PMC:3586680 / 9638-9804 JSONTXT

Annnotations TAB JSON ListView MergeView

    test3

    {"project":"test3","denotations":[{"id":"T3752","span":{"begin":15,"end":19},"obj":"Protein"},{"id":"T3696","span":{"begin":15,"end":19},"obj":"Protein"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    testone

    {"project":"testone","denotations":[{"id":"T3623","span":{"begin":15,"end":19},"obj":"Protein"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T5426","span":{"begin":25,"end":33},"obj":"Negative_regulation"},{"id":"T5425","span":{"begin":0,"end":11},"obj":"Gene_expression"},{"id":"T5424","span":{"begin":15,"end":24},"obj":"Protein"}],"relations":[{"id":"R3767","pred":"themeOf","subj":"T5424","obj":"T5425"},{"id":"R3768","pred":"themeOf","subj":"T5425","obj":"T5426"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T6067","span":{"begin":165,"end":166},"obj":"."},{"id":"T6066","span":{"begin":164,"end":165},"obj":"-RRB-"},{"id":"T6065","span":{"begin":160,"end":164},"obj":"CD"},{"id":"T6064","span":{"begin":158,"end":159},"obj":","},{"id":"T6063","span":{"begin":155,"end":158},"obj":"FW"},{"id":"T6062","span":{"begin":152,"end":154},"obj":"FW"},{"id":"T6061","span":{"begin":147,"end":151},"obj":"NNP"},{"id":"T6060","span":{"begin":146,"end":147},"obj":"-LRB-"},{"id":"T6059","span":{"begin":139,"end":145},"obj":"NN"},{"id":"T6058","span":{"begin":130,"end":138},"obj":"NN"},{"id":"T6057","span":{"begin":126,"end":129},"obj":"CC"},{"id":"T6056","span":{"begin":124,"end":125},"obj":","},{"id":"T6055","span":{"begin":123,"end":124},"obj":"-RRB-"},{"id":"T6054","span":{"begin":119,"end":123},"obj":"CD"},{"id":"T6053","span":{"begin":117,"end":118},"obj":","},{"id":"T6052","span":{"begin":114,"end":117},"obj":"FW"},{"id":"T6051","span":{"begin":111,"end":113},"obj":"FW"},{"id":"T6050","span":{"begin":102,"end":110},"obj":"NNP"},{"id":"T6049","span":{"begin":101,"end":102},"obj":"-LRB-"},{"id":"T6048","span":{"begin":94,"end":100},"obj":"NN"},{"id":"T6047","span":{"begin":83,"end":93},"obj":"JJ"},{"id":"T6046","span":{"begin":81,"end":82},"obj":","},{"id":"T6045","span":{"begin":80,"end":81},"obj":"-RRB-"},{"id":"T6044","span":{"begin":76,"end":80},"obj":"CD"},{"id":"T6043","span":{"begin":74,"end":75},"obj":","},{"id":"T6042","span":{"begin":71,"end":74},"obj":"FW"},{"id":"T6041","span":{"begin":68,"end":70},"obj":"FW"},{"id":"T6040","span":{"begin":61,"end":67},"obj":"NNP"},{"id":"T6039","span":{"begin":60,"end":61},"obj":"-LRB-"},{"id":"T6038","span":{"begin":53,"end":59},"obj":"NN"},{"id":"T6037","span":{"begin":48,"end":52},"obj":"NN"},{"id":"T6036","span":{"begin":45,"end":47},"obj":"IN"},{"id":"T6035","span":{"begin":38,"end":44},"obj":"NN"},{"id":"T6034","span":{"begin":34,"end":37},"obj":"DT"},{"id":"T6033","span":{"begin":25,"end":33},"obj":"VBZ"},{"id":"T6032","span":{"begin":20,"end":24},"obj":"NN"},{"id":"T6031","span":{"begin":15,"end":19},"obj":"NNP"},{"id":"T6030","span":{"begin":12,"end":14},"obj":"IN"},{"id":"T6029","span":{"begin":0,"end":11},"obj":"NNP"}],"relations":[{"id":"R4054","pred":"nsubj","subj":"T6029","obj":"T6033"},{"id":"R4057","pred":"prep","subj":"T6030","obj":"T6029"},{"id":"R4061","pred":"compound","subj":"T6031","obj":"T6032"},{"id":"R4063","pred":"pobj","subj":"T6032","obj":"T6030"},{"id":"R4065","pred":"ROOT","subj":"T6033","obj":"T6033"},{"id":"R4067","pred":"det","subj":"T6034","obj":"T6035"},{"id":"R4071","pred":"dobj","subj":"T6035","obj":"T6033"},{"id":"R4078","pred":"prep","subj":"T6036","obj":"T6035"},{"id":"R4080","pred":"compound","subj":"T6037","obj":"T6038"},{"id":"R4082","pred":"pobj","subj":"T6038","obj":"T6036"},{"id":"R4083","pred":"punct","subj":"T6039","obj":"T6042"},{"id":"R4085","pred":"compound","subj":"T6040","obj":"T6042"},{"id":"R4086","pred":"nmod","subj":"T6041","obj":"T6042"},{"id":"R4088","pred":"appos","subj":"T6042","obj":"T6035"},{"id":"R4089","pred":"punct","subj":"T6043","obj":"T6042"},{"id":"R4091","pred":"npadvmod","subj":"T6044","obj":"T6042"},{"id":"R4093","pred":"punct","subj":"T6045","obj":"T6035"},{"id":"R4094","pred":"punct","subj":"T6046","obj":"T6035"},{"id":"R4095","pred":"compound","subj":"T6047","obj":"T6048"},{"id":"R4096","pred":"appos","subj":"T6048","obj":"T6035"},{"id":"R4098","pred":"punct","subj":"T6049","obj":"T6052"},{"id":"R4100","pred":"compound","subj":"T6050","obj":"T6052"},{"id":"R4101","pred":"nmod","subj":"T6051","obj":"T6052"},{"id":"R4104","pred":"appos","subj":"T6052","obj":"T6035"},{"id":"R4107","pred":"punct","subj":"T6053","obj":"T6052"},{"id":"R4111","pred":"npadvmod","subj":"T6054","obj":"T6052"},{"id":"R4114","pred":"punct","subj":"T6055","obj":"T6035"},{"id":"R4118","pred":"punct","subj":"T6056","obj":"T6033"},{"id":"R4124","pred":"cc","subj":"T6057","obj":"T6033"},{"id":"R4129","pred":"compound","subj":"T6058","obj":"T6059"},{"id":"R4133","pred":"conj","subj":"T6059","obj":"T6033"},{"id":"R4137","pred":"punct","subj":"T6060","obj":"T6063"},{"id":"R4140","pred":"nmod","subj":"T6061","obj":"T6063"},{"id":"R4144","pred":"nmod","subj":"T6062","obj":"T6063"},{"id":"R4148","pred":"parataxis","subj":"T6063","obj":"T6059"},{"id":"R4152","pred":"punct","subj":"T6064","obj":"T6063"},{"id":"R4155","pred":"npadvmod","subj":"T6065","obj":"T6063"},{"id":"R4159","pred":"punct","subj":"T6066","obj":"T6063"},{"id":"R4162","pred":"punct","subj":"T6067","obj":"T6033"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T5685","span":{"begin":0,"end":24},"obj":"Protein"},{"id":"T5618","span":{"begin":12,"end":19},"obj":"Protein"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T5179","span":{"begin":15,"end":19},"obj":"Protein"},{"id":"T5225","span":{"begin":0,"end":11},"obj":"Negative_regulation"}],"relations":[{"id":"R3640","pred":"themeOf","subj":"T5179","obj":"T5225"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T5377","span":{"begin":0,"end":11},"obj":"Positive_regulation"},{"id":"T5330","span":{"begin":15,"end":19},"obj":"Protein"}],"relations":[{"id":"R3703","pred":"themeOf","subj":"T5330","obj":"T5377"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T5104","span":{"begin":0,"end":11},"obj":"Negative_regulation"},{"id":"T5057","span":{"begin":15,"end":19},"obj":"Protein"}],"relations":[{"id":"R3604","pred":"themeOf","subj":"T5057","obj":"T5104"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T5145","span":{"begin":15,"end":19},"obj":"http://www.uniprot.org/uniprot/Q9NZC7"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T3980","span":{"begin":15,"end":19},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T4434","span":{"begin":164,"end":165},"obj":"-RRB-"},{"id":"T4433","span":{"begin":160,"end":164},"obj":"CD"},{"id":"T4432","span":{"begin":158,"end":159},"obj":"-COMMA-"},{"id":"T4431","span":{"begin":155,"end":158},"obj":"FW"},{"id":"T4430","span":{"begin":152,"end":154},"obj":"FW"},{"id":"T4429","span":{"begin":147,"end":151},"obj":"NNP"},{"id":"T4428","span":{"begin":146,"end":147},"obj":"-LRB-"},{"id":"T4427","span":{"begin":139,"end":145},"obj":"NN"},{"id":"T4426","span":{"begin":130,"end":138},"obj":"NN"},{"id":"T4425","span":{"begin":126,"end":129},"obj":"CC"},{"id":"T4424","span":{"begin":124,"end":125},"obj":"-COMMA-"},{"id":"T4423","span":{"begin":123,"end":124},"obj":"-RRB-"},{"id":"T4422","span":{"begin":119,"end":123},"obj":"CD"},{"id":"T4421","span":{"begin":117,"end":118},"obj":"-COMMA-"},{"id":"T4420","span":{"begin":114,"end":117},"obj":"FW"},{"id":"T4419","span":{"begin":111,"end":113},"obj":"FW"},{"id":"T4418","span":{"begin":102,"end":110},"obj":"NNP"},{"id":"T4417","span":{"begin":101,"end":102},"obj":"-LRB-"},{"id":"T4416","span":{"begin":94,"end":100},"obj":"NN"},{"id":"T4415","span":{"begin":83,"end":93},"obj":"JJ"},{"id":"T4414","span":{"begin":81,"end":82},"obj":"-COMMA-"},{"id":"T4413","span":{"begin":80,"end":81},"obj":"-RRB-"},{"id":"T4412","span":{"begin":76,"end":80},"obj":"CD"},{"id":"T4411","span":{"begin":74,"end":75},"obj":"-COMMA-"},{"id":"T4410","span":{"begin":71,"end":74},"obj":"FW"},{"id":"T4409","span":{"begin":68,"end":70},"obj":"FW"},{"id":"T4408","span":{"begin":61,"end":67},"obj":"NNP"},{"id":"T4407","span":{"begin":60,"end":61},"obj":"-LRB-"},{"id":"T4406","span":{"begin":53,"end":59},"obj":"NN"},{"id":"T4405","span":{"begin":48,"end":52},"obj":"NN"},{"id":"T4404","span":{"begin":45,"end":47},"obj":"IN"},{"id":"T4403","span":{"begin":38,"end":44},"obj":"NN"},{"id":"T4402","span":{"begin":34,"end":37},"obj":"DT"},{"id":"T4401","span":{"begin":25,"end":33},"obj":"VB"},{"id":"T4400","span":{"begin":20,"end":24},"obj":"NN"},{"id":"T4399","span":{"begin":15,"end":19},"obj":"NN"},{"id":"T4398","span":{"begin":12,"end":14},"obj":"IN"},{"id":"T4397","span":{"begin":0,"end":11},"obj":"NN"}],"relations":[{"id":"R3000","pred":"arg1Of","subj":"T4397","obj":"T4398"},{"id":"R3001","pred":"arg1Of","subj":"T4397","obj":"T4401"},{"id":"R3002","pred":"arg2Of","subj":"T4400","obj":"T4398"},{"id":"R3003","pred":"arg1Of","subj":"T4400","obj":"T4399"},{"id":"R3004","pred":"arg1Of","subj":"T4401","obj":"T4428"},{"id":"R3005","pred":"arg1Of","subj":"T4403","obj":"T4404"},{"id":"R3006","pred":"arg1Of","subj":"T4403","obj":"T4407"},{"id":"R3007","pred":"arg1Of","subj":"T4403","obj":"T4414"},{"id":"R3008","pred":"arg2Of","subj":"T4406","obj":"T4404"},{"id":"R3009","pred":"arg1Of","subj":"T4406","obj":"T4405"},{"id":"R3010","pred":"arg2Of","subj":"T4408","obj":"T4407"},{"id":"R3011","pred":"arg1Of","subj":"T4408","obj":"T4409"},{"id":"R3012","pred":"arg1Of","subj":"T4408","obj":"T4410"},{"id":"R3013","pred":"arg1Of","subj":"T4408","obj":"T4411"},{"id":"R3014","pred":"arg2Of","subj":"T4412","obj":"T4411"},{"id":"R3015","pred":"arg3Of","subj":"T4413","obj":"T4407"},{"id":"R3016","pred":"arg2Of","subj":"T4414","obj":"T4401"},{"id":"R3017","pred":"arg1Of","subj":"T4414","obj":"T4402"},{"id":"R3018","pred":"arg1Of","subj":"T4416","obj":"T4415"},{"id":"R3019","pred":"arg1Of","subj":"T4416","obj":"T4417"},{"id":"R3020","pred":"arg1Of","subj":"T4416","obj":"T4425"},{"id":"R3021","pred":"arg2Of","subj":"T4418","obj":"T4417"},{"id":"R3022","pred":"arg1Of","subj":"T4418","obj":"T4419"},{"id":"R3023","pred":"arg1Of","subj":"T4418","obj":"T4420"},{"id":"R3024","pred":"arg1Of","subj":"T4418","obj":"T4421"},{"id":"R3025","pred":"arg2Of","subj":"T4422","obj":"T4421"},{"id":"R3026","pred":"arg3Of","subj":"T4423","obj":"T4417"},{"id":"R3027","pred":"arg2Of","subj":"T4425","obj":"T4414"},{"id":"R3028","pred":"arg1Of","subj":"T4425","obj":"T4424"},{"id":"R3029","pred":"arg2Of","subj":"T4427","obj":"T4425"},{"id":"R3030","pred":"arg1Of","subj":"T4427","obj":"T4426"},{"id":"R3031","pred":"arg2Of","subj":"T4429","obj":"T4428"},{"id":"R3032","pred":"arg1Of","subj":"T4429","obj":"T4430"},{"id":"R3033","pred":"arg1Of","subj":"T4429","obj":"T4431"},{"id":"R3034","pred":"arg1Of","subj":"T4429","obj":"T4432"},{"id":"R3035","pred":"arg2Of","subj":"T4433","obj":"T4432"},{"id":"R3036","pred":"arg3Of","subj":"T4434","obj":"T4428"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    2_test

    {"project":"2_test","denotations":[{"id":"23459853-16223882-38778544","span":{"begin":76,"end":80},"obj":"16223882"},{"id":"23459853-18460020-38778545","span":{"begin":119,"end":123},"obj":"18460020"},{"id":"23459853-19484134-38778546","span":{"begin":160,"end":164},"obj":"19484134"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    UBERON-AE

    {"project":"UBERON-AE","denotations":[{"id":"T3816","span":{"begin":48,"end":52},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T4040","span":{"begin":38,"end":52},"obj":"http://purl.obolibrary.org/obo/GO_0060437"},{"id":"T4037","span":{"begin":38,"end":44},"obj":"http://purl.obolibrary.org/obo/GO_0040007"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T3829","span":{"begin":0,"end":166},"obj":"Sentence"},{"id":"T69","span":{"begin":0,"end":166},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}

    simple1

    {"project":"simple1","denotations":[{"id":"T4103","span":{"begin":15,"end":19},"obj":"Protein"}],"text":"Restoration of WWOX gene prevents the growth of lung cancer (Fabbri et al., 2005), pancreatic cancer (Nakayama et al., 2008), and prostate cancer (Hong et al., 2009)."}