| T22676 | 329-339 | Protein | denotes | luciferase |
| T22675 | 186-239 | Protein | denotes | SerpinB2 promoter and 5′ deletion luciferase reporter |
| T22674 | 124-132 | Protein | denotes | SerpinB2 |