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PMC:3589482 / 126-348 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T807 210-220 NN denotes macrophage
T806 208-209 , denotes ,
T805 200-208 NN denotes immunity
T804 193-199 NN denotes innate
T803 190-192 IN denotes of
T802 179-189 NN denotes modulation
T801 175-178 DT denotes the
T800 172-174 TO denotes to
T799 165-171 VBN denotes linked
T798 162-164 VBZ denotes is
T797 158-161 CC denotes and
T796 150-157 NNS denotes stimuli
T795 137-149 JJ denotes inflammatory
T794 134-136 TO denotes to
T793 125-133 NN denotes response
T792 122-124 IN denotes in
T791 110-121 NNS denotes macrophages
T790 107-109 IN denotes in
T789 99-106 VBN denotes induced
T788 92-98 RB denotes highly
T787 89-91 VBZ denotes is
T786 87-88 -RRB- denotes )
T785 82-87 NN denotes PAI-2
T784 81-82 -LRB- denotes (
T783 79-80 CD denotes 2
T782 74-78 NN denotes type
T781 64-73 NN denotes inhibitor
T780 54-63 NN denotes activator
T779 42-53 NN denotes plasminogen
T778 39-41 CC denotes or
T777 30-38 NNP denotes SerpinB2
R365 T778 T777 cc or,SerpinB2
R367 T780 T781 amod activator,inhibitor
R368 T781 T782 compound inhibitor,type
R370 T783 T782 nummod 2,type
R371 T784 T782 punct (,type
R372 T785 T782 appos PAI-2,type
R373 T786 T782 punct ),type
R374 T787 T789 auxpass is,induced
R375 T788 T789 advmod highly,induced
R376 T789 T789 ROOT induced,induced
R377 T790 T789 prep in,induced
R378 T791 T790 pobj macrophages,in
R379 T792 T789 prep in,induced
R380 T793 T792 pobj response,in
R381 T794 T793 prep to,response
R382 T795 T796 amod inflammatory,stimuli
R383 T796 T794 pobj stimuli,to
R384 T797 T789 cc and,induced
R385 T798 T799 auxpass is,linked
R386 T799 T789 conj linked,induced
R387 T800 T799 prep to,linked
R388 T801 T802 det the,modulation
R389 T802 T800 pobj modulation,to
R390 T803 T802 prep of,modulation
R391 T804 T805 amod innate,immunity
R392 T805 T803 pobj immunity,of
R393 T806 T802 punct ",",modulation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T267 190-192 IN denotes of
T266 179-189 NN denotes modulation
T265 175-178 DT denotes the
T264 172-174 TO denotes to
T263 165-171 VB denotes linked
T262 162-164 VB denotes is
T261 158-161 CC denotes and
T260 150-157 NN denotes stimuli
T259 137-149 JJ denotes inflammatory
T258 134-136 TO denotes to
T257 125-133 NN denotes response
T256 122-124 IN denotes in
T255 110-121 NN denotes macrophages
T254 107-109 IN denotes in
T253 99-106 VB denotes induced
T252 92-98 RB denotes highly
T251 89-91 VB denotes is
T250 87-88 -RRB- denotes )
T249 82-87 NN denotes PAI-2
T248 81-82 -LRB- denotes (
T247 79-80 CD denotes 2
T246 74-78 NN denotes type
T245 64-73 NN denotes inhibitor
T244 54-63 NN denotes activator
T243 42-53 NN denotes plasminogen
T242 39-41 CC denotes or
T241 30-38 NN denotes SerpinB2
T271 210-220 NN denotes macrophage
T270 208-209 -COMMA- denotes ,
T269 200-208 NN denotes immunity
T268 193-199 JJ denotes innate
R49 T241 T242 arg1Of SerpinB2,or
R50 T243 T242 arg2Of plasminogen,or
R51 T246 T241 arg1Of type,SerpinB2
R52 T246 T243 arg1Of type,plasminogen
R53 T246 T244 arg1Of type,activator
R54 T246 T245 arg1Of type,inhibitor
R55 T246 T247 arg1Of type,2
R56 T246 T248 arg1Of type,(
R57 T246 T251 arg1Of type,is
R58 T246 T253 arg2Of type,induced
R59 T246 T262 arg1Of type,is
R60 T246 T263 arg2Of type,linked
R61 T249 T248 arg2Of PAI-2,(
R62 T250 T248 arg3Of ),(
R63 T253 T251 arg2Of induced,is
R64 T253 T252 arg1Of induced,highly
R65 T253 T254 arg1Of induced,in
R66 T253 T256 arg1Of induced,in
R67 T253 T261 arg1Of induced,and
R68 T255 T254 arg2Of macrophages,in
R69 T257 T256 arg2Of response,in
R70 T257 T258 arg1Of response,to
R71 T260 T258 arg2Of stimuli,to
R72 T260 T259 arg1Of stimuli,inflammatory
R73 T263 T261 arg2Of linked,and
R74 T263 T262 arg2Of linked,is
R75 T263 T264 arg1Of linked,to
R76 T266 T264 arg2Of modulation,to
R77 T266 T265 arg1Of modulation,the
R78 T266 T267 arg1Of modulation,of
R79 T269 T268 arg1Of immunity,innate
R80 T269 T270 arg1Of immunity,","

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T159 30-38 Protein denotes SerpinB2
T160 42-80 Protein denotes plasminogen activator inhibitor type 2
T161 82-87 Protein denotes PAI-2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T530 30-38 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T537 79-85 http://www.uniprot.org/uniprot/P05120 denotes 2 (PAI

GO-BP

Id Subject Object Predicate Lexical cue
T182 193-208 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immunity
T180 125-149 http://purl.obolibrary.org/obo/GO_0006954 denotes response to inflammatory
T178 42-63 http://purl.obolibrary.org/obo/GO_0031639 denotes plasminogen activator

sentences

Id Subject Object Predicate Lexical cue
T3 21-29 Sentence denotes Abstract

simple1

Id Subject Object Predicate Lexical cue
T212 30-38 Protein denotes SerpinB2
T213 42-80 Protein denotes plasminogen activator inhibitor type 2
T214 82-87 Protein denotes PAI-2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T512 99-106 Positive_regulation denotes induced
T493 30-38 Protein denotes SerpinB2
T494 42-80 Protein denotes plasminogen activator inhibitor type 2
T495 82-87 Protein denotes PAI-2
R677 T493 T512 themeOf SerpinB2,induced
R678 T494 T512 themeOf plasminogen activator inhibitor type 2,induced
R679 T495 T512 themeOf PAI-2,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T603 30-38 Protein denotes SerpinB2
T604 42-80 Protein denotes plasminogen activator inhibitor type 2
T605 82-87 Protein denotes PAI-2
T622 99-106 Positive_regulation denotes induced
R717 T604 T622 themeOf plasminogen activator inhibitor type 2,induced

DLUT931

Id Subject Object Predicate Lexical cue
T569 30-38 Protein denotes SerpinB2
T570 42-80 Protein denotes plasminogen activator inhibitor type 2
T571 82-87 Protein denotes PAI-2
T589 99-106 Positive_regulation denotes induced
R684 T570 T589 themeOf plasminogen activator inhibitor type 2,induced
R683 T569 T589 themeOf SerpinB2,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T705 210-220 Entity denotes macrophage
T723 110-121 Entity denotes macrophages
T739 82-87 Protein denotes PAI-2
T740 30-88 Protein denotes SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2)
T744 42-88 Protein denotes plasminogen activator inhibitor type 2 (PAI-2)

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T643 99-106 Positive_regulation denotes induced
T642 99-106 Positive_regulation denotes induced
T640 82-87 Protein denotes PAI-2
T639 42-80 Protein denotes plasminogen activator inhibitor type 2
R322 T640 T643 themeOf PAI-2,induced
R706 T639 T642 themeOf plasminogen activator inhibitor type 2,induced

testone

Id Subject Object Predicate Lexical cue
T24 82-87 Protein denotes PAI-2
T23 42-80 Protein denotes plasminogen activator inhibitor type 2
T22 30-38 Protein denotes SerpinB2
R1 T24 T23 equivalentTo PAI-2,plasminogen activator inhibitor type 2

test3

Id Subject Object Predicate Lexical cue
T73 99-106 Positive_regulation denotes induced
T72 82-87 Protein denotes PAI-2
T71 42-80 Protein denotes plasminogen activator inhibitor type 2
T70 30-38 Protein denotes SerpinB2
T53 82-87 Protein denotes PAI-2
T52 42-80 Protein denotes plasminogen activator inhibitor type 2
T51 30-38 Protein denotes SerpinB2
R15 T71 T73 themeOf plasminogen activator inhibitor type 2,induced
R16 T72 T71 equivalentTo PAI-2,plasminogen activator inhibitor type 2