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PMC:3589482 / 11341-12596 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6597 1254-1255 . denotes .
T6596 1247-1254 NN denotes reagent
T6595 1236-1246 NN denotes microassay
T6594 1228-1235 NN denotes protein
T6593 1220-1227 NNP denotes Bio-Rad
T6592 1216-1219 DT denotes the
T6591 1210-1215 VBG denotes using
T6590 1199-1209 VBN denotes determined
T6589 1195-1198 VBD denotes was
T6588 1181-1194 NN denotes concentration
T6587 1173-1180 NN denotes Protein
T6586 1171-1172 . denotes .
T6585 1170-1171 -RRB- denotes )
T6584 1162-1170 NN denotes activity
T6583 1155-1161 JJ denotes pRL-TK
T6582 1146-1154 VBD denotes affected
T6581 1142-1145 NNP denotes LPS
T6580 1139-1141 CC denotes or
T6579 1137-1138 NN denotes β
T6578 1136-1137 : denotes -
T6577 1131-1136 NNP denotes C/EBP
T6576 1116-1130 JJ denotes co-transfected
T6575 1110-1115 WRB denotes where
T6574 1109-1110 -LRB- denotes (
T6573 1095-1108 NN denotes concentration
T6572 1087-1094 NN denotes protein
T6571 1078-1086 JJ denotes cellular
T6570 1075-1077 TO denotes to
T6569 1072-1074 CC denotes or
T6568 1066-1071 NNS denotes units
T6567 1060-1065 JJ denotes light
T6566 1049-1059 NN denotes luciferase
T6565 1041-1048 NN denotes renilla
T6564 1034-1040 JJ denotes pRL-TK
T6563 1031-1033 TO denotes to
T6562 1024-1030 RB denotes either
T6561 1013-1023 VBD denotes normalized
T6560 1007-1012 NNS denotes units
T6559 1001-1006 JJ denotes light
T6558 990-1000 JJ denotes luciferase
T6557 982-989 RB denotes firefly
T6556 979-981 IN denotes of
T6555 972-978 NN denotes number
T6554 968-971 DT denotes the
T6553 965-967 IN denotes as
T6552 955-964 VBN denotes expressed
T6551 952-954 VBZ denotes is
T6550 943-951 NN denotes activity
T6549 934-942 NN denotes Promoter
T6548 932-933 . denotes .
T6547 921-932 NNS denotes experiments
T6546 909-920 JJ denotes independent
T6545 903-908 CD denotes three
T6544 897-902 JJS denotes least
T6543 894-896 IN denotes at
T6542 891-893 IN denotes of
T6541 883-890 NNS denotes results
T6540 879-882 DT denotes the
T6539 869-878 VBP denotes represent
T6538 856-868 NNS denotes Measurements
T6537 854-855 . denotes .
T6536 853-854 -RRB- denotes )
T6535 846-853 NNP denotes Promega
T6534 845-846 -LRB- denotes (
T6533 841-844 NN denotes kit
T6532 834-840 NNP denotes System
T6531 828-833 NNP denotes Assay
T6530 819-827 NNP denotes Reporter
T6529 803-818 NNP denotes Dual-Luciferase
T6528 801-802 DT denotes a
T6527 795-800 VBG denotes using
T6526 786-794 VBN denotes measured
T6525 782-785 VBD denotes was
T6524 773-781 NN denotes activity
T6523 762-772 JJ denotes Luciferase
T6522 760-761 . denotes .
T6521 757-760 NNP denotes LPS
T6520 751-756 JJ denotes ng/ml
T6519 747-750 CD denotes 100
T6518 744-746 IN denotes of
T6517 736-743 NN denotes absence
T6516 733-735 CC denotes or
T6515 724-732 NN denotes presence
T6514 720-723 DT denotes the
T6513 717-719 IN denotes in
T6512 710-716 CC denotes either
T6511 708-709 NNP denotes C
T6510 707-708 CD denotes °
T6509 705-707 CD denotes 37
T6508 702-704 IN denotes at
T6507 691-701 NN denotes atmosphere
T6506 687-690 NN denotes air
T6505 676-686 JJ denotes humidified
T6504 674-675 NN denotes %
T6503 672-674 CD denotes 95
T6502 668-671 CC denotes and
T6501 664-667 CD denotes CO2
T6500 662-663 NN denotes %
T6499 661-662 CD denotes 5
T6498 659-660 DT denotes a
T6497 656-658 IN denotes in
T6496 652-655 NNS denotes hrs
T6495 649-651 CD denotes 16
T6494 639-648 VBD denotes incubated
T6493 635-638 CC denotes and
T6492 629-634 NNS denotes pools
T6491 624-628 NN denotes cell
T6490 614-623 JJ denotes identical
T6489 610-613 CD denotes two
T6488 605-609 IN denotes into
T6487 597-604 VBN denotes divided
T6486 595-596 , denotes ,
T6485 589-595 VBZ denotes plates
T6484 581-588 NN denotes culture
T6483 574-580 NN denotes tissue
T6482 567-573 JJ denotes 6-well
T6481 564-566 IN denotes in
T6480 558-563 NNS denotes media
T6479 547-557 JJ denotes pre-warmed
T6478 544-546 IN denotes of
T6477 541-543 NN denotes ml
T6476 538-540 CD denotes 10
T6475 535-537 TO denotes to
T6474 523-534 VBN denotes transferred
T6473 518-522 VBD denotes were
T6472 512-517 NNS denotes cells
T6471 500-511 JJ denotes Transfected
T6451 374-382 VBN denotes included
T6450 370-373 VBD denotes was
T6449 361-369 NN denotes enhancer
T6448 357-360 CC denotes and
T6447 348-356 NN denotes promoter
T6446 343-347 NNP denotes SV40
T6445 339-342 DT denotes the
T6444 331-338 VBZ denotes encodes
T6443 325-330 WDT denotes which
T6442 317-324 NN denotes plasmid
T6441 309-316 NN denotes control
T6440 304-308 JJ denotes pGL3
T6439 302-303 . denotes .
T6438 301-302 -RRB- denotes )
T6437 298-301 NNP denotes µFd
T6436 294-297 CD denotes 960
T6435 292-293 , denotes ,
T6434 290-292 NNP denotes kV
T6433 285-289 CD denotes 0.25
T6432 284-285 -LRB- denotes (
T6431 275-283 NNP denotes Extender
T6430 263-274 NNP denotes Capacitance
T6429 261-262 DT denotes a
T6428 256-260 IN denotes with
T6427 249-255 NNP denotes Pulser
T6426 244-248 NNP denotes Gene
T6425 236-243 NNP denotes Bio-Rad
T6424 234-235 DT denotes a
T6423 228-233 VBG denotes using
T6422 212-227 NN denotes electroporation
T6421 209-211 IN denotes by
T6420 207-208 -RRB- denotes )
T6419 205-207 NN denotes µg
T6418 203-204 CD denotes 2
T6417 202-203 -LRB- denotes (
T6416 194-201 NN denotes plasmid
T6415 185-193 NN denotes reporter
T6414 177-184 NN denotes control
T6413 168-176 JJ denotes internal
T6412 166-167 -RRB- denotes )
T6411 159-166 NNP denotes Promega
T6410 158-159 -LRB- denotes (
T6409 156-157 -RRB- denotes )
T6408 154-156 NNP denotes TK
T6407 153-154 -LRB- denotes (
T6406 146-152 NN denotes kinase
T6405 132-145 JJ denotes pRL-thymidine
T6404 128-131 DT denotes the
T6403 123-127 IN denotes with
T6402 117-122 IN denotes along
T6401 115-116 -RRB- denotes )
T6400 113-115 NN denotes µg
T6399 110-112 CD denotes 20
T6398 109-110 -LRB- denotes (
T6397 101-108 NN denotes plasmid
T6396 92-100 NN denotes reporter
T6395 81-91 NN denotes luciferase
T6394 71-80 VBN denotes indicated
T6393 67-70 DT denotes the
T6392 62-66 IN denotes with
T6391 50-61 VBN denotes transfected
T6390 45-49 VBD denotes were
T6389 39-44 NN denotes phase
T6388 35-38 VB denotes log
T6387 32-34 IN denotes in
T6386 24-31 VBG denotes growing
T6385 22-23 -RRB- denotes )
T6384 19-22 CD denotes 107
T6383 18-19 CD denotes ×
T6382 17-18 CD denotes 2
T6381 16-17 -LRB- denotes (
T6380 10-15 NNS denotes cells
T6379 4-9 CD denotes 264.7
T6378 0-3 NNP denotes RAW
T6470 498-499 . denotes .
T6469 488-498 NNS denotes activities
T6468 479-487 NN denotes enhancer
T6467 475-478 CC denotes and
T6466 466-474 NN denotes promoter
T6465 462-465 IN denotes for
T6464 453-461 NN denotes standard
T6463 444-452 JJ denotes internal
T6462 441-443 DT denotes an
T6461 438-440 IN denotes as
T6460 434-437 CC denotes and
T6459 432-433 , denotes ,
T6458 422-432 NN denotes efficiency
T6457 409-421 NN denotes transfection
T6456 405-408 IN denotes for
T6455 397-404 NN denotes control
T6454 388-396 JJ denotes positive
T6453 386-387 DT denotes a
T6452 383-385 IN denotes as
R4517 T6379 T6378 nummod 264.7,RAW
R4519 T6381 T6380 punct (,cells
R4520 T6382 T6384 nummod 2,107
R4521 T6383 T6384 nummod ×,107
R4522 T6384 T6380 appos 107,cells
R4523 T6385 T6380 punct ),cells
R4524 T6386 T6386 ROOT growing,growing
R4525 T6387 T6386 prep in,growing
R4526 T6388 T6389 compound log,phase
R4527 T6389 T6387 pobj phase,in
R4528 T6390 T6391 auxpass were,transfected
R4529 T6391 T6386 conj transfected,growing
R4530 T6392 T6391 prep with,transfected
R4531 T6393 T6397 det the,plasmid
R4532 T6394 T6397 amod indicated,plasmid
R4533 T6395 T6397 compound luciferase,plasmid
R4534 T6396 T6397 compound reporter,plasmid
R4535 T6397 T6392 pobj plasmid,with
R4536 T6398 T6397 punct (,plasmid
R4537 T6399 T6400 nummod 20,µg
R4538 T6400 T6397 appos µg,plasmid
R4539 T6401 T6397 punct ),plasmid
R4540 T6402 T6391 prep along,transfected
R4541 T6403 T6402 prep with,along
R4542 T6404 T6406 det the,kinase
R4543 T6405 T6406 amod pRL-thymidine,kinase
R4544 T6406 T6403 pobj kinase,with
R4545 T6407 T6406 punct (,kinase
R4546 T6408 T6406 appos TK,kinase
R4547 T6409 T6406 punct ),kinase
R4548 T6410 T6411 punct (,Promega
R4549 T6411 T6406 appos Promega,kinase
R4550 T6412 T6411 punct ),Promega
R4551 T6413 T6414 amod internal,control
R4552 T6414 T6416 compound control,plasmid
R4553 T6415 T6416 compound reporter,plasmid
R4554 T6416 T6406 appos plasmid,kinase
R4555 T6417 T6419 punct (,µg
R4556 T6418 T6419 nummod 2,µg
R4557 T6419 T6416 appos µg,plasmid
R4558 T6420 T6406 punct ),kinase
R4559 T6421 T6391 agent by,transfected
R4560 T6422 T6421 pobj electroporation,by
R4561 T6423 T6391 advcl using,transfected
R4562 T6424 T6427 det a,Pulser
R4563 T6425 T6427 compound Bio-Rad,Pulser
R4564 T6426 T6427 compound Gene,Pulser
R4565 T6427 T6423 dobj Pulser,using
R4566 T6428 T6423 prep with,using
R4567 T6429 T6431 det a,Extender
R4568 T6430 T6431 compound Capacitance,Extender
R4569 T6431 T6428 pobj Extender,with
R4570 T6432 T6434 punct (,kV
R4571 T6433 T6434 nummod 0.25,kV
R4572 T6434 T6437 npadvmod kV,µFd
R4573 T6435 T6437 punct ",",µFd
R4574 T6436 T6437 nummod 960,µFd
R4575 T6437 T6437 ROOT µFd,µFd
R4576 T6438 T6437 punct ),µFd
R4577 T6439 T6386 punct .,growing
R4578 T6440 T6442 amod pGL3,plasmid
R4579 T6441 T6442 compound control,plasmid
R4580 T6442 T6451 nsubjpass plasmid,included
R4581 T6443 T6444 nsubj which,encodes
R4582 T6444 T6442 relcl encodes,plasmid
R4583 T6445 T6447 det the,promoter
R4584 T6446 T6447 compound SV40,promoter
R4585 T6447 T6444 dobj promoter,encodes
R4586 T6448 T6447 cc and,promoter
R4587 T6449 T6447 conj enhancer,promoter
R4588 T6450 T6451 auxpass was,included
R4589 T6451 T6451 ROOT included,included
R4590 T6452 T6451 prep as,included
R4591 T6453 T6455 det a,control
R4592 T6454 T6455 amod positive,control
R4593 T6455 T6452 pobj control,as
R4594 T6456 T6455 prep for,control
R4595 T6457 T6458 compound transfection,efficiency
R4596 T6458 T6456 pobj efficiency,for
R4597 T6459 T6451 punct ",",included
R4598 T6460 T6451 cc and,included
R4599 T6461 T6451 prep as,included
R4600 T6462 T6464 det an,standard
R4601 T6463 T6464 amod internal,standard
R4602 T6464 T6461 pobj standard,as
R4603 T6465 T6464 prep for,standard
R4604 T6466 T6469 nmod promoter,activities
R4605 T6467 T6466 cc and,promoter
R4606 T6468 T6466 conj enhancer,promoter
R4607 T6469 T6465 pobj activities,for
R4608 T6470 T6451 punct .,included
R4609 T6471 T6472 amod Transfected,cells
R4610 T6472 T6474 nsubjpass cells,transferred
R4611 T6473 T6474 auxpass were,transferred
R4612 T6474 T6474 ROOT transferred,transferred
R4613 T6475 T6474 prep to,transferred
R4614 T6476 T6477 nummod 10,ml
R4615 T6477 T6475 pobj ml,to
R4616 T6478 T6477 prep of,ml
R4617 T6479 T6480 amod pre-warmed,media
R4618 T6480 T6478 pobj media,of
R4619 T6481 T6477 prep in,ml
R4620 T6482 T6484 amod 6-well,culture
R4621 T6483 T6484 compound tissue,culture
R4622 T6484 T6485 compound culture,plates
R4623 T6485 T6481 pobj plates,in
R4624 T6486 T6485 punct ",",plates
R4625 T6487 T6474 conj divided,transferred
R4626 T6488 T6487 prep into,divided
R4627 T6489 T6492 nummod two,pools
R4628 T6490 T6492 amod identical,pools
R4629 T6491 T6492 compound cell,pools
R4630 T6492 T6488 pobj pools,into
R4631 T6493 T6487 cc and,divided
R4632 T6494 T6487 conj incubated,divided
R4633 T6495 T6496 nummod 16,hrs
R4634 T6496 T6494 dobj hrs,incubated
R4635 T6497 T6494 prep in,incubated
R4636 T6498 T6507 det a,atmosphere
R4637 T6499 T6500 nummod 5,%
R4638 T6500 T6507 nmod %,atmosphere
R4639 T6501 T6504 nummod CO2,%
R4640 T6502 T6501 cc and,CO2
R4641 T6503 T6504 nummod 95,%
R4642 T6504 T6507 nmod %,atmosphere
R4643 T6505 T6507 amod humidified,atmosphere
R4644 T6506 T6507 compound air,atmosphere
R4645 T6507 T6497 pobj atmosphere,in
R4646 T6508 T6494 prep at,incubated
R4647 T6509 T6510 nummod 37,°
R4648 T6510 T6508 pobj °,at
R4649 T6511 T6494 conj C,incubated
R4650 T6512 T6513 preconj either,in
R4651 T6513 T6494 prep in,incubated
R4652 T6514 T6515 det the,presence
R4653 T6515 T6513 pobj presence,in
R4654 T6516 T6515 cc or,presence
R4655 T6517 T6515 conj absence,presence
R4656 T6518 T6517 prep of,absence
R4657 T6519 T6521 nummod 100,LPS
R4658 T6520 T6521 amod ng/ml,LPS
R4659 T6521 T6518 pobj LPS,of
R4660 T6522 T6474 punct .,transferred
R4661 T6523 T6524 amod Luciferase,activity
R4662 T6524 T6526 nsubjpass activity,measured
R4663 T6525 T6526 auxpass was,measured
R4664 T6526 T6526 ROOT measured,measured
R4665 T6527 T6526 advcl using,measured
R4666 T6528 T6533 det a,kit
R4667 T6529 T6532 compound Dual-Luciferase,System
R4668 T6530 T6532 compound Reporter,System
R4669 T6531 T6532 compound Assay,System
R4670 T6532 T6533 compound System,kit
R4671 T6533 T6527 dobj kit,using
R4672 T6534 T6533 punct (,kit
R4673 T6535 T6533 appos Promega,kit
R4674 T6536 T6533 punct ),kit
R4675 T6537 T6526 punct .,measured
R4676 T6538 T6539 nsubj Measurements,represent
R4677 T6539 T6539 ROOT represent,represent
R4678 T6540 T6541 det the,results
R4679 T6541 T6539 dobj results,represent
R4680 T6542 T6541 prep of,results
R4681 T6543 T6544 advmod at,least
R4682 T6544 T6545 advmod least,three
R4683 T6545 T6547 nummod three,experiments
R4684 T6546 T6547 amod independent,experiments
R4685 T6547 T6542 pobj experiments,of
R4686 T6548 T6539 punct .,represent
R4687 T6549 T6550 compound Promoter,activity
R4688 T6550 T6552 nsubjpass activity,expressed
R4689 T6551 T6552 auxpass is,expressed
R4690 T6552 T6552 ROOT expressed,expressed
R4691 T6553 T6552 prep as,expressed
R4692 T6554 T6555 det the,number
R4693 T6555 T6553 pobj number,as
R4694 T6556 T6555 prep of,number
R4695 T6557 T6558 advmod firefly,luciferase
R4696 T6558 T6560 amod luciferase,units
R4697 T6559 T6560 amod light,units
R4698 T6560 T6556 pobj units,of
R4699 T6561 T6552 conj normalized,expressed
R4700 T6562 T6561 advmod either,normalized
R4701 T6563 T6564 aux to,pRL-TK
R4702 T6564 T6562 xcomp pRL-TK,either
R4703 T6565 T6566 compound renilla,luciferase
R4704 T6566 T6568 amod luciferase,units
R4705 T6567 T6568 amod light,units
R4706 T6568 T6564 dobj units,pRL-TK
R4707 T6569 T6564 cc or,pRL-TK
R4708 T6570 T6564 conj to,pRL-TK
R4709 T6571 T6573 amod cellular,concentration
R4710 T6572 T6573 compound protein,concentration
R4711 T6573 T6570 pobj concentration,to
R4712 T6574 T6573 punct (,concentration
R4713 T6575 T6582 advmod where,affected
R4714 T6576 T6582 nsubj co-transfected,affected
R4715 T6577 T6579 compound C/EBP,β
R4716 T6578 T6579 punct -,β
R4717 T6579 T6582 nsubj β,affected
R4718 T6580 T6579 cc or,β
R4719 T6581 T6579 conj LPS,β
R4720 T6582 T6573 relcl affected,concentration
R4721 T6583 T6584 amod pRL-TK,activity
R4722 T6584 T6582 dobj activity,affected
R4723 T6585 T6573 punct ),concentration
R4724 T6586 T6552 punct .,expressed
R4725 T6587 T6588 compound Protein,concentration
R4726 T6588 T6590 nsubjpass concentration,determined
R4727 T6589 T6590 auxpass was,determined
R4728 T6590 T6590 ROOT determined,determined
R4729 T6591 T6590 advcl using,determined
R4730 T6592 T6594 det the,protein
R4731 T6593 T6594 compound Bio-Rad,protein
R4732 T6594 T6591 dobj protein,using
R4733 T6595 T6596 compound microassay,reagent
R4734 T6596 T6594 appos reagent,protein
R4735 T6597 T6590 punct .,determined

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6246 1247-1254 NN denotes reagent
T6245 1236-1246 NN denotes microassay
T6244 1228-1235 NN denotes protein
T6243 1220-1227 JJ denotes Bio-Rad
T6242 1216-1219 DT denotes the
T6241 1210-1215 VB denotes using
T6240 1199-1209 VB denotes determined
T6239 1195-1198 VB denotes was
T6238 1181-1194 NN denotes concentration
T6237 1173-1180 NN denotes Protein
T6236 1170-1171 -RRB- denotes )
T6225 1087-1094 NN denotes protein
T6224 1078-1086 JJ denotes cellular
T6223 1075-1077 TO denotes to
T6222 1072-1074 CC denotes or
T6221 1066-1071 NN denotes units
T6220 1060-1065 JJ denotes light
T6219 1049-1059 NN denotes luciferase
T6218 1041-1048 NN denotes renilla
T6217 1034-1040 NN denotes pRL-TK
T6216 1031-1033 TO denotes to
T6215 1024-1030 CC denotes either
T6214 1013-1023 VB denotes normalized
T6213 1007-1012 NN denotes units
T6212 1001-1006 JJ denotes light
T6211 990-1000 NN denotes luciferase
T6210 982-989 JJ denotes firefly
T6209 979-981 IN denotes of
T6208 972-978 NN denotes number
T6207 968-971 DT denotes the
T6206 965-967 IN denotes as
T6205 955-964 VB denotes expressed
T6204 952-954 VB denotes is
T6203 943-951 NN denotes activity
T6202 934-942 NN denotes Promoter
T6201 921-932 NN denotes experiments
T6200 909-920 JJ denotes independent
T6199 903-908 CD denotes three
T6198 897-902 JJ denotes least
T6197 894-896 IN denotes at
T6196 891-893 IN denotes of
T6195 883-890 NN denotes results
T6194 879-882 DT denotes the
T6193 869-878 VB denotes represent
T6192 856-868 NN denotes Measurements
T6191 853-854 -RRB- denotes )
T6190 846-853 NN denotes Promega
T6189 845-846 -LRB- denotes (
T6188 841-844 NN denotes kit
T6187 834-840 NN denotes System
T6186 828-833 NNP denotes Assay
T6185 819-827 NNP denotes Reporter
T6184 803-818 NNP denotes Dual-Luciferase
T6183 801-802 DT denotes a
T6182 795-800 VB denotes using
T6181 786-794 VB denotes measured
T6180 782-785 VB denotes was
T6179 773-781 NN denotes activity
T6178 762-772 NN denotes Luciferase
T6177 757-760 NN denotes LPS
T6176 751-756 NN denotes ng/ml
T6175 747-750 CD denotes 100
T6174 744-746 IN denotes of
T6173 736-743 NN denotes absence
T6172 733-735 CC denotes or
T6171 724-732 NN denotes presence
T6170 720-723 DT denotes the
T6169 717-719 IN denotes in
T6168 710-716 CC denotes either
T6167 705-709 NN denotes 37°C
T6166 702-704 IN denotes at
T6165 691-701 NN denotes atmosphere
T6164 687-690 NN denotes air
T6163 676-686 VB denotes humidified
T6162 674-675 NN denotes %
T6161 672-674 CD denotes 95
T6160 668-671 CC denotes and
T6159 664-667 NN denotes CO2
T6158 662-663 NN denotes %
T6157 661-662 CD denotes 5
T6156 659-660 DT denotes a
T6155 656-658 IN denotes in
T6154 652-655 NN denotes hrs
T6153 649-651 CD denotes 16
T6152 639-648 VB denotes incubated
T6151 635-638 CC denotes and
T6150 629-634 NN denotes pools
T6149 624-628 NN denotes cell
T6148 614-623 JJ denotes identical
T6147 610-613 CD denotes two
T6146 605-609 IN denotes into
T6145 597-604 VB denotes divided
T6144 595-596 -COMMA- denotes ,
T6143 589-595 NN denotes plates
T6142 581-588 NN denotes culture
T6141 574-580 NN denotes tissue
T6140 567-573 JJ denotes 6-well
T6139 564-566 IN denotes in
T6138 558-563 NN denotes media
T6137 547-557 JJ denotes pre-warmed
T6136 544-546 IN denotes of
T6135 541-543 NN denotes ml
T6134 538-540 CD denotes 10
T6133 535-537 TO denotes to
T6132 523-534 VB denotes transferred
T6131 518-522 VB denotes were
T6130 512-517 NN denotes cells
T6129 500-511 VB denotes Transfected
T6128 464-474 NN denotes r promoter
T6127 456-464 NN denotes ndard fo
T6126 453-456 CC denotes sta
T6125 444-452 NN denotes internal
T6124 441-444 IN denotes an
T6123 432-440 NN denotes , and as
T6122 424-432 JJ denotes ficiency
T6121 422-424 DT denotes ef
T6120 419-421 IN denotes on
T6119 416-419 CC denotes cti
T6118 415-416 -COMMA- denotes e
T6117 405-415 NN denotes for transf
T6116 393-405 NN denotes ive control
T6115 390-393 IN denotes sit
T6114 383-390 NN denotes as a po
T6113 374-382 JJ denotes included
T6112 372-373 DT denotes s
T6111 370-372 IN denotes wa
T6110 362-370 VB denotes nhancer
T6109 359-362 VB denotes d e
T6108 351-359 NN denotes moter an
T6107 348-351 CC denotes pro
T6106 339-347 NN denotes the SV40
T6105 335-339 NN denotes des
T6104 332-335 DT denotes nco
T6103 325-332 VB denotes which e
T6102 320-325 WDT denotes smid
T6101 313-320 NN denotes rol pla
T6100 306-313 NN denotes L3 cont
T6099 302-306 NN denotes . pG
T6098 301-302 -RRB- denotes )
T6097 298-301 NNP denotes µFd
T6096 294-297 CD denotes 960
T6095 292-293 -COMMA- denotes ,
T6094 290-292 NN denotes kV
T6093 285-289 CD denotes 0.25
T6092 284-285 -LRB- denotes (
T6091 275-283 NNP denotes Extender
T6090 263-274 NNP denotes Capacitance
T6089 261-262 DT denotes a
T6088 256-260 IN denotes with
T6087 249-255 NNP denotes Pulser
T6086 244-248 NNP denotes Gene
T6085 236-243 NNP denotes Bio-Rad
T6084 234-235 DT denotes a
T6083 228-233 VB denotes using
T6082 212-227 NN denotes electroporation
T6081 209-211 IN denotes by
T6080 207-208 -RRB- denotes )
T6079 205-207 NN denotes µg
T6078 203-204 CD denotes 2
T6077 202-203 -LRB- denotes (
T6076 194-201 NN denotes plasmid
T6075 185-193 NN denotes reporter
T6074 177-184 NN denotes control
T6073 168-176 JJ denotes internal
T6072 166-167 -RRB- denotes )
T6071 159-166 NN denotes Promega
T6070 158-159 -LRB- denotes (
T6069 156-157 -RRB- denotes )
T6068 154-156 NN denotes TK
T6067 153-154 -LRB- denotes (
T6066 146-152 NN denotes kinase
T6065 132-145 NN denotes pRL-thymidine
T6064 128-131 DT denotes the
T6063 123-127 IN denotes with
T6062 117-122 IN denotes along
T6061 115-116 -RRB- denotes )
T6060 113-115 NN denotes µg
T6059 110-112 CD denotes 20
T6058 109-110 -LRB- denotes (
T6057 101-108 NN denotes plasmid
T6056 92-100 NN denotes reporter
T6055 81-91 NN denotes luciferase
T6054 71-80 VB denotes indicated
T6053 67-70 DT denotes the
T6052 62-66 IN denotes with
T6051 50-61 VB denotes transfected
T6050 45-49 VB denotes were
T6049 39-44 NN denotes phase
T6048 35-38 NN denotes log
T6047 32-34 IN denotes in
T6046 24-31 VB denotes growing
T6045 22-23 -RRB- denotes )
T6044 17-22 CD denotes 2×107
T6043 16-17 -LRB- denotes (
T6042 10-15 NN denotes cells
T6041 4-9 CD denotes 264.7
T6040 0-3 NN denotes RAW
T6235 1162-1170 NN denotes activity
T6234 1155-1161 NN denotes pRL-TK
T6233 1146-1154 VB denotes affected
T6232 1142-1145 NN denotes LPS
T6231 1139-1141 CC denotes or
T6230 1131-1138 NN denotes C/EBP-β
T6229 1116-1130 VB denotes co-transfected
T6228 1110-1115 WRB denotes where
T6227 1109-1110 -LRB- denotes (
T6226 1095-1108 NN denotes concentration
R4277 T6042 T6040 arg1Of cells,RAW
R4278 T6042 T6041 arg1Of cells,264.7
R4279 T6042 T6043 arg1Of cells,(
R4280 T6042 T6046 arg1Of cells,growing
R4281 T6042 T6050 arg1Of cells,were
R4282 T6042 T6051 arg2Of cells,transfected
R4283 T6044 T6043 arg2Of 2×107,(
R4284 T6045 T6043 arg3Of ),(
R4285 T6046 T6047 arg1Of growing,in
R4286 T6049 T6047 arg2Of phase,in
R4287 T6049 T6048 arg1Of phase,log
R4288 T6051 T6050 arg2Of transfected,were
R4289 T6051 T6052 arg1Of transfected,with
R4290 T6051 T6062 arg1Of transfected,along
R4291 T6051 T6107 arg1Of transfected,pro
R4292 T6057 T6052 arg2Of plasmid,with
R4293 T6057 T6053 arg1Of plasmid,the
R4294 T6057 T6054 arg2Of plasmid,indicated
R4295 T6057 T6055 arg1Of plasmid,luciferase
R4296 T6057 T6056 arg1Of plasmid,reporter
R4297 T6057 T6058 arg1Of plasmid,(
R4298 T6060 T6058 arg2Of µg,(
R4299 T6060 T6059 arg1Of µg,20
R4300 T6061 T6058 arg3Of ),(
R4301 T6062 T6063 arg1Of along,with
R4302 T6066 T6065 arg1Of kinase,pRL-thymidine
R4303 T6066 T6067 arg1Of kinase,(
R4304 T6068 T6067 arg2Of TK,(
R4305 T6069 T6067 arg3Of ),(
R4306 T6071 T6070 arg2Of Promega,(
R4307 T6072 T6070 arg3Of ),(
R4308 T6076 T6063 arg2Of plasmid,with
R4309 T6076 T6064 arg1Of plasmid,the
R4310 T6076 T6066 arg1Of plasmid,kinase
R4311 T6076 T6070 arg1Of plasmid,(
R4312 T6076 T6073 arg1Of plasmid,internal
R4313 T6076 T6074 arg1Of plasmid,control
R4314 T6076 T6075 arg1Of plasmid,reporter
R4315 T6076 T6077 arg1Of plasmid,(
R4316 T6076 T6081 arg1Of plasmid,by
R4317 T6079 T6077 arg2Of µg,(
R4318 T6079 T6078 arg1Of µg,2
R4319 T6080 T6077 arg3Of ),(
R4320 T6082 T6081 arg2Of electroporation,by
R4321 T6082 T6083 arg1Of electroporation,using
R4322 T6083 T6088 arg1Of using,with
R4323 T6087 T6083 arg2Of Pulser,using
R4324 T6087 T6084 arg1Of Pulser,a
R4325 T6087 T6085 arg1Of Pulser,Bio-Rad
R4326 T6087 T6086 arg1Of Pulser,Gene
R4327 T6091 T6090 arg1Of Extender,Capacitance
R4328 T6091 T6092 arg1Of Extender,(
R4329 T6094 T6092 arg2Of kV,(
R4330 T6094 T6093 arg1Of kV,0.25
R4331 T6094 T6095 arg1Of kV,","
R4332 T6094 T6097 arg1Of kV,µFd
R4333 T6096 T6095 arg2Of 960,","
R4334 T6098 T6092 arg3Of ),(
R4335 T6101 T6088 arg2Of rol pla,with
R4336 T6101 T6089 arg1Of rol pla,a
R4337 T6101 T6091 arg1Of rol pla,Extender
R4338 T6101 T6099 arg1Of rol pla,. pG
R4339 T6101 T6100 arg1Of rol pla,L3 cont
R4340 T6101 T6102 arg1Of rol pla,smid
R4341 T6101 T6103 arg1Of rol pla,which e
R4342 T6106 T6103 arg2Of the SV40,which e
R4343 T6106 T6104 arg1Of the SV40,nco
R4344 T6106 T6105 arg1Of the SV40,des
R4345 T6108 T6109 arg1Of moter an,d e
R4346 T6108 T6110 arg2Of moter an,nhancer
R4347 T6110 T6107 arg2Of nhancer ,pro
R4348 T6110 T6109 arg2Of nhancer ,d e
R4349 T6110 T6111 arg1Of nhancer ,wa
R4350 T6110 T6120 arg1Of nhancer ,on
R4351 T6111 T6119 arg1Of wa,cti
R4352 T6114 T6111 arg2Of as a po,wa
R4353 T6114 T6112 arg1Of as a po,s
R4354 T6114 T6113 arg1Of as a po,included
R4355 T6114 T6115 arg1Of as a po,sit
R4356 T6117 T6115 arg2Of for transf,sit
R4357 T6117 T6116 arg1Of for transf,ive control
R4358 T6119 T6118 arg1Of cti,e
R4359 T6120 T6119 arg2Of on,cti
R4360 T6123 T6120 arg2Of ", and as",on
R4361 T6123 T6121 arg1Of ", and as",ef
R4362 T6123 T6122 arg1Of ", and as",ficiency
R4363 T6123 T6124 arg1Of ", and as",an
R4364 T6125 T6126 arg1Of internal,sta
R4365 T6127 T6126 arg2Of ndard fo,sta
R4366 T6128 T6124 arg2Of r promoter,an
R4367 T6128 T6125 arg1Of r promoter,internal
R4368 T6128 T6127 arg1Of r promoter,ndard fo
R4369 T6130 T6129 arg2Of cells,Transfected
R4370 T6130 T6131 arg1Of cells,were
R4371 T6130 T6132 arg2Of cells,transferred
R4372 T6132 T6131 arg2Of transferred,were
R4373 T6132 T6133 arg1Of transferred,to
R4374 T6132 T6160 arg1Of transferred,and
R4375 T6135 T6133 arg2Of ml,to
R4376 T6135 T6134 arg1Of ml,10
R4377 T6135 T6136 arg1Of ml,of
R4378 T6135 T6139 arg1Of ml,in
R4379 T6135 T6144 arg1Of ml,","
R4380 T6135 T6145 arg2Of ml,divided
R4381 T6138 T6136 arg2Of media,of
R4382 T6138 T6137 arg1Of media,pre-warmed
R4383 T6143 T6139 arg2Of plates,in
R4384 T6143 T6140 arg1Of plates,6-well
R4385 T6143 T6141 arg1Of plates,tissue
R4386 T6143 T6142 arg1Of plates,culture
R4387 T6145 T6146 arg1Of divided,into
R4388 T6145 T6155 arg1Of divided,in
R4389 T6150 T6147 arg1Of pools,two
R4390 T6150 T6148 arg1Of pools,identical
R4391 T6150 T6149 arg1Of pools,cell
R4392 T6150 T6151 arg1Of pools,and
R4393 T6151 T6146 arg2Of and,into
R4394 T6154 T6151 arg2Of hrs,and
R4395 T6154 T6152 arg2Of hrs,incubated
R4396 T6154 T6153 arg1Of hrs,16
R4397 T6157 T6158 arg1Of 5,%
R4398 T6159 T6155 arg2Of CO2,in
R4399 T6159 T6156 arg1Of CO2,a
R4400 T6159 T6157 arg1Of CO2,5
R4401 T6162 T6161 arg1Of %,95
R4402 T6162 T6163 arg1Of %,humidified
R4403 T6163 T6160 arg2Of humidified,and
R4404 T6163 T6166 arg1Of humidified,at
R4405 T6163 T6169 arg1Of humidified,in
R4406 T6165 T6163 arg2Of atmosphere,humidified
R4407 T6165 T6164 arg1Of atmosphere,air
R4408 T6167 T6166 arg2Of 37°C,at
R4409 T6169 T6168 arg1Of in,either
R4410 T6171 T6172 arg1Of presence,or
R4411 T6172 T6169 arg2Of or,in
R4412 T6172 T6170 arg1Of or,the
R4413 T6172 T6174 arg1Of or,of
R4414 T6173 T6172 arg2Of absence,or
R4415 T6175 T6176 arg1Of 100,ng/ml
R4416 T6177 T6174 arg2Of LPS,of
R4417 T6177 T6175 arg1Of LPS,100
R4418 T6179 T6178 arg1Of activity,Luciferase
R4419 T6179 T6180 arg1Of activity,was
R4420 T6179 T6181 arg2Of activity,measured
R4421 T6181 T6180 arg2Of measured,was
R4422 T6182 T6181 arg3Of using,measured
R4423 T6186 T6184 arg1Of Assay,Dual-Luciferase
R4424 T6186 T6185 arg1Of Assay,Reporter
R4425 T6188 T6182 arg2Of kit,using
R4426 T6188 T6183 arg1Of kit,a
R4427 T6188 T6186 arg1Of kit,Assay
R4428 T6188 T6187 arg1Of kit,System
R4429 T6188 T6189 arg1Of kit,(
R4430 T6190 T6189 arg2Of Promega,(
R4431 T6191 T6189 arg3Of ),(
R4432 T6192 T6193 arg1Of Measurements,represent
R4433 T6195 T6193 arg2Of results,represent
R4434 T6195 T6194 arg1Of results,the
R4435 T6195 T6196 arg1Of results,of
R4436 T6199 T6197 arg1Of three,at
R4437 T6199 T6198 arg1Of three,least
R4438 T6201 T6196 arg2Of experiments,of
R4439 T6201 T6199 arg1Of experiments,three
R4440 T6201 T6200 arg1Of experiments,independent
R4441 T6203 T6202 arg1Of activity,Promoter
R4442 T6203 T6204 arg1Of activity,is
R4443 T6203 T6205 arg2Of activity,expressed
R4444 T6205 T6204 arg2Of expressed,is
R4445 T6205 T6206 arg1Of expressed,as
R4446 T6205 T6223 arg1Of expressed,to
R4447 T6206 T6222 arg1Of as,or
R4448 T6208 T6206 arg2Of number,as
R4449 T6208 T6207 arg1Of number,the
R4450 T6208 T6209 arg1Of number,of
R4451 T6213 T6209 arg2Of units,of
R4452 T6213 T6210 arg1Of units,firefly
R4453 T6213 T6211 arg1Of units,luciferase
R4454 T6213 T6212 arg1Of units,light
R4455 T6213 T6214 arg2Of units,normalized
R4456 T6214 T6216 arg1Of normalized,to
R4457 T6216 T6215 arg1Of to,either
R4458 T6221 T6216 arg2Of units,to
R4459 T6221 T6217 arg1Of units,pRL-TK
R4460 T6221 T6218 arg1Of units,renilla
R4461 T6221 T6219 arg1Of units,luciferase
R4462 T6221 T6220 arg1Of units,light
R4463 T6223 T6222 arg2Of to,or
R4464 T6226 T6223 arg2Of concentration,to
R4465 T6226 T6224 arg1Of concentration,cellular
R4466 T6226 T6225 arg1Of concentration,protein
R4467 T6226 T6227 arg1Of concentration,(
R4468 T6228 T6227 arg2Of where,(
R4469 T6230 T6231 arg1Of C/EBP-β,or
R4470 T6231 T6229 arg2Of or,co-transfected
R4471 T6231 T6233 arg1Of or,affected
R4472 T6232 T6231 arg2Of LPS,or
R4473 T6233 T6228 arg1Of affected,where
R4474 T6235 T6233 arg2Of activity,affected
R4475 T6235 T6234 arg1Of activity,pRL-TK
R4476 T6236 T6227 arg3Of ),(
R4477 T6238 T6237 arg1Of concentration,Protein
R4478 T6238 T6239 arg1Of concentration,was
R4479 T6238 T6240 arg2Of concentration,determined
R4480 T6240 T6239 arg2Of determined,was
R4481 T6241 T6240 arg3Of using,determined
R4482 T6246 T6241 arg2Of reagent,using
R4483 T6246 T6242 arg1Of reagent,the
R4484 T6246 T6243 arg1Of reagent,Bio-Rad
R4485 T6246 T6244 arg1Of reagent,protein
R4486 T6246 T6245 arg1Of reagent,microassay

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T5987 154-156 Protein denotes TK
T5986 136-152 Protein denotes thymidine kinase
T5985 81-91 Protein denotes luciferase
T5994 1159-1161 Protein denotes TK
T5993 1131-1138 Protein denotes C/EBP-β
T5992 1049-1059 Protein denotes luciferase
T5991 1038-1040 Protein denotes TK
T5990 990-1000 Protein denotes luciferase
T5989 808-818 Protein denotes Luciferase
T5988 762-772 Protein denotes Luciferase

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6265 1131-1138 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T6264 1049-1059 http://www.uniprot.org/uniprot/P08659 denotes luciferase
T6263 990-1000 http://www.uniprot.org/uniprot/P08659 denotes luciferase
T6262 808-818 http://www.uniprot.org/uniprot/P08659 denotes Luciferase
T6261 762-772 http://www.uniprot.org/uniprot/P08659 denotes Luciferase

UBERON-AE

Id Subject Object Predicate Lexical cue
T5964 574-580 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

GO-BP

Id Subject Object Predicate Lexical cue
T6000 1078-1086 http://purl.obolibrary.org/obo/GO_0007349 denotes cellular
T5999 762-781 http://purl.obolibrary.org/obo/GO_0050397 denotes Luciferase activity
T5998 762-781 http://purl.obolibrary.org/obo/GO_0050248 denotes Luciferase activity
T5997 762-781 http://purl.obolibrary.org/obo/GO_0047712 denotes Luciferase activity
T5996 762-781 http://purl.obolibrary.org/obo/GO_0047077 denotes Luciferase activity
T5995 762-781 http://purl.obolibrary.org/obo/GO_0045289 denotes Luciferase activity

GO-MF

Id Subject Object Predicate Lexical cue
T6001 762-781 http://purl.obolibrary.org/obo/GO_0045289 denotes Luciferase activity
T6005 762-781 http://purl.obolibrary.org/obo/GO_0050397 denotes Luciferase activity
T6004 762-781 http://purl.obolibrary.org/obo/GO_0050248 denotes Luciferase activity
T6003 762-781 http://purl.obolibrary.org/obo/GO_0047712 denotes Luciferase activity
T6002 762-781 http://purl.obolibrary.org/obo/GO_0047077 denotes Luciferase activity

GO-CC

Id Subject Object Predicate Lexical cue
T6008 624-628 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T6007 512-517 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T6006 10-15 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T5971 1173-1255 Sentence denotes Protein concentration was determined using the Bio-Rad protein microassay reagent.
T5970 934-1172 Sentence denotes Promoter activity is expressed as the number of firefly luciferase light units normalized either to pRL-TK renilla luciferase light units or to cellular protein concentration (where co-transfected C/EBP-β or LPS affected pRL-TK activity).
T5969 856-933 Sentence denotes Measurements represent the results of at least three independent experiments.
T5968 762-855 Sentence denotes Luciferase activity was measured using a Dual-Luciferase Reporter Assay System kit (Promega).
T5967 500-761 Sentence denotes Transfected cells were transferred to 10 ml of pre-warmed media in 6-well tissue culture plates, divided into two identical cell pools and incubated 16 hrs in a 5% CO2 and 95% humidified air atmosphere at 37°C either in the presence or absence of 100 ng/ml LPS.
T5966 0-499 Sentence denotes RAW 264.7 cells (2×107) growing in log phase were transfected with the indicated luciferase reporter plasmid (20 µg) along with the pRL-thymidine kinase (TK) (Promega) internal control reporter plasmid (2 µg) by electroporation using a Bio-Rad Gene Pulser with a Capacitance Extender (0.25 kV, 960 µFd). pGL3 control plasmid which encodes the SV40 promoter and enhancer was included as a positive control for transfection efficiency, and as an internal standard for promoter and enhancer activities.
T70 0-499 Sentence denotes RAW 264.7 cells (2×107) growing in log phase were transfected with the indicated luciferase reporter plasmid (20 µg) along with the pRL-thymidine kinase (TK) (Promega) internal control reporter plasmid (2 µg) by electroporation using a Bio-Rad Gene Pulser with a Capacitance Extender (0.25 kV, 960 µFd). pGL3 control plasmid which encodes the SV40 promoter and enhancer was included as a positive control for transfection efficiency, and as an internal standard for promoter and enhancer activities.
T71 500-761 Sentence denotes Transfected cells were transferred to 10 ml of pre-warmed media in 6-well tissue culture plates, divided into two identical cell pools and incubated 16 hrs in a 5% CO2 and 95% humidified air atmosphere at 37°C either in the presence or absence of 100 ng/ml LPS.
T72 762-855 Sentence denotes Luciferase activity was measured using a Dual-Luciferase Reporter Assay System kit (Promega).
T73 856-933 Sentence denotes Measurements represent the results of at least three independent experiments.
T74 934-1172 Sentence denotes Promoter activity is expressed as the number of firefly luciferase light units normalized either to pRL-TK renilla luciferase light units or to cellular protein concentration (where co-transfected C/EBP-β or LPS affected pRL-TK activity).
T75 1173-1255 Sentence denotes Protein concentration was determined using the Bio-Rad protein microassay reagent.

simple1

Id Subject Object Predicate Lexical cue
T6030 1159-1161 Protein denotes TK
T6029 1131-1138 Protein denotes C/EBP-β
T6028 1049-1059 Protein denotes luciferase
T6027 1038-1040 Protein denotes TK
T6026 990-1000 Protein denotes luciferase
T6025 808-818 Protein denotes Luciferase
T6024 762-772 Protein denotes Luciferase
T6023 154-156 Protein denotes TK
T6022 136-152 Protein denotes thymidine kinase
T6021 81-91 Protein denotes luciferase

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6259 1146-1154 Regulation denotes affected
T6258 1116-1130 Gene_expression denotes co-transfected
T6257 1049-1059 Protein denotes luciferase
T6256 1038-1040 Protein denotes TK
T6255 990-1000 Protein denotes luciferase
T6254 1159-1161 Protein denotes TK
T6253 1131-1138 Protein denotes C/EBP-β
T6252 808-818 Protein denotes Luciferase
T6251 762-772 Protein denotes Luciferase
T6250 154-156 Protein denotes TK
T6249 136-152 Protein denotes thymidine kinase
T6248 81-91 Protein denotes luciferase
R4487 T6253 T6258 themeOf C/EBP-β,co-transfected
R4488 T6253 T6259 causeOf C/EBP-β,affected
R4489 T6254 T6259 themeOf TK,affected

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6300 1116-1130 Gene_expression denotes co-transfected
T6299 1049-1059 Protein denotes luciferase
T6298 1038-1040 Protein denotes TK
T6297 990-1000 Protein denotes luciferase
T6296 1159-1161 Protein denotes TK
T6295 1131-1138 Protein denotes C/EBP-β
T6294 808-818 Protein denotes Luciferase
T6293 762-772 Protein denotes Luciferase
T6292 154-156 Protein denotes TK
T6291 136-152 Protein denotes thymidine kinase
T6290 81-91 Protein denotes luciferase
R4493 T6295 T6300 themeOf C/EBP-β,co-transfected

DLUT931

Id Subject Object Predicate Lexical cue
T6277 1116-1130 Gene_expression denotes co-transfected
T6276 1049-1059 Protein denotes luciferase
T6275 1038-1040 Protein denotes TK
T6274 990-1000 Protein denotes luciferase
T6273 1159-1161 Protein denotes TK
T6272 1131-1138 Protein denotes C/EBP-β
T6271 808-818 Protein denotes Luciferase
T6270 762-772 Protein denotes Luciferase
T6269 154-156 Protein denotes TK
T6268 136-152 Protein denotes thymidine kinase
T6267 81-91 Protein denotes luciferase
R4490 T6272 T6277 themeOf C/EBP-β,co-transfected
R4491 T6274 T6277 themeOf luciferase,co-transfected

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T6350 466-474 Entity denotes promoter
T6348 736-760 Entity denotes absence of 100 ng/ml LPS
T6347 1228-1254 Protein denotes protein microassay reagent
T6346 81-91 Protein denotes luciferase
T6345 132-145 Protein denotes pRL-thymidine
T6344 339-356 Entity denotes the SV40 promoter
T6342 610-634 Entity denotes two identical cell pools
T6341 1038-1040 Protein denotes TK
T6340 1228-1254 Entity denotes protein microassay reagent
T6339 1173-1194 Entity denotes Protein concentration
T6338 132-145 Entity denotes pRL-thymidine
T6337 1078-1094 Protein denotes cellular protein
T6336 982-1000 Protein denotes firefly luciferase
T6335 234-248 Protein denotes a Bio-Rad Gene
T6355 1142-1145 Entity denotes LPS
T6354 1049-1059 Protein denotes luciferase
T6353 1034-1040 Protein denotes pRL-TK
T6352 136-145 Entity denotes thymidine
T6351 1155-1161 Protein denotes pRL-TK
T6367 1110-1170 Regulation denotes where co-transfected C/EBP-β or LPS affected pRL-TK activity
T6366 1110-1170 Regulation denotes where co-transfected C/EBP-β or LPS affected pRL-TK activity
T6365 1034-1040 Protein denotes pRL-TK
T6364 500-517 Entity denotes Transfected cells
T6363 154-156 Protein denotes TK
T6362 1116-1138 Protein denotes co-transfected C/EBP-β
T6361 128-157 Protein denotes the pRL-thymidine kinase (TK)
T6360 639-667 Protein denotes incubated 16 hrs in a 5% CO2
T6359 1155-1161 Protein denotes pRL-TK
T6358 934-942 Entity denotes Promoter
T6357 762-772 Protein denotes Luciferase
T6356 801-833 Protein denotes a Dual-Luciferase Reporter Assay
R4504 T6355 T6367 causeOf LPS,where co-transfected C/EBP-β or LPS affected pRL-TK activity
R4505 T6362 T6366 causeOf co-transfected C/EBP-β,where co-transfected C/EBP-β or LPS affected pRL-TK activity

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6317 1224-1227 Protein denotes Rad
T6316 1146-1154 Regulation denotes affected
T6315 1146-1154 Regulation denotes affected
T6314 955-964 Gene_expression denotes expressed
T6313 1159-1161 Protein denotes TK
T6312 1155-1158 Protein denotes pRL
T6311 1131-1138 Protein denotes C/EBP-β
T6310 1038-1071 Protein denotes TK renilla luciferase light units
T6309 1034-1037 Protein denotes pRL
T6308 990-1000 Protein denotes luciferase
T6307 808-818 Protein denotes Luciferase
T6306 762-772 Protein denotes Luciferase
T6305 343-356 Protein denotes SV40 promoter
T6304 154-156 Protein denotes TK
T6303 132-152 Protein denotes pRL-thymidine kinase
T6302 81-91 Protein denotes luciferase
R4494 T6308 T6314 themeOf luciferase,expressed
R4495 T6311 T6315 causeOf C/EBP-β,affected
R4496 T6311 T6316 causeOf C/EBP-β,affected
R4497 T6312 T6315 themeOf pRL,affected
R4498 T6313 T6316 themeOf TK,affected

testone

Id Subject Object Predicate Lexical cue
T5939 1146-1154 Regulation denotes affected
T5938 1116-1130 Gene_expression denotes co-transfected
T5937 955-964 Gene_expression denotes expressed
T5936 1159-1161 Protein denotes TK
T5935 1131-1138 Protein denotes C/EBP-β
T5934 1049-1059 Protein denotes luciferase
T5933 1038-1040 Protein denotes TK
T5932 990-1000 Protein denotes luciferase
T5931 808-818 Protein denotes Luciferase
T5930 762-772 Protein denotes Luciferase
T5929 154-156 Protein denotes TK
T5928 136-152 Protein denotes thymidine kinase
T5927 81-91 Protein denotes luciferase
R4256 T5929 T5928 equivalentTo TK,thymidine kinase
R4257 T5932 T5938 themeOf luciferase,co-transfected
R4258 T5932 T5937 themeOf luciferase,expressed
R4259 T5934 T5938 themeOf luciferase,co-transfected
R4260 T5934 T5937 themeOf luciferase,expressed
R4261 T5935 T5938 themeOf C/EBP-β,co-transfected
R4262 T5938 T5939 themeOf co-transfected,affected

test3

Id Subject Object Predicate Lexical cue
T5963 1159-1161 Protein denotes TK
T5962 1131-1138 Protein denotes C/EBP-β
T5961 1119-1130 Gene_expression denotes transfected
T5960 1049-1059 Protein denotes luciferase
T5959 1038-1040 Protein denotes TK
T5958 990-1000 Protein denotes luciferase
T5957 955-964 Gene_expression denotes expressed
T5956 808-818 Protein denotes Luciferase
T5955 762-772 Protein denotes Luciferase
T5954 154-156 Protein denotes TK
T5953 136-152 Protein denotes thymidine kinase
T5952 81-91 Protein denotes luciferase
T5950 1159-1161 Protein denotes TK
T5949 1131-1138 Protein denotes C/EBP-β
T5948 1049-1059 Protein denotes luciferase
T5947 1038-1040 Protein denotes TK
T5946 990-1000 Protein denotes luciferase
T5945 808-818 Protein denotes Luciferase
T5944 762-772 Protein denotes Luciferase
T5943 154-156 Protein denotes TK
T5942 136-152 Protein denotes thymidine kinase
T5941 81-91 Protein denotes luciferase
R4263 T5954 T5953 equivalentTo TK,thymidine kinase
R4264 T5958 T5957 themeOf luciferase,expressed
R4265 T5960 T5957 themeOf luciferase,expressed
R4266 T5962 T5961 themeOf C/EBP-β,transfected