PMC:3589482 / 17980-18125
Annnotations
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9415 | 144-145 | . | denotes | . |
T9414 | 143-144 | -RRB- | denotes | ) |
T9413 | 142-143 | LS | denotes | 1 |
T9412 | 137-141 | FW | denotes | Fig. |
T9411 | 136-137 | -LRB- | denotes | ( |
T9410 | 126-135 | NN | denotes | treatment |
T9409 | 122-125 | NNP | denotes | LPS |
T9408 | 119-121 | IN | denotes | of |
T9407 | 115-118 | NNS | denotes | hrs |
T9406 | 113-114 | CD | denotes | 8 |
T9405 | 107-112 | IN | denotes | after |
T9404 | 96-106 | JJ | denotes | detectable |
T9403 | 92-95 | CC | denotes | and |
T9402 | 90-91 | , | denotes | , |
T9401 | 89-90 | NNP | denotes | ] |
T9400 | 87-89 | CD | denotes | 31 |
T9399 | 86-87 | NNP | denotes | [ |
T9398 | 80-85 | NNS | denotes | types |
T9397 | 75-79 | NN | denotes | cell |
T9396 | 69-74 | JJ | denotes | other |
T9395 | 66-68 | IN | denotes | in |
T9394 | 57-65 | VBN | denotes | reported |
T9393 | 52-56 | VBN | denotes | been |
T9392 | 48-51 | VBZ | denotes | has |
T9391 | 45-47 | IN | denotes | as |
T9390 | 37-44 | VBN | denotes | induced |
T9389 | 32-36 | RB | denotes | also |
T9388 | 28-31 | VBD | denotes | was |
T9387 | 17-27 | NN | denotes | expression |
T9386 | 9-16 | NN | denotes | protein |
T9385 | 0-8 | CD | denotes | SerpinB2 |
R6887 | T9385 | T9387 | nummod | SerpinB2,expression |
R6888 | T9386 | T9387 | compound | protein,expression |
R6889 | T9387 | T9390 | nsubjpass | expression,induced |
R6890 | T9388 | T9390 | auxpass | was,induced |
R6891 | T9389 | T9390 | advmod | also,induced |
R6892 | T9390 | T9390 | ROOT | induced,induced |
R6893 | T9391 | T9394 | mark | as,reported |
R6894 | T9392 | T9394 | aux | has,reported |
R6895 | T9393 | T9394 | auxpass | been,reported |
R6896 | T9394 | T9390 | advcl | reported,induced |
R6897 | T9395 | T9394 | prep | in,reported |
R6898 | T9396 | T9398 | amod | other,types |
R6899 | T9397 | T9398 | compound | cell,types |
R6900 | T9398 | T9395 | pobj | types,in |
R6901 | T9399 | T9401 | nmod | [,] |
R6902 | T9400 | T9401 | nummod | 31,] |
R6903 | T9401 | T9394 | dobj | ],reported |
R6904 | T9402 | T9401 | punct | ",",] |
R6905 | T9403 | T9401 | cc | and,] |
R6906 | T9404 | T9405 | amod | detectable,after |
R6907 | T9405 | T9394 | prep | after,reported |
R6908 | T9406 | T9407 | nummod | 8,hrs |
R6909 | T9407 | T9405 | pobj | hrs,after |
R6910 | T9408 | T9407 | prep | of,hrs |
R6911 | T9409 | T9410 | compound | LPS,treatment |
R6912 | T9410 | T9408 | pobj | treatment,of |
R6913 | T9411 | T9413 | punct | (,1 |
R6914 | T9412 | T9413 | nmod | Fig.,1 |
R6915 | T9413 | T9407 | dep | 1,hrs |
R6916 | T9414 | T9413 | punct | ),1 |
R6917 | T9415 | T9390 | punct | .,induced |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9180 | 143-144 | -RRB- | denotes | ) |
T9179 | 142-143 | CD | denotes | 1 |
T9178 | 137-141 | NN | denotes | Fig. |
T9177 | 136-137 | -LRB- | denotes | ( |
T9176 | 126-135 | NN | denotes | treatment |
T9175 | 122-125 | NN | denotes | LPS |
T9174 | 119-121 | IN | denotes | of |
T9173 | 115-118 | NN | denotes | hrs |
T9172 | 113-114 | CD | denotes | 8 |
T9171 | 107-112 | IN | denotes | after |
T9170 | 96-106 | JJ | denotes | detectable |
T9169 | 92-95 | CC | denotes | and |
T9168 | 90-91 | -COMMA- | denotes | , |
T9167 | 89-90 | -RRB- | denotes | ] |
T9166 | 87-89 | CD | denotes | 31 |
T9165 | 86-87 | -LRB- | denotes | [ |
T9164 | 80-85 | NN | denotes | types |
T9163 | 75-79 | NN | denotes | cell |
T9162 | 69-74 | JJ | denotes | other |
T9161 | 66-68 | IN | denotes | in |
T9160 | 57-65 | VB | denotes | reported |
T9159 | 52-56 | VB | denotes | been |
T9158 | 48-51 | VB | denotes | has |
T9157 | 45-47 | IN | denotes | as |
T9156 | 37-44 | VB | denotes | induced |
T9155 | 32-36 | RB | denotes | also |
T9154 | 28-31 | VB | denotes | was |
T9153 | 17-27 | NN | denotes | expression |
T9152 | 9-16 | NN | denotes | protein |
T9151 | 0-8 | NN | denotes | SerpinB2 |
R6709 | T9153 | T9151 | arg1Of | expression,SerpinB2 |
R6710 | T9153 | T9152 | arg1Of | expression,protein |
R6711 | T9153 | T9154 | arg1Of | expression,was |
R6712 | T9153 | T9156 | arg2Of | expression,induced |
R6713 | T9153 | T9170 | arg1Of | expression,detectable |
R6714 | T9156 | T9157 | arg1Of | induced,as |
R6715 | T9156 | T9169 | arg1Of | induced,and |
R6716 | T9160 | T9157 | arg2Of | reported,as |
R6717 | T9160 | T9158 | arg2Of | reported,has |
R6718 | T9160 | T9159 | arg2Of | reported,been |
R6719 | T9160 | T9161 | arg1Of | reported,in |
R6720 | T9164 | T9161 | arg2Of | types,in |
R6721 | T9164 | T9162 | arg1Of | types,other |
R6722 | T9164 | T9163 | arg1Of | types,cell |
R6723 | T9164 | T9165 | arg1Of | types,[ |
R6724 | T9166 | T9165 | arg2Of | 31,[ |
R6725 | T9167 | T9165 | arg3Of | ],[ |
R6726 | T9169 | T9154 | arg2Of | and,was |
R6727 | T9169 | T9155 | arg1Of | and,also |
R6728 | T9169 | T9168 | arg1Of | and,"," |
R6729 | T9169 | T9171 | arg1Of | and,after |
R6730 | T9170 | T9169 | arg2Of | detectable,and |
R6731 | T9173 | T9171 | arg2Of | hrs,after |
R6732 | T9173 | T9172 | arg1Of | hrs,8 |
R6733 | T9173 | T9174 | arg1Of | hrs,of |
R6734 | T9176 | T9174 | arg2Of | treatment,of |
R6735 | T9176 | T9175 | arg1Of | treatment,LPS |
R6736 | T9176 | T9177 | arg1Of | treatment,( |
R6737 | T9178 | T9177 | arg2Of | Fig.,( |
R6738 | T9178 | T9179 | arg1Of | Fig.,1 |
R6739 | T9180 | T9177 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9037 | 0-8 | Protein | denotes | SerpinB2 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9198 | 0-8 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9041 | 75-79 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9017 | 0-145 | Sentence | denotes | SerpinB2 protein expression was also induced as has been reported in other cell types [31], and detectable after 8 hrs of LPS treatment (Fig. 1). |
T117 | 0-145 | Sentence | denotes | SerpinB2 protein expression was also induced as has been reported in other cell types [31], and detectable after 8 hrs of LPS treatment (Fig. 1). |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9051 | 0-8 | Protein | denotes | SerpinB2 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9193 | 37-44 | Positive_regulation | denotes | induced |
T9192 | 17-27 | Gene_expression | denotes | expression |
T9185 | 0-8 | Protein | denotes | SerpinB2 |
R6743 | T9185 | T9192 | themeOf | SerpinB2,expression |
R6747 | T9192 | T9193 | themeOf | expression,induced |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9232 | 37-44 | Positive_regulation | denotes | induced |
T9231 | 17-27 | Gene_expression | denotes | expression |
T9225 | 0-8 | Protein | denotes | SerpinB2 |
R6762 | T9225 | T9231 | themeOf | SerpinB2,expression |
R6766 | T9231 | T9232 | themeOf | expression,induced |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9212 | 37-44 | Positive_regulation | denotes | induced |
T9211 | 17-27 | Gene_expression | denotes | expression |
T9203 | 0-8 | Protein | denotes | SerpinB2 |
R6752 | T9203 | T9211 | themeOf | SerpinB2,expression |
R6756 | T9211 | T9212 | themeOf | expression,induced |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9273 | 0-8 | Protein | denotes | SerpinB2 |
T9268 | 69-91 | Entity | denotes | other cell types [31], |
T9267 | 0-47 | Protein | denotes | SerpinB2 protein expression was also induced as |
T9266 | 122-125 | Entity | denotes | LPS |
T9264 | 96-144 | Protein | denotes | detectable after 8 hrs of LPS treatment (Fig. 1) |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9244 | 37-44 | Positive_regulation | denotes | induced |
T9243 | 17-27 | Gene_expression | denotes | expression |
T9242 | 0-16 | Protein | denotes | SerpinB2 protein |
R6772 | T9242 | T9243 | themeOf | SerpinB2 protein,expression |
R6773 | T9243 | T9244 | themeOf | expression,induced |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8993 | 17-27 | Gene_expression | denotes | expression |
T8987 | 0-8 | Protein | denotes | SerpinB2 |
R6589 | T8987 | T8993 | themeOf | SerpinB2,expression |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9011 | 37-44 | Positive_regulation | denotes | induced |
T9010 | 17-27 | Gene_expression | denotes | expression |
T9009 | 0-8 | Protein | denotes | SerpinB2 |
T8998 | 0-8 | Protein | denotes | SerpinB2 |
R6597 | T9009 | T9010 | themeOf | SerpinB2,expression |
R6598 | T9010 | T9011 | themeOf | expression,induced |