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PMC:3586680 / 14985-15194 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T7465 193-200 Protein denotes Δ133p53
T7464 188-191 Protein denotes p53
T7463 106-109 Protein denotes p53
T7462 92-102 Gene_expression denotes expression
T7442 193-200 Protein denotes Δ133p53
T7441 188-191 Protein denotes p53
T7440 106-109 Protein denotes p53
R5199 T7463 T7462 themeOf p53,expression

testone

Id Subject Object Predicate Lexical cue
T7417 193-200 Protein denotes Δ133p53
T7416 188-191 Protein denotes p53
T7415 106-109 Protein denotes p53

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7947 176-200 Protein denotes Full-length p53, Δ133p53
T7946 92-102 Gene_expression denotes expression
T7945 106-118 Protein denotes p53 isoforms
R5495 T7945 T7946 themeOf p53 isoforms,expression

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8058 202-205 CC denotes and
T8057 200-201 , denotes ,
T8056 193-200 NNP denotes Δ133p53
T8055 191-192 , denotes ,
T8054 188-191 NN denotes p53
T8053 176-187 JJ denotes Full-length
T8052 174-175 . denotes .
T8051 173-174 -RRB- denotes )
T8050 169-173 CD denotes 2007
T8049 167-168 , denotes ,
T8048 160-167 NNP denotes Bourdon
T8047 158-159 : denotes ;
T8046 154-158 CD denotes 2005
T8045 152-153 , denotes ,
T8044 149-152 FW denotes al.
T8043 146-148 FW denotes et
T8042 138-145 NNP denotes Bourdon
T8041 137-138 -LRB- denotes (
T8040 126-136 RB denotes frequently
T8039 119-125 VBZ denotes occurs
T8038 110-118 NNS denotes isoforms
T8037 106-109 NN denotes p53
T8036 103-105 IN denotes of
T8035 92-102 NN denotes expression
T8034 83-91 JJ denotes aberrant
T8033 81-82 , denotes ,
T8032 74-81 NNS denotes cancers
T8031 71-73 IN denotes In
T8030 69-70 . denotes .
T8029 68-69 -RRB- denotes )
T8028 67-68 CD denotes 2
T8027 60-66 NN denotes Figure
T8026 58-59 : denotes ;
T8025 54-58 CD denotes 2006
T8024 52-53 , denotes ,
T8023 49-52 FW denotes al.
T8022 46-48 FW denotes et
T8021 42-45 NNP denotes Ray
T8020 40-41 : denotes ;
T8019 36-40 CD denotes 2004
T8018 34-35 , denotes ,
T8017 31-34 FW denotes al.
T8016 28-30 FW denotes et
T8015 22-27 NNP denotes Ghosh
T8014 21-22 -LRB- denotes (
T8013 9-20 NN denotes translation
T8012 6-8 IN denotes of
T8011 0-5 NNS denotes sites
R5550 T8012 T8011 prep of,sites
R5551 T8013 T8012 pobj translation,of
R5553 T8015 T8017 compound Ghosh,al.
R5554 T8016 T8017 nmod et,al.
R5556 T8018 T8017 punct ",",al.
R5557 T8019 T8017 appos 2004,al.
R5559 T8021 T8023 compound Ray,al.
R5560 T8022 T8023 nmod et,al.
R5562 T8024 T8023 punct ",",al.
R5563 T8025 T8023 appos 2006,al.
R5564 T8026 T8023 punct ;,al.
R5565 T8027 T8023 appos Figure,al.
R5566 T8028 T8027 nummod 2,Figure
R5567 T8029 T8023 punct ),al.
R5569 T8031 T8039 prep In,occurs
R5570 T8032 T8031 pobj cancers,In
R5571 T8033 T8035 punct ",",expression
R5572 T8034 T8035 amod aberrant,expression
R5573 T8035 T8039 nsubj expression,occurs
R5574 T8036 T8035 prep of,expression
R5575 T8037 T8038 compound p53,isoforms
R5576 T8038 T8036 pobj isoforms,of
R5577 T8039 T8039 ROOT occurs,occurs
R5578 T8040 T8039 advmod frequently,occurs
R5579 T8041 T8044 punct (,al.
R5580 T8042 T8044 nmod Bourdon,al.
R5581 T8043 T8044 nmod et,al.
R5582 T8044 T8039 parataxis al.,occurs
R5583 T8045 T8044 punct ",",al.
R5584 T8046 T8044 npadvmod 2005,al.
R5585 T8047 T8048 punct ;,Bourdon
R5586 T8048 T8039 nsubj Bourdon,occurs
R5587 T8049 T8048 punct ",",Bourdon
R5588 T8050 T8048 npadvmod 2007,Bourdon
R5589 T8051 T8048 punct ),Bourdon
R5590 T8052 T8039 punct .,occurs
R5591 T8053 T8054 amod Full-length,p53
R5593 T8055 T8054 punct ",",p53
R5594 T8056 T8054 conj Δ133p53,p53
R5595 T8057 T8056 punct ",",Δ133p53
R5596 T8058 T8056 cc and,Δ133p53

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8244 42-45 Protein denotes Ray
T8243 103-118 Protein denotes of p53 isoforms
T8237 176-191 Protein denotes Full-length p53
T8223 193-200 Protein denotes Δ133p53
T8221 176-191 Protein denotes Full-length p53

DLUT931

Id Subject Object Predicate Lexical cue
T7877 92-102 Gene_expression denotes expression
T7858 193-200 Protein denotes Δ133p53
T7857 188-191 Protein denotes p53
T7856 106-109 Protein denotes p53
R5448 T7856 T7877 themeOf p53,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T7935 92-102 Gene_expression denotes expression
T7916 193-200 Protein denotes Δ133p53
T7915 188-191 Protein denotes p53
T7914 106-109 Protein denotes p53
R5478 T7914 T7935 themeOf p53,expression

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7814 92-102 Gene_expression denotes expression
T7795 193-200 Protein denotes Δ133p53
T7794 188-191 Protein denotes p53
T7793 106-109 Protein denotes p53
R5426 T7793 T7814 themeOf p53,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7825 188-191 http://www.uniprot.org/uniprot/P04637 denotes p53
T7824 106-109 http://www.uniprot.org/uniprot/P04637 denotes p53

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T7555 193-200 Protein denotes Δ133p53
T7554 188-191 Protein denotes p53
T7553 106-109 Protein denotes p53

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T7550 193-200 Antecedent denotes Δ133p53
T7549 188-191 Antecedent denotes p53

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7687 202-205 CC denotes and
T7686 200-201 -COMMA- denotes ,
T7685 193-200 NN denotes Δ133p53
T7684 191-192 -COMMA- denotes ,
T7683 188-191 NN denotes p53
T7682 176-187 JJ denotes Full-length
T7681 173-174 -RRB- denotes )
T7680 169-173 CD denotes 2007
T7679 167-168 -COMMA- denotes ,
T7678 160-167 NNP denotes Bourdon
T7677 158-159 -COLON- denotes ;
T7676 154-158 CD denotes 2005
T7675 152-153 -COMMA- denotes ,
T7674 149-152 FW denotes al.
T7673 146-148 FW denotes et
T7672 138-145 NNP denotes Bourdon
T7671 137-138 -LRB- denotes (
T7670 126-136 RB denotes frequently
T7669 119-125 VB denotes occurs
T7668 110-118 NN denotes isoforms
T7667 106-109 NN denotes p53
T7666 103-105 IN denotes of
T7665 92-102 NN denotes expression
T7664 83-91 JJ denotes aberrant
T7663 81-82 -COMMA- denotes ,
T7662 74-81 NN denotes cancers
T7661 71-73 IN denotes In
T7660 68-69 -RRB- denotes )
T7659 67-68 CD denotes 2
T7658 60-66 NN denotes Figure
T7657 58-59 -COLON- denotes ;
T7656 54-58 CD denotes 2006
T7655 52-53 -COMMA- denotes ,
T7654 49-52 FW denotes al.
T7653 46-48 FW denotes et
T7652 42-45 NNP denotes Ray
T7651 40-41 -COLON- denotes ;
T7650 36-40 CD denotes 2004
T7649 34-35 -COMMA- denotes ,
T7648 31-34 FW denotes al.
T7647 28-30 FW denotes et
T7646 22-27 NNP denotes Ghosh
T7645 21-22 -LRB- denotes (
T7644 9-20 NN denotes translation
T7643 6-8 IN denotes of
T7642 0-5 NN denotes sites
R5275 T7642 T7643 arg1Of sites,of
R5276 T7644 T7643 arg2Of translation,of
R5277 T7646 T7645 arg2Of Ghosh,(
R5278 T7646 T7647 arg1Of Ghosh,et
R5279 T7646 T7648 arg1Of Ghosh,al.
R5280 T7646 T7649 arg1Of Ghosh,","
R5281 T7646 T7651 arg1Of Ghosh,;
R5282 T7646 T7657 arg1Of Ghosh,;
R5283 T7650 T7649 arg2Of 2004,","
R5284 T7652 T7653 arg1Of Ray,et
R5285 T7652 T7654 arg1Of Ray,al.
R5286 T7652 T7655 arg1Of Ray,","
R5287 T7655 T7651 arg2Of ",",;
R5288 T7656 T7655 arg2Of 2006,","
R5289 T7658 T7657 arg2Of Figure,;
R5290 T7658 T7659 arg1Of Figure,2
R5291 T7660 T7645 arg3Of ),(
R5292 T7662 T7661 arg2Of cancers,In
R5293 T7665 T7664 arg1Of expression,aberrant
R5294 T7665 T7666 arg1Of expression,of
R5295 T7665 T7669 arg1Of expression,occurs
R5296 T7668 T7666 arg2Of isoforms,of
R5297 T7668 T7667 arg1Of isoforms,p53
R5298 T7669 T7661 arg1Of occurs,In
R5299 T7669 T7663 arg1Of occurs,","
R5300 T7669 T7670 arg1Of occurs,frequently
R5301 T7669 T7671 arg1Of occurs,(
R5302 T7672 T7671 arg2Of Bourdon,(
R5303 T7672 T7673 arg1Of Bourdon,et
R5304 T7672 T7674 arg1Of Bourdon,al.
R5305 T7672 T7675 arg1Of Bourdon,","
R5306 T7672 T7677 arg1Of Bourdon,;
R5307 T7676 T7675 arg2Of 2005,","
R5308 T7678 T7677 arg2Of Bourdon,;
R5309 T7678 T7679 arg1Of Bourdon,","
R5310 T7680 T7679 arg2Of 2007,","
R5311 T7681 T7671 arg3Of ),(
R5312 T7683 T7682 arg1Of p53,Full-length
R5313 T7683 T7684 arg1Of p53,","
R5314 T7684 T7687 arg1Of ",",and
R5315 T7685 T7684 arg2Of Δ133p53,","
R5316 T7687 T7686 arg1Of and,","

2_test

Id Subject Object Predicate Lexical cue
23459853-15340061-38778576 36-40 15340061 denotes 2004
23459853-16440000-38778577 54-58 16440000 denotes 2006
23459853-16131611-38778578 154-158 16131611 denotes 2005
23459853-17637683-38778579 169-173 17637683 denotes 2007

GO-BP

Id Subject Object Predicate Lexical cue
T7580 9-20 http://purl.obolibrary.org/obo/GO_0006412 denotes translation

sentences

Id Subject Object Predicate Lexical cue
T7492 71-175 Sentence denotes In cancers, aberrant expression of p53 isoforms occurs frequently (Bourdon et al., 2005; Bourdon, 2007).
T105 71-175 Sentence denotes In cancers, aberrant expression of p53 isoforms occurs frequently (Bourdon et al., 2005; Bourdon, 2007).

simple1

Id Subject Object Predicate Lexical cue
T7601 193-200 Protein denotes Δ133p53
T7600 188-191 Protein denotes p53
T7599 106-109 Protein denotes p53