PMC:3589482 / 142-333
Annnotations
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T804 | 177-183 | NN | denotes | innate |
| T803 | 174-176 | IN | denotes | of |
| T802 | 163-173 | NN | denotes | modulation |
| T801 | 159-162 | DT | denotes | the |
| T800 | 156-158 | TO | denotes | to |
| T799 | 149-155 | VBN | denotes | linked |
| T798 | 146-148 | VBZ | denotes | is |
| T797 | 142-145 | CC | denotes | and |
| T796 | 134-141 | NNS | denotes | stimuli |
| T795 | 121-133 | JJ | denotes | inflammatory |
| T794 | 118-120 | TO | denotes | to |
| T793 | 109-117 | NN | denotes | response |
| T792 | 106-108 | IN | denotes | in |
| T791 | 94-105 | NNS | denotes | macrophages |
| T790 | 91-93 | IN | denotes | in |
| T789 | 83-90 | VBN | denotes | induced |
| T788 | 76-82 | RB | denotes | highly |
| T787 | 73-75 | VBZ | denotes | is |
| T786 | 71-72 | -RRB- | denotes | ) |
| T785 | 66-71 | NN | denotes | PAI-2 |
| T784 | 65-66 | -LRB- | denotes | ( |
| T783 | 63-64 | CD | denotes | 2 |
| T782 | 58-62 | NN | denotes | type |
| T781 | 48-57 | NN | denotes | inhibitor |
| T780 | 38-47 | NN | denotes | activator |
| T779 | 26-37 | NN | denotes | plasminogen |
| T778 | 23-25 | CC | denotes | or |
| T777 | 14-22 | NNP | denotes | SerpinB2 |
| R365 | T778 | T777 | cc | or,SerpinB2 |
| R367 | T780 | T781 | amod | activator,inhibitor |
| R368 | T781 | T782 | compound | inhibitor,type |
| R370 | T783 | T782 | nummod | 2,type |
| R371 | T784 | T782 | punct | (,type |
| R372 | T785 | T782 | appos | PAI-2,type |
| R373 | T786 | T782 | punct | ),type |
| R374 | T787 | T789 | auxpass | is,induced |
| R375 | T788 | T789 | advmod | highly,induced |
| R376 | T789 | T789 | ROOT | induced,induced |
| R377 | T790 | T789 | prep | in,induced |
| R378 | T791 | T790 | pobj | macrophages,in |
| R379 | T792 | T789 | prep | in,induced |
| R380 | T793 | T792 | pobj | response,in |
| R381 | T794 | T793 | prep | to,response |
| R382 | T795 | T796 | amod | inflammatory,stimuli |
| R383 | T796 | T794 | pobj | stimuli,to |
| R384 | T797 | T789 | cc | and,induced |
| R385 | T798 | T799 | auxpass | is,linked |
| R386 | T799 | T789 | conj | linked,induced |
| R387 | T800 | T799 | prep | to,linked |
| R388 | T801 | T802 | det | the,modulation |
| R389 | T802 | T800 | pobj | modulation,to |
| R390 | T803 | T802 | prep | of,modulation |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T267 | 174-176 | IN | denotes | of |
| T266 | 163-173 | NN | denotes | modulation |
| T265 | 159-162 | DT | denotes | the |
| T264 | 156-158 | TO | denotes | to |
| T263 | 149-155 | VB | denotes | linked |
| T262 | 146-148 | VB | denotes | is |
| T261 | 142-145 | CC | denotes | and |
| T260 | 134-141 | NN | denotes | stimuli |
| T259 | 121-133 | JJ | denotes | inflammatory |
| T258 | 118-120 | TO | denotes | to |
| T257 | 109-117 | NN | denotes | response |
| T256 | 106-108 | IN | denotes | in |
| T255 | 94-105 | NN | denotes | macrophages |
| T254 | 91-93 | IN | denotes | in |
| T253 | 83-90 | VB | denotes | induced |
| T252 | 76-82 | RB | denotes | highly |
| T251 | 73-75 | VB | denotes | is |
| T250 | 71-72 | -RRB- | denotes | ) |
| T249 | 66-71 | NN | denotes | PAI-2 |
| T248 | 65-66 | -LRB- | denotes | ( |
| T247 | 63-64 | CD | denotes | 2 |
| T246 | 58-62 | NN | denotes | type |
| T245 | 48-57 | NN | denotes | inhibitor |
| T244 | 38-47 | NN | denotes | activator |
| T243 | 26-37 | NN | denotes | plasminogen |
| T242 | 23-25 | CC | denotes | or |
| T241 | 14-22 | NN | denotes | SerpinB2 |
| T268 | 177-183 | JJ | denotes | innate |
| R49 | T241 | T242 | arg1Of | SerpinB2,or |
| R50 | T243 | T242 | arg2Of | plasminogen,or |
| R51 | T246 | T241 | arg1Of | type,SerpinB2 |
| R52 | T246 | T243 | arg1Of | type,plasminogen |
| R53 | T246 | T244 | arg1Of | type,activator |
| R54 | T246 | T245 | arg1Of | type,inhibitor |
| R55 | T246 | T247 | arg1Of | type,2 |
| R56 | T246 | T248 | arg1Of | type,( |
| R57 | T246 | T251 | arg1Of | type,is |
| R58 | T246 | T253 | arg2Of | type,induced |
| R59 | T246 | T262 | arg1Of | type,is |
| R60 | T246 | T263 | arg2Of | type,linked |
| R61 | T249 | T248 | arg2Of | PAI-2,( |
| R62 | T250 | T248 | arg3Of | ),( |
| R63 | T253 | T251 | arg2Of | induced,is |
| R64 | T253 | T252 | arg1Of | induced,highly |
| R65 | T253 | T254 | arg1Of | induced,in |
| R66 | T253 | T256 | arg1Of | induced,in |
| R67 | T253 | T261 | arg1Of | induced,and |
| R68 | T255 | T254 | arg2Of | macrophages,in |
| R69 | T257 | T256 | arg2Of | response,in |
| R70 | T257 | T258 | arg1Of | response,to |
| R71 | T260 | T258 | arg2Of | stimuli,to |
| R72 | T260 | T259 | arg1Of | stimuli,inflammatory |
| R73 | T263 | T261 | arg2Of | linked,and |
| R74 | T263 | T262 | arg2Of | linked,is |
| R75 | T263 | T264 | arg1Of | linked,to |
| R76 | T266 | T264 | arg2Of | modulation,to |
| R77 | T266 | T265 | arg1Of | modulation,the |
| R78 | T266 | T267 | arg1Of | modulation,of |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T159 | 14-22 | Protein | denotes | SerpinB2 |
| T160 | 26-64 | Protein | denotes | plasminogen activator inhibitor type 2 |
| T161 | 66-71 | Protein | denotes | PAI-2 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T530 | 14-22 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
| T537 | 63-69 | http://www.uniprot.org/uniprot/P05120 | denotes | 2 (PAI |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T180 | 109-133 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | response to inflammatory |
| T178 | 26-47 | http://purl.obolibrary.org/obo/GO_0031639 | denotes | plasminogen activator |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 5-13 | Sentence | denotes | Abstract |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T212 | 14-22 | Protein | denotes | SerpinB2 |
| T213 | 26-64 | Protein | denotes | plasminogen activator inhibitor type 2 |
| T214 | 66-71 | Protein | denotes | PAI-2 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T512 | 83-90 | Positive_regulation | denotes | induced |
| T493 | 14-22 | Protein | denotes | SerpinB2 |
| T494 | 26-64 | Protein | denotes | plasminogen activator inhibitor type 2 |
| T495 | 66-71 | Protein | denotes | PAI-2 |
| R677 | T493 | T512 | themeOf | SerpinB2,induced |
| R678 | T494 | T512 | themeOf | plasminogen activator inhibitor type 2,induced |
| R679 | T495 | T512 | themeOf | PAI-2,induced |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T603 | 14-22 | Protein | denotes | SerpinB2 |
| T604 | 26-64 | Protein | denotes | plasminogen activator inhibitor type 2 |
| T605 | 66-71 | Protein | denotes | PAI-2 |
| T622 | 83-90 | Positive_regulation | denotes | induced |
| R717 | T604 | T622 | themeOf | plasminogen activator inhibitor type 2,induced |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T569 | 14-22 | Protein | denotes | SerpinB2 |
| T570 | 26-64 | Protein | denotes | plasminogen activator inhibitor type 2 |
| T571 | 66-71 | Protein | denotes | PAI-2 |
| T589 | 83-90 | Positive_regulation | denotes | induced |
| R684 | T570 | T589 | themeOf | plasminogen activator inhibitor type 2,induced |
| R683 | T569 | T589 | themeOf | SerpinB2,induced |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T723 | 94-105 | Entity | denotes | macrophages |
| T739 | 66-71 | Protein | denotes | PAI-2 |
| T740 | 14-72 | Protein | denotes | SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) |
| T744 | 26-72 | Protein | denotes | plasminogen activator inhibitor type 2 (PAI-2) |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T643 | 83-90 | Positive_regulation | denotes | induced |
| T642 | 83-90 | Positive_regulation | denotes | induced |
| T640 | 66-71 | Protein | denotes | PAI-2 |
| T639 | 26-64 | Protein | denotes | plasminogen activator inhibitor type 2 |
| R322 | T640 | T643 | themeOf | PAI-2,induced |
| R706 | T639 | T642 | themeOf | plasminogen activator inhibitor type 2,induced |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T24 | 66-71 | Protein | denotes | PAI-2 |
| T23 | 26-64 | Protein | denotes | plasminogen activator inhibitor type 2 |
| T22 | 14-22 | Protein | denotes | SerpinB2 |
| R1 | T24 | T23 | equivalentTo | PAI-2,plasminogen activator inhibitor type 2 |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T73 | 83-90 | Positive_regulation | denotes | induced |
| T72 | 66-71 | Protein | denotes | PAI-2 |
| T71 | 26-64 | Protein | denotes | plasminogen activator inhibitor type 2 |
| T70 | 14-22 | Protein | denotes | SerpinB2 |
| T53 | 66-71 | Protein | denotes | PAI-2 |
| T52 | 26-64 | Protein | denotes | plasminogen activator inhibitor type 2 |
| T51 | 14-22 | Protein | denotes | SerpinB2 |
| R15 | T71 | T73 | themeOf | plasminogen activator inhibitor type 2,induced |
| R16 | T72 | T71 | equivalentTo | PAI-2,plasminogen activator inhibitor type 2 |