> top > docs > PMC:3586680 > spans > 14848-15817 > annotations

PMC:3586680 / 14848-15817 JSONTXT

Annnotations TAB JSON ListView MergeView

test3

Id Subject Object Predicate Lexical cue
T7490 933-936 Protein denotes Bax
T7489 925-928 Protein denotes p21
T7488 897-912 Transcription denotes transcriptional
T7487 893-896 Protein denotes p53
T7486 886-892 Regulation denotes affect
T7485 873-876 Protein denotes p53
T7484 859-867 Protein denotes Δ133p53γ
T7483 847-855 Protein denotes Δ133p53β
T7482 833-843 Gene_expression denotes expression
T7481 830-833 Gene_expression denotes Co-
T7480 767-770 Protein denotes p53
T7479 715-722 Protein denotes Δ133p53
T7478 668-671 Protein denotes p53
T7477 649-656 Protein denotes Δ133p53
T7476 640-643 Protein denotes p53
T7475 626-636 Gene_expression denotes expression
T7474 623-626 Gene_expression denotes co-
T7473 591-594 Protein denotes p53
T7472 576-580 Protein denotes p53β
T7471 568-571 Protein denotes p53
T7470 486-494 Protein denotes Δ133p53γ
T7469 463-470 Entity denotes nucleus
T7468 433-441 Protein denotes Δ133p53β
T7467 424-428 Protein denotes p53γ
T7466 343-347 Protein denotes p53β
T7465 330-337 Protein denotes Δ133p53
T7464 325-328 Protein denotes p53
T7463 243-246 Protein denotes p53
T7462 229-239 Gene_expression denotes expression
T7461 26-29 Protein denotes p53
T7460 933-936 Protein denotes Bax
T7459 925-928 Protein denotes p21
T7458 893-896 Protein denotes p53
T7457 873-876 Protein denotes p53
T7456 859-867 Protein denotes Δ133p53γ
T7455 847-855 Protein denotes Δ133p53β
T7454 767-770 Protein denotes p53
T7453 715-722 Protein denotes Δ133p53
T7452 668-671 Protein denotes p53
T7451 649-656 Protein denotes Δ133p53
T7450 640-643 Protein denotes p53
T7449 591-594 Protein denotes p53
T7448 576-580 Protein denotes p53β
T7447 568-571 Protein denotes p53
T7446 486-494 Protein denotes Δ133p53γ
T7445 433-441 Protein denotes Δ133p53β
T7444 424-428 Protein denotes p53γ
T7443 343-347 Protein denotes p53β
T7442 330-337 Protein denotes Δ133p53
T7441 325-328 Protein denotes p53
T7440 243-246 Protein denotes p53
T7439 26-29 Protein denotes p53
R5199 T7463 T7462 themeOf p53,expression
R5200 T7483 T7482 themeOf Δ133p53β,expression
R5201 T7484 T7482 themeOf Δ133p53γ,expression
R5202 T7487 T7488 themeOf p53,transcriptional
R5203 T7488 T7486 themeOf transcriptional,affect

testone

Id Subject Object Predicate Lexical cue
T7438 830-843 Gene_expression denotes Co-expression
T7437 623-636 Gene_expression denotes co-expression
T7436 498-507 Localization denotes localized
T7435 933-936 Protein denotes Bax
T7434 925-928 Protein denotes p21
T7433 893-896 Protein denotes p53
T7432 873-876 Protein denotes p53
T7431 859-867 Protein denotes Δ133p53γ
T7430 847-855 Protein denotes Δ133p53β
T7429 767-770 Protein denotes p53
T7428 715-722 Protein denotes Δ133p53
T7427 668-671 Protein denotes p53
T7426 649-656 Protein denotes Δ133p53
T7425 640-643 Protein denotes p53
T7424 591-594 Protein denotes p53
T7423 576-580 Protein denotes p53β
T7422 568-571 Protein denotes p53
T7421 486-494 Protein denotes Δ133p53γ
T7420 433-441 Protein denotes Δ133p53β
T7419 424-428 Protein denotes p53γ
T7418 343-347 Protein denotes p53β
T7417 330-337 Protein denotes Δ133p53
T7416 325-328 Protein denotes p53
T7415 243-246 Protein denotes p53
T7414 26-29 Protein denotes p53
R5193 T7421 T7436 themeOf Δ133p53γ,localized
R5194 T7425 T7437 themeOf p53,co-expression
R5195 T7426 T7437 themeOf Δ133p53,co-expression
R5196 T7430 T7438 themeOf Δ133p53β,Co-expression
R5197 T7431 T7438 themeOf Δ133p53γ,Co-expression
R5198 T7432 T7438 themeOf p53,Co-expression

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7988 886-892 Regulation denotes affect
T7987 886-892 Regulation denotes affect
T7986 830-843 Gene_expression denotes Co-expression
T7985 830-843 Gene_expression denotes Co-expression
T7984 933-946 Protein denotes Bax promoters
T7983 925-928 Protein denotes p21
T7982 893-896 Protein denotes p53
T7981 873-876 Protein denotes p53
T7980 847-855 Protein denotes Δ133p53β
T7979 767-770 Protein denotes p53
T7978 715-722 Protein denotes Δ133p53
T7977 623-636 Gene_expression denotes co-expression
T7976 623-636 Gene_expression denotes co-expression
T7975 581-590 Positive_regulation denotes increases
T7974 581-590 Positive_regulation denotes increases
T7973 581-590 Positive_regulation denotes increases
T7972 581-590 Positive_regulation denotes increases
T7971 549-564 Positive_regulation denotes Co-transfection
T7970 549-564 Positive_regulation denotes Co-transfection
T7969 549-564 Gene_expression denotes Co-transfection
T7968 549-564 Gene_expression denotes Co-transfection
T7967 668-671 Protein denotes p53
T7966 649-656 Protein denotes Δ133p53
T7965 640-643 Protein denotes p53
T7964 591-594 Protein denotes p53
T7963 576-580 Protein denotes p53β
T7962 568-571 Protein denotes p53
T7961 498-507 Localization denotes localized
T7960 486-494 Protein denotes Δ133p53γ
T7959 446-455 Localization denotes localized
T7958 446-455 Localization denotes localized
T7957 446-455 Localization denotes localized
T7956 446-455 Localization denotes localized
T7955 475-484 Entity denotes cytoplasm
T7954 463-470 Entity denotes nucleus
T7953 433-441 Protein denotes Δ133p53β
T7952 424-428 Protein denotes p53γ
T7951 352-361 Localization denotes localized
T7950 352-361 Localization denotes localized
T7949 376-383 Entity denotes nucleus
T7948 343-347 Protein denotes p53β
T7947 313-337 Protein denotes Full-length p53, Δ133p53
T7946 229-239 Gene_expression denotes expression
T7945 243-255 Protein denotes p53 isoforms
T7944 26-29 Protein denotes p53
R5495 T7945 T7946 themeOf p53 isoforms,expression
R5496 T7947 T7950 themeOf "Full-length p53, Δ133p53",localized
R5497 T7948 T7951 themeOf p53β,localized
R5498 T7949 T7950 locationOf nucleus,localized
R5499 T7949 T7951 locationOf nucleus,localized
R5500 T7952 T7956 themeOf p53γ,localized
R5501 T7952 T7958 themeOf p53γ,localized
R5502 T7953 T7957 themeOf Δ133p53β,localized
R5503 T7953 T7959 themeOf Δ133p53β,localized
R5504 T7954 T7956 locationOf nucleus,localized
R5505 T7954 T7957 locationOf nucleus,localized
R5506 T7955 T7958 locationOf cytoplasm,localized
R5507 T7955 T7959 locationOf cytoplasm,localized
R5508 T7960 T7961 themeOf Δ133p53γ,localized
R5509 T7962 T7968 themeOf p53,Co-transfection
R5510 T7963 T7969 themeOf p53β,Co-transfection
R5511 T7965 T7976 themeOf p53,co-expression
R5512 T7966 T7977 themeOf Δ133p53,co-expression
R5513 T7968 T7970 themeOf Co-transfection,Co-transfection
R5514 T7968 T7972 themeOf Co-transfection,increases
R5515 T7968 T7974 themeOf Co-transfection,increases
R5516 T7969 T7971 themeOf Co-transfection,Co-transfection
R5517 T7969 T7973 themeOf Co-transfection,increases
R5518 T7969 T7975 themeOf Co-transfection,increases
R5519 T7970 T7972 causeOf Co-transfection,increases
R5520 T7970 T7973 causeOf Co-transfection,increases
R5521 T7971 T7974 causeOf Co-transfection,increases
R5522 T7971 T7975 causeOf Co-transfection,increases
R5523 T7980 T7985 themeOf Δ133p53β,Co-expression
R5524 T7981 T7986 themeOf p53,Co-expression
R5525 T7985 T7987 themeOf Co-expression,affect
R5526 T7986 T7988 themeOf Co-expression,affect

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7999 55-57 TO denotes to
T7998 51-54 JJ denotes due
T7997 40-50 VBN denotes identified
T7996 35-39 VBN denotes been
T7995 30-34 VBP denotes have
T7994 26-29 NN denotes p53
T7993 23-25 IN denotes of
T7992 14-22 NNS denotes isoforms
T7991 9-13 CD denotes nine
T7990 3-8 JJS denotes least
T7989 0-2 IN denotes At
T8169 968-969 . denotes .
T8168 959-968 NN denotes apoptosis
T8167 956-958 IN denotes as
T8166 951-955 RB denotes well
T8165 948-950 RB denotes as
T8164 946-947 , denotes ,
T8163 937-946 NNS denotes promoters
T8162 933-936 NNP denotes Bax
T8161 929-932 CC denotes and
T8160 925-928 CD denotes p21
T8159 922-924 IN denotes on
T8158 913-921 NN denotes activity
T8157 897-912 JJ denotes transcriptional
T8156 893-896 NN denotes p53
T8155 886-892 VB denotes affect
T8154 882-885 RB denotes not
T8153 877-881 VBZ denotes does
T8152 873-876 NN denotes p53
T8151 868-872 IN denotes with
T8150 859-867 NNP denotes Δ133p53γ
T8149 856-858 CC denotes or
T8148 847-855 NNP denotes Δ133p53β
T8147 844-846 IN denotes of
T8146 830-843 NN denotes Co-expression
T8145 828-829 . denotes .
T8144 827-828 -RRB- denotes )
T8143 823-827 CD denotes 2011
T8142 821-822 , denotes ,
T8141 818-821 FW denotes al.
T8140 815-817 FW denotes et
T8139 807-814 NNP denotes Aoubala
T8138 806-807 -LRB- denotes (
T8137 798-805 NNS denotes manners
T8136 786-797 JJ denotes independent
T8135 785-786 : denotes -
T8134 781-784 CC denotes and
T8133 767-780 JJ denotes p53-dependent
T8132 764-766 IN denotes in
T8131 753-763 NN denotes expression
T8130 748-752 NN denotes gene
T8129 738-747 VBZ denotes regulates
T8128 723-737 RB denotes differentially
T8127 715-722 JJ denotes Δ133p53
T8126 713-714 . denotes .
T8125 712-713 -RRB- denotes )
T8124 708-712 CD denotes 2005
T8123 706-707 , denotes ,
T8122 703-706 FW denotes al.
T8121 700-702 FW denotes et
T8120 692-699 NNP denotes Bourdon
T8119 691-692 -LRB- denotes (
T8118 681-690 NN denotes apoptosis
T8117 668-680 JJ denotes p53-mediated
T8116 657-667 NNS denotes suppresses
T8115 649-656 JJ denotes Δ133p53
T8114 644-648 IN denotes with
T8113 640-643 NN denotes p53
T8112 637-639 IN denotes of
T8111 623-636 NN denotes co-expression
T8110 615-622 IN denotes whereas
T8109 613-614 , denotes ,
T8108 604-613 NN denotes apoptosis
T8107 591-603 JJ denotes p53-mediated
T8106 581-590 NNS denotes increases
T8105 576-580 JJ denotes p53β
T8104 572-575 CC denotes and
T8103 568-571 NN denotes p53
T8102 565-567 IN denotes of
T8101 549-564 NN denotes Co-transfection
T8100 547-548 . denotes .
T8099 546-547 -RRB- denotes )
T8098 542-546 CD denotes 2005
T8097 540-541 , denotes ,
T8096 537-540 FW denotes al.
T8095 534-536 FW denotes et
T8094 526-533 NNP denotes Bourdon
T8093 525-526 -LRB- denotes (
T8092 515-524 NN denotes cytoplasm
T8091 511-514 DT denotes the
T8090 508-510 IN denotes in
T8089 498-507 VBN denotes localized
T8088 495-497 VBZ denotes is
T8087 486-494 NNP denotes Δ133p53γ
T8086 484-485 . denotes .
T8085 475-484 NN denotes cytoplasm
T8084 471-474 CC denotes and
T8083 463-470 NN denotes nucleus
T8082 459-462 DT denotes the
T8081 456-458 IN denotes in
T8080 446-455 VBN denotes localized
T8079 442-445 VBP denotes are
T8078 433-441 NNP denotes Δ133p53β
T8077 429-432 CC denotes and
T8076 424-428 CD denotes p53γ
T8075 422-423 . denotes .
T8074 413-422 NN denotes cytoplasm
T8073 410-412 IN denotes in
T8072 406-409 VBP denotes are
T8071 401-405 PRP denotes them
T8070 398-400 IN denotes of
T8069 394-397 JJ denotes few
T8068 389-393 RB denotes only
T8067 385-388 CC denotes and
T8066 383-384 , denotes ,
T8065 376-383 NN denotes nucleus
T8064 372-375 DT denotes the
T8063 369-371 IN denotes in
T8062 362-368 RB denotes mainly
T8061 352-361 VBN denotes localized
T8060 348-351 VBP denotes are
T8059 343-347 CD denotes p53β
T8058 339-342 CC denotes and
T8057 337-338 , denotes ,
T8056 330-337 NNP denotes Δ133p53
T8055 328-329 , denotes ,
T8054 325-328 NN denotes p53
T8053 313-324 JJ denotes Full-length
T8052 311-312 . denotes .
T8051 310-311 -RRB- denotes )
T8050 306-310 CD denotes 2007
T8049 304-305 , denotes ,
T8048 297-304 NNP denotes Bourdon
T8047 295-296 : denotes ;
T8046 291-295 CD denotes 2005
T8045 289-290 , denotes ,
T8044 286-289 FW denotes al.
T8043 283-285 FW denotes et
T8042 275-282 NNP denotes Bourdon
T8041 274-275 -LRB- denotes (
T8040 263-273 RB denotes frequently
T8039 256-262 VBZ denotes occurs
T8038 247-255 NNS denotes isoforms
T8037 243-246 NN denotes p53
T8036 240-242 IN denotes of
T8035 229-239 NN denotes expression
T8034 220-228 JJ denotes aberrant
T8033 218-219 , denotes ,
T8032 211-218 NNS denotes cancers
T8031 208-210 IN denotes In
T8030 206-207 . denotes .
T8029 205-206 -RRB- denotes )
T8028 204-205 CD denotes 2
T8027 197-203 NN denotes Figure
T8026 195-196 : denotes ;
T8025 191-195 CD denotes 2006
T8024 189-190 , denotes ,
T8023 186-189 FW denotes al.
T8022 183-185 FW denotes et
T8021 179-182 NNP denotes Ray
T8020 177-178 : denotes ;
T8019 173-177 CD denotes 2004
T8018 171-172 , denotes ,
T8017 168-171 FW denotes al.
T8016 165-167 FW denotes et
T8015 159-164 NNP denotes Ghosh
T8014 158-159 -LRB- denotes (
T8013 146-157 NN denotes translation
T8012 143-145 IN denotes of
T8011 137-142 NNS denotes sites
T8010 126-136 NN denotes initiation
T8009 114-125 JJ denotes alternative
T8008 110-113 CC denotes and
T8007 108-109 , denotes ,
T8006 99-108 NNS denotes promoters
T8005 94-98 NN denotes gene
T8004 85-93 JJ denotes multiple
T8003 83-84 , denotes ,
T8002 75-83 NN denotes splicing
T8001 70-74 NNP denotes mRNA
T8000 58-69 JJ denotes alternative
R5527 T7989 T7990 advmod At,least
R5528 T7990 T7991 advmod least,nine
R5529 T7991 T7992 nummod nine,isoforms
R5530 T7992 T7997 nsubjpass isoforms,identified
R5531 T7993 T7992 prep of,isoforms
R5532 T7994 T7993 pobj p53,of
R5533 T7995 T7997 aux have,identified
R5534 T7996 T7997 auxpass been,identified
R5535 T7997 T7997 ROOT identified,identified
R5536 T7998 T8002 amod due,splicing
R5537 T7999 T8000 aux to,alternative
R5538 T8000 T7998 xcomp alternative,due
R5539 T8001 T8002 compound mRNA,splicing
R5540 T8002 T7997 dobj splicing,identified
R5541 T8003 T8002 punct ",",splicing
R5542 T8004 T8006 amod multiple,promoters
R5543 T8005 T8006 compound gene,promoters
R5544 T8006 T8002 conj promoters,splicing
R5545 T8007 T8006 punct ",",promoters
R5546 T8008 T8006 cc and,promoters
R5547 T8009 T8011 amod alternative,sites
R5548 T8010 T8011 compound initiation,sites
R5549 T8011 T8006 conj sites,promoters
R5550 T8012 T8011 prep of,sites
R5551 T8013 T8012 pobj translation,of
R5552 T8014 T8002 punct (,splicing
R5553 T8015 T8017 compound Ghosh,al.
R5554 T8016 T8017 nmod et,al.
R5555 T8017 T8002 appos al.,splicing
R5556 T8018 T8017 punct ",",al.
R5557 T8019 T8017 appos 2004,al.
R5558 T8020 T8002 punct ;,splicing
R5559 T8021 T8023 compound Ray,al.
R5560 T8022 T8023 nmod et,al.
R5561 T8023 T8002 conj al.,splicing
R5562 T8024 T8023 punct ",",al.
R5563 T8025 T8023 appos 2006,al.
R5564 T8026 T8023 punct ;,al.
R5565 T8027 T8023 appos Figure,al.
R5566 T8028 T8027 nummod 2,Figure
R5567 T8029 T8023 punct ),al.
R5568 T8030 T7997 punct .,identified
R5569 T8031 T8039 prep In,occurs
R5570 T8032 T8031 pobj cancers,In
R5571 T8033 T8035 punct ",",expression
R5572 T8034 T8035 amod aberrant,expression
R5573 T8035 T8039 nsubj expression,occurs
R5574 T8036 T8035 prep of,expression
R5575 T8037 T8038 compound p53,isoforms
R5576 T8038 T8036 pobj isoforms,of
R5577 T8039 T8039 ROOT occurs,occurs
R5578 T8040 T8039 advmod frequently,occurs
R5579 T8041 T8044 punct (,al.
R5580 T8042 T8044 nmod Bourdon,al.
R5581 T8043 T8044 nmod et,al.
R5582 T8044 T8039 parataxis al.,occurs
R5583 T8045 T8044 punct ",",al.
R5584 T8046 T8044 npadvmod 2005,al.
R5585 T8047 T8048 punct ;,Bourdon
R5586 T8048 T8039 nsubj Bourdon,occurs
R5587 T8049 T8048 punct ",",Bourdon
R5588 T8050 T8048 npadvmod 2007,Bourdon
R5589 T8051 T8048 punct ),Bourdon
R5590 T8052 T8039 punct .,occurs
R5591 T8053 T8054 amod Full-length,p53
R5592 T8054 T8061 nsubjpass p53,localized
R5593 T8055 T8054 punct ",",p53
R5594 T8056 T8054 conj Δ133p53,p53
R5595 T8057 T8056 punct ",",Δ133p53
R5596 T8058 T8056 cc and,Δ133p53
R5597 T8059 T8056 conj p53β,Δ133p53
R5598 T8060 T8061 auxpass are,localized
R5599 T8061 T8061 ROOT localized,localized
R5600 T8062 T8063 advmod mainly,in
R5601 T8063 T8061 prep in,localized
R5602 T8064 T8065 det the,nucleus
R5603 T8065 T8063 pobj nucleus,in
R5604 T8066 T8061 punct ",",localized
R5605 T8067 T8061 cc and,localized
R5606 T8068 T8069 advmod only,few
R5607 T8069 T8072 nsubj few,are
R5608 T8070 T8069 prep of,few
R5609 T8071 T8070 pobj them,of
R5610 T8072 T8061 conj are,localized
R5611 T8073 T8072 prep in,are
R5612 T8074 T8073 pobj cytoplasm,in
R5613 T8075 T8072 punct .,are
R5614 T8076 T8080 nsubjpass p53γ,localized
R5615 T8077 T8076 cc and,p53γ
R5616 T8078 T8076 conj Δ133p53β,p53γ
R5617 T8079 T8080 auxpass are,localized
R5618 T8080 T8080 ROOT localized,localized
R5619 T8081 T8080 prep in,localized
R5620 T8082 T8083 det the,nucleus
R5621 T8083 T8081 pobj nucleus,in
R5622 T8084 T8083 cc and,nucleus
R5623 T8085 T8083 conj cytoplasm,nucleus
R5624 T8086 T8080 punct .,localized
R5625 T8087 T8089 nsubjpass Δ133p53γ,localized
R5626 T8088 T8089 auxpass is,localized
R5627 T8089 T8089 ROOT localized,localized
R5628 T8090 T8089 prep in,localized
R5629 T8091 T8092 det the,cytoplasm
R5630 T8092 T8090 pobj cytoplasm,in
R5631 T8093 T8096 punct (,al.
R5632 T8094 T8096 compound Bourdon,al.
R5633 T8095 T8096 nmod et,al.
R5634 T8096 T8089 npadvmod al.,localized
R5635 T8097 T8096 punct ",",al.
R5636 T8098 T8096 npadvmod 2005,al.
R5637 T8099 T8096 punct ),al.
R5638 T8100 T8089 punct .,localized
R5639 T8101 T8106 nmod Co-transfection,increases
R5640 T8102 T8101 prep of,Co-transfection
R5641 T8103 T8102 pobj p53,of
R5642 T8104 T8103 cc and,p53
R5643 T8105 T8106 amod p53β,increases
R5644 T8106 T8106 ROOT increases,increases
R5645 T8107 T8108 compound p53-mediated,apoptosis
R5646 T8108 T8106 dobj apoptosis,increases
R5647 T8109 T8106 punct ",",increases
R5648 T8110 T8122 nmod whereas,al.
R5649 T8111 T8122 dep co-expression,al.
R5650 T8112 T8111 prep of,co-expression
R5651 T8113 T8112 pobj p53,of
R5652 T8114 T8111 prep with,co-expression
R5653 T8115 T8116 amod Δ133p53,suppresses
R5654 T8116 T8114 pobj suppresses,with
R5655 T8117 T8118 nmod p53-mediated,apoptosis
R5656 T8118 T8111 conj apoptosis,co-expression
R5657 T8119 T8122 punct (,al.
R5658 T8120 T8122 compound Bourdon,al.
R5659 T8121 T8122 nmod et,al.
R5660 T8122 T8106 advcl al.,increases
R5661 T8123 T8122 punct ",",al.
R5662 T8124 T8122 npadvmod 2005,al.
R5663 T8125 T8122 punct ),al.
R5664 T8126 T8106 punct .,increases
R5665 T8127 T8129 nsubj Δ133p53,regulates
R5666 T8128 T8129 advmod differentially,regulates
R5667 T8129 T8129 ROOT regulates,regulates
R5668 T8130 T8131 compound gene,expression
R5669 T8131 T8129 dobj expression,regulates
R5670 T8132 T8131 prep in,expression
R5671 T8133 T8132 pobj p53-dependent,in
R5672 T8134 T8129 cc and,regulates
R5673 T8135 T8129 punct -,regulates
R5674 T8136 T8137 amod independent,manners
R5675 T8137 T8129 conj manners,regulates
R5676 T8138 T8137 punct (,manners
R5677 T8139 T8141 compound Aoubala,al.
R5678 T8140 T8141 nmod et,al.
R5679 T8141 T8137 appos al.,manners
R5680 T8142 T8141 punct ",",al.
R5681 T8143 T8141 npadvmod 2011,al.
R5682 T8144 T8137 punct ),manners
R5683 T8145 T8129 punct .,regulates
R5684 T8146 T8155 nsubj Co-expression,affect
R5685 T8147 T8146 prep of,Co-expression
R5686 T8148 T8147 pobj Δ133p53β,of
R5687 T8149 T8148 cc or,Δ133p53β
R5688 T8150 T8148 conj Δ133p53γ,Δ133p53β
R5689 T8151 T8146 prep with,Co-expression
R5690 T8152 T8151 pobj p53,with
R5691 T8153 T8155 aux does,affect
R5692 T8154 T8155 neg not,affect
R5693 T8155 T8155 ROOT affect,affect
R5694 T8156 T8158 nmod p53,activity
R5695 T8157 T8158 compound transcriptional,activity
R5696 T8158 T8155 dobj activity,affect
R5697 T8159 T8158 prep on,activity
R5698 T8160 T8159 pobj p21,on
R5699 T8161 T8155 cc and,affect
R5700 T8162 T8163 compound Bax,promoters
R5701 T8163 T8163 ROOT promoters,promoters
R5702 T8164 T8163 punct ",",promoters
R5703 T8165 T8167 advmod as,as
R5704 T8166 T8167 advmod well,as
R5705 T8167 T8163 cc as,promoters
R5706 T8168 T8163 conj apoptosis,promoters
R5707 T8169 T8155 punct .,affect

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue Negation
T8259 623-656 Gene_expression denotes co-expression of p53 with Δ133p53
T8258 424-484 Localization denotes p53γ and Δ133p53β are localized in the nucleus and cytoplasm
T8257 424-484 Localization denotes p53γ and Δ133p53β are localized in the nucleus and cytoplasm
T8256 748-780 Regulation denotes gene expression in p53-dependent
T8255 486-547 Localization denotes Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005)
T8254 58-109 Binding denotes alternative mRNA splicing, multiple gene promoters,
T8253 830-876 Gene_expression denotes Co-expression of Δ133p53β or Δ133p53γ with p53
T8252 830-876 Gene_expression denotes Co-expression of Δ133p53β or Δ133p53γ with p53
T8251 830-912 Regulation denotes Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional true
T8250 830-912 Regulation denotes Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional true
T8249 715-797 Regulation denotes Δ133p53 differentially regulates gene expression in p53-dependent and -independent
T8248 623-667 Negative_regulation denotes co-expression of p53 with Δ133p53 suppresses
T8247 637-643 Protein denotes of p53
T8246 576-580 Protein denotes p53β
T8245 767-780 Protein denotes p53-dependent
T8244 179-182 Protein denotes Ray
T8243 240-255 Protein denotes of p53 isoforms
T8242 591-603 Protein denotes p53-mediated
T8241 85-108 Entity denotes multiple gene promoters
T8240 508-547 Entity denotes in the cytoplasm (Bourdon et al., 2005)
T8239 343-347 Protein denotes p53β
T8238 433-441 Protein denotes Δ133p53β
T8237 313-328 Protein denotes Full-length p53
T8236 26-29 Protein denotes p53
T8235 372-384 Entity denotes the nucleus,
T8234 459-470 Entity denotes the nucleus
T8233 424-428 Protein denotes p53γ
T8232 933-946 Entity denotes Bax promoters
T8231 873-876 Protein denotes p53
T8230 413-422 Entity denotes cytoplasm
T8229 568-571 Protein denotes p53
T8228 715-722 Protein denotes Δ133p53
T8227 925-928 Protein denotes p21
T8226 847-855 Protein denotes Δ133p53β
T8225 668-671 Protein denotes p53
T8224 893-896 Protein denotes p53
T8223 330-337 Protein denotes Δ133p53
T8222 486-547 Protein denotes Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005)
T8221 313-328 Protein denotes Full-length p53
T8220 649-656 Protein denotes Δ133p53
T8219 933-936 Protein denotes Bax
T8218 85-108 Protein denotes multiple gene promoters
T8217 859-867 Protein denotes Δ133p53γ
T8216 70-74 Protein denotes mRNA
T8215 475-484 Entity denotes cytoplasm
R5740 T8215 T8257 locationOf cytoplasm,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5741 T8215 T8258 locationOf cytoplasm,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5742 T8216 T8254 themeOf mRNA,"alternative mRNA splicing, multiple gene promoters,"
R5743 T8217 T8252 themeOf Δ133p53γ,Co-expression of Δ133p53β or Δ133p53γ with p53
R5744 T8222 T8255 themeOf "Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005)","Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005)"
R5745 T8224 T8250 themeOf p53,Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional
R5746 T8224 T8251 themeOf p53,Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional
R5747 T8226 T8253 themeOf Δ133p53β,Co-expression of Δ133p53β or Δ133p53γ with p53
R5748 T8228 T8249 causeOf Δ133p53,Δ133p53 differentially regulates gene expression in p53-dependent and -independent
R5749 T8232 T8219 partOf Bax promoters,Bax
R5750 T8233 T8258 themeOf p53γ,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5751 T8234 T8257 locationOf the nucleus,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5752 T8234 T8258 locationOf the nucleus,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5753 T8238 T8257 themeOf Δ133p53β,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5754 T8240 T8255 locationOf "in the cytoplasm (Bourdon et al., 2005)","Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005)"
R5755 T8245 T8256 causeOf p53-dependent,gene expression in p53-dependent
R5756 T8247 T8259 themeOf of p53,co-expression of p53 with Δ133p53
R5757 T8252 T8250 causeOf Co-expression of Δ133p53β or Δ133p53γ with p53,Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional
R5758 T8253 T8251 causeOf Co-expression of Δ133p53β or Δ133p53γ with p53,Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional
R5759 T8259 T8248 themeOf co-expression of p53 with Δ133p53,co-expression of p53 with Δ133p53 suppresses

DLUT931

Id Subject Object Predicate Lexical cue
T7885 886-892 Regulation denotes affect
T7884 830-843 Gene_expression denotes Co-expression
T7883 623-636 Gene_expression denotes co-expression
T7882 581-590 Positive_regulation denotes increases
T7881 549-564 Gene_expression denotes Co-transfection
T7880 498-507 Localization denotes localized
T7879 446-455 Localization denotes localized
T7878 352-361 Localization denotes localized
T7877 229-239 Gene_expression denotes expression
T7876 933-936 Protein denotes Bax
T7875 925-928 Protein denotes p21
T7874 893-896 Protein denotes p53
T7873 873-876 Protein denotes p53
T7872 859-867 Protein denotes Δ133p53γ
T7871 847-855 Protein denotes Δ133p53β
T7870 767-770 Protein denotes p53
T7869 715-722 Protein denotes Δ133p53
T7868 568-571 Protein denotes p53
T7867 668-671 Protein denotes p53
T7866 649-656 Protein denotes Δ133p53
T7865 640-643 Protein denotes p53
T7864 591-594 Protein denotes p53
T7863 576-580 Protein denotes p53β
T7862 486-494 Protein denotes Δ133p53γ
T7861 433-441 Protein denotes Δ133p53β
T7860 424-428 Protein denotes p53γ
T7859 343-347 Protein denotes p53β
T7858 330-337 Protein denotes Δ133p53
T7857 325-328 Protein denotes p53
T7856 243-246 Protein denotes p53
T7855 26-29 Protein denotes p53
R5448 T7856 T7877 themeOf p53,expression
R5449 T7857 T7878 themeOf p53,localized
R5450 T7858 T7878 themeOf Δ133p53,localized
R5451 T7859 T7878 themeOf p53β,localized
R5452 T7860 T7879 themeOf p53γ,localized
R5453 T7861 T7879 themeOf Δ133p53β,localized
R5454 T7862 T7880 themeOf Δ133p53γ,localized
R5455 T7863 T7881 themeOf p53β,Co-transfection
R5456 T7865 T7883 themeOf p53,co-expression
R5457 T7866 T7883 themeOf Δ133p53,co-expression
R5458 T7868 T7881 themeOf p53,Co-transfection
R5459 T7871 T7884 themeOf Δ133p53β,Co-expression
R5460 T7872 T7884 themeOf Δ133p53γ,Co-expression
R5461 T7873 T7884 themeOf p53,Co-expression
R5462 T7876 T7885 themeOf Bax,affect
R5463 T7876 T7885 themeOf Bax,affect
R5464 T7876 T7885 themeOf Bax,affect
R5465 T7881 T7882 themeOf Co-transfection,increases
R5466 T7881 T7882 themeOf Co-transfection,increases
R5467 T7884 T7885 causeOf Co-expression,affect
R5468 T7884 T7885 causeOf Co-expression,affect
R5469 T7884 T7885 causeOf Co-expression,affect

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T7943 830-843 Gene_expression denotes Co-expression
T7942 738-747 Regulation denotes regulates
T7941 753-763 Gene_expression denotes expression
T7940 623-636 Gene_expression denotes co-expression
T7939 549-564 Gene_expression denotes Co-transfection
T7938 498-507 Localization denotes localized
T7937 446-455 Localization denotes localized
T7936 352-361 Localization denotes localized
T7935 229-239 Gene_expression denotes expression
T7934 933-936 Protein denotes Bax
T7933 925-928 Protein denotes p21
T7932 893-896 Protein denotes p53
T7931 873-876 Protein denotes p53
T7930 859-867 Protein denotes Δ133p53γ
T7929 847-855 Protein denotes Δ133p53β
T7928 767-770 Protein denotes p53
T7927 715-722 Protein denotes Δ133p53
T7926 568-571 Protein denotes p53
T7925 668-671 Protein denotes p53
T7924 649-656 Protein denotes Δ133p53
T7923 640-643 Protein denotes p53
T7922 591-594 Protein denotes p53
T7921 576-580 Protein denotes p53β
T7920 486-494 Protein denotes Δ133p53γ
T7919 433-441 Protein denotes Δ133p53β
T7918 424-428 Protein denotes p53γ
T7917 343-347 Protein denotes p53β
T7916 330-337 Protein denotes Δ133p53
T7915 325-328 Protein denotes p53
T7914 243-246 Protein denotes p53
T7913 26-29 Protein denotes p53
R5478 T7914 T7935 themeOf p53,expression
R5479 T7915 T7936 themeOf p53,localized
R5480 T7916 T7936 themeOf Δ133p53,localized
R5481 T7917 T7936 themeOf p53β,localized
R5482 T7918 T7937 themeOf p53γ,localized
R5483 T7919 T7937 themeOf Δ133p53β,localized
R5484 T7920 T7938 themeOf Δ133p53γ,localized
R5485 T7921 T7939 themeOf p53β,Co-transfection
R5486 T7923 T7940 themeOf p53,co-expression
R5487 T7924 T7940 themeOf Δ133p53,co-expression
R5488 T7926 T7939 themeOf p53,Co-transfection
R5489 T7927 T7942 causeOf Δ133p53,regulates
R5490 T7927 T7941 themeOf Δ133p53,expression
R5491 T7929 T7943 themeOf Δ133p53β,Co-expression
R5492 T7930 T7943 themeOf Δ133p53γ,Co-expression
R5493 T7931 T7943 themeOf p53,Co-expression
R5494 T7941 T7942 themeOf expression,regulates

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7822 886-892 Regulation denotes affect
T7821 830-843 Gene_expression denotes Co-expression
T7820 738-747 Regulation denotes regulates
T7819 549-564 Gene_expression denotes Co-transfection
T7818 623-636 Gene_expression denotes co-expression
T7817 498-507 Localization denotes localized
T7816 446-455 Localization denotes localized
T7815 352-361 Localization denotes localized
T7814 229-239 Gene_expression denotes expression
T7813 933-936 Protein denotes Bax
T7812 925-928 Protein denotes p21
T7811 893-896 Protein denotes p53
T7810 873-876 Protein denotes p53
T7809 859-867 Protein denotes Δ133p53γ
T7808 847-855 Protein denotes Δ133p53β
T7807 767-770 Protein denotes p53
T7806 715-722 Protein denotes Δ133p53
T7805 568-571 Protein denotes p53
T7804 668-671 Protein denotes p53
T7803 649-656 Protein denotes Δ133p53
T7802 640-643 Protein denotes p53
T7801 591-594 Protein denotes p53
T7800 576-580 Protein denotes p53β
T7799 486-494 Protein denotes Δ133p53γ
T7798 433-441 Protein denotes Δ133p53β
T7797 424-428 Protein denotes p53γ
T7796 343-347 Protein denotes p53β
T7795 330-337 Protein denotes Δ133p53
T7794 325-328 Protein denotes p53
T7793 243-246 Protein denotes p53
T7792 26-29 Protein denotes p53
R5426 T7793 T7814 themeOf p53,expression
R5427 T7794 T7815 themeOf p53,localized
R5428 T7795 T7815 themeOf Δ133p53,localized
R5429 T7796 T7815 themeOf p53β,localized
R5430 T7797 T7816 themeOf p53γ,localized
R5431 T7798 T7816 themeOf Δ133p53β,localized
R5432 T7799 T7817 themeOf Δ133p53γ,localized
R5433 T7800 T7819 themeOf p53β,Co-transfection
R5434 T7802 T7818 themeOf p53,co-expression
R5435 T7803 T7818 themeOf Δ133p53,co-expression
R5436 T7805 T7819 themeOf p53,Co-transfection
R5437 T7806 T7820 themeOf Δ133p53,regulates
R5438 T7808 T7821 themeOf Δ133p53β,Co-expression
R5439 T7809 T7821 themeOf Δ133p53γ,Co-expression
R5440 T7810 T7821 themeOf p53,Co-expression
R5441 T7811 T7822 themeOf p53,affect

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7832 893-896 http://www.uniprot.org/uniprot/P04637 denotes p53
T7831 873-876 http://www.uniprot.org/uniprot/P04637 denotes p53
T7830 767-770 http://www.uniprot.org/uniprot/P04637 denotes p53
T7829 668-671 http://www.uniprot.org/uniprot/P04637 denotes p53
T7828 640-643 http://www.uniprot.org/uniprot/P04637 denotes p53
T7827 591-594 http://www.uniprot.org/uniprot/P04637 denotes p53
T7826 568-571 http://www.uniprot.org/uniprot/P04637 denotes p53
T7825 325-328 http://www.uniprot.org/uniprot/P04637 denotes p53
T7824 243-246 http://www.uniprot.org/uniprot/P04637 denotes p53
T7823 26-29 http://www.uniprot.org/uniprot/P04637 denotes p53

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T7561 576-580 Protein denotes p53β
T7560 568-571 Protein denotes p53
T7559 486-494 Protein denotes Δ133p53γ
T7558 433-441 Protein denotes Δ133p53β
T7557 424-428 Protein denotes p53γ
T7556 343-347 Protein denotes p53β
T7555 330-337 Protein denotes Δ133p53
T7554 325-328 Protein denotes p53
T7553 243-246 Protein denotes p53
T7552 26-29 Protein denotes p53
T7573 933-936 Protein denotes Bax
T7572 925-928 Protein denotes p21
T7571 893-896 Protein denotes p53
T7570 873-876 Protein denotes p53
T7569 859-867 Protein denotes Δ133p53γ
T7568 847-855 Protein denotes Δ133p53β
T7567 767-770 Protein denotes p53
T7566 715-722 Protein denotes Δ133p53
T7565 668-671 Protein denotes p53
T7564 649-656 Protein denotes Δ133p53
T7563 640-643 Protein denotes p53
T7562 591-594 Protein denotes p53

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T7551 343-347 Antecedent denotes p53β
T7550 330-337 Antecedent denotes Δ133p53
T7549 325-328 Antecedent denotes p53
T7548 401-405 Anaphor denotes them
R5247 T7548 T7549 boundBy them,p53
R5248 T7548 T7550 boundBy them,Δ133p53
R5249 T7548 T7551 boundBy them,p53β

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7791 959-968 NN denotes apoptosis
T7790 956-958 IN denotes as
T7789 951-955 RB denotes well
T7788 948-950 RB denotes as
T7787 946-947 -COMMA- denotes ,
T7786 937-946 NN denotes promoters
T7785 933-936 NN denotes Bax
T7784 929-932 CC denotes and
T7743 668-680 JJ denotes p53-mediated
T7742 657-667 VB denotes suppresses
T7741 649-656 NN denotes Δ133p53
T7740 644-648 IN denotes with
T7739 640-643 NN denotes p53
T7738 637-639 IN denotes of
T7737 623-636 NN denotes co-expression
T7736 615-622 IN denotes whereas
T7735 613-614 -COMMA- denotes ,
T7734 604-613 NN denotes apoptosis
T7733 591-603 JJ denotes p53-mediated
T7732 581-590 VB denotes increases
T7731 576-580 NN denotes p53β
T7730 572-575 CC denotes and
T7729 568-571 NN denotes p53
T7728 565-567 IN denotes of
T7727 549-564 NN denotes Co-transfection
T7726 546-547 -RRB- denotes )
T7725 542-546 CD denotes 2005
T7724 540-541 -COMMA- denotes ,
T7723 537-540 FW denotes al.
T7722 534-536 FW denotes et
T7721 526-533 NNP denotes Bourdon
T7720 525-526 -LRB- denotes (
T7719 515-524 NN denotes cytoplasm
T7718 511-514 DT denotes the
T7717 508-510 IN denotes in
T7716 498-507 JJ denotes localized
T7715 495-497 VB denotes is
T7714 486-494 NN denotes Δ133p53γ
T7713 475-485 NN denotes cytoplasm.
T7712 471-474 CC denotes and
T7711 463-470 NN denotes nucleus
T7710 459-462 DT denotes the
T7709 456-458 IN denotes in
T7708 446-455 VB denotes localized
T7707 442-445 VB denotes are
T7706 433-441 NN denotes Δ133p53β
T7705 429-432 CC denotes and
T7704 424-428 NN denotes p53γ
T7703 413-423 NN denotes cytoplasm.
T7702 410-412 IN denotes in
T7701 406-409 VB denotes are
T7700 401-405 PRP denotes them
T7699 398-400 IN denotes of
T7698 394-397 JJ denotes few
T7697 389-393 RB denotes only
T7696 385-388 CC denotes and
T7695 383-384 -COMMA- denotes ,
T7694 376-383 NN denotes nucleus
T7693 372-375 DT denotes the
T7692 369-371 IN denotes in
T7691 362-368 RB denotes mainly
T7690 352-361 VB denotes localized
T7689 348-351 VB denotes are
T7688 343-347 NN denotes p53β
T7687 339-342 CC denotes and
T7686 337-338 -COMMA- denotes ,
T7685 330-337 NN denotes Δ133p53
T7684 328-329 -COMMA- denotes ,
T7683 325-328 NN denotes p53
T7682 313-324 JJ denotes Full-length
T7681 310-311 -RRB- denotes )
T7680 306-310 CD denotes 2007
T7679 304-305 -COMMA- denotes ,
T7678 297-304 NNP denotes Bourdon
T7677 295-296 -COLON- denotes ;
T7676 291-295 CD denotes 2005
T7675 289-290 -COMMA- denotes ,
T7674 286-289 FW denotes al.
T7673 283-285 FW denotes et
T7672 275-282 NNP denotes Bourdon
T7671 274-275 -LRB- denotes (
T7670 263-273 RB denotes frequently
T7669 256-262 VB denotes occurs
T7668 247-255 NN denotes isoforms
T7667 243-246 NN denotes p53
T7666 240-242 IN denotes of
T7665 229-239 NN denotes expression
T7664 220-228 JJ denotes aberrant
T7663 218-219 -COMMA- denotes ,
T7662 211-218 NN denotes cancers
T7661 208-210 IN denotes In
T7660 205-206 -RRB- denotes )
T7659 204-205 CD denotes 2
T7658 197-203 NN denotes Figure
T7657 195-196 -COLON- denotes ;
T7656 191-195 CD denotes 2006
T7655 189-190 -COMMA- denotes ,
T7654 186-189 FW denotes al.
T7653 183-185 FW denotes et
T7652 179-182 NNP denotes Ray
T7651 177-178 -COLON- denotes ;
T7650 173-177 CD denotes 2004
T7649 171-172 -COMMA- denotes ,
T7648 168-171 FW denotes al.
T7647 165-167 FW denotes et
T7646 159-164 NNP denotes Ghosh
T7645 158-159 -LRB- denotes (
T7644 146-157 NN denotes translation
T7643 143-145 IN denotes of
T7642 137-142 NN denotes sites
T7641 126-136 NN denotes initiation
T7640 114-125 JJ denotes alternative
T7639 110-113 CC denotes and
T7638 108-109 -COMMA- denotes ,
T7637 99-108 NN denotes promoters
T7636 94-98 NN denotes gene
T7635 85-93 JJ denotes multiple
T7634 83-84 -COMMA- denotes ,
T7633 75-83 NN denotes splicing
T7632 70-74 NN denotes mRNA
T7631 58-69 JJ denotes alternative
T7630 55-57 TO denotes to
T7629 51-54 JJ denotes due
T7628 40-50 VB denotes identified
T7627 35-39 VB denotes been
T7626 30-34 VB denotes have
T7625 26-29 NN denotes p53
T7624 23-25 IN denotes of
T7623 14-22 NN denotes isoforms
T7622 9-13 CD denotes nine
T7621 3-8 JJ denotes least
T7620 0-2 IN denotes At
T7783 925-928 NN denotes p21
T7782 922-924 IN denotes on
T7781 913-921 NN denotes activity
T7780 897-912 JJ denotes transcriptional
T7779 893-896 NN denotes p53
T7778 886-892 VB denotes affect
T7777 882-885 RB denotes not
T7776 877-881 VB denotes does
T7775 873-876 NN denotes p53
T7774 868-872 IN denotes with
T7773 859-867 NN denotes Δ133p53γ
T7772 856-858 CC denotes or
T7771 847-855 NN denotes Δ133p53β
T7770 844-846 IN denotes of
T7769 830-843 NN denotes Co-expression
T7768 815-816 -RRB- denotes e
T7767 810-814 CD denotes bala
T7766 809-810 -COMMA- denotes u
T7765 806-809 FW denotes (Ao
T7764 803-805 FW denotes rs
T7763 796-803 NNP denotes t manne
T7762 795-796 -LRB- denotes n
T7761 788-795 NN denotes depende
T7760 776-788 JJ denotes dent and -in
T7759 773-776 CC denotes pen
T7758 760-773 JJ denotes ion in p53-de
T7757 758-760 IN denotes ss
T7756 748-758 NN denotes gene expre
T7755 743-747 NN denotes ates
T7754 734-743 VB denotes lly regul
T7753 720-734 RB denotes 53 differentia
T7752 713-720 -DQE- denotes . Δ133p
T7751 712-713 -RRB- denotes )
T7750 708-712 CD denotes 2005
T7749 706-707 -COMMA- denotes ,
T7748 703-706 FW denotes al.
T7747 700-702 FW denotes et
T7746 692-699 NNP denotes Bourdon
T7745 691-692 -LRB- denotes (
T7744 681-690 NN denotes apoptosis
R5391 T7760 T7759 arg2Of dent and -in,pen
R5392 T7761 T7757 arg2Of depende,ss
R5393 T7761 T7758 arg1Of depende,ion in p53-de
R5394 T7761 T7760 arg1Of depende,dent and -in
R5395 T7761 T7762 arg1Of depende,n
R5250 T7622 T7620 arg1Of nine,At
R5251 T7622 T7621 arg1Of nine,least
R5252 T7623 T7622 arg1Of isoforms,nine
R5253 T7623 T7624 arg1Of isoforms,of
R5254 T7623 T7626 arg1Of isoforms,have
R5255 T7623 T7627 arg1Of isoforms,been
R5256 T7623 T7628 arg2Of isoforms,identified
R5257 T7625 T7624 arg2Of p53,of
R5258 T7628 T7626 arg2Of identified,have
R5259 T7628 T7627 arg2Of identified,been
R5260 T7628 T7630 arg1Of identified,to
R5261 T7628 T7645 arg1Of identified,(
R5262 T7630 T7629 arg1Of to,due
R5263 T7633 T7631 arg1Of splicing,alternative
R5264 T7633 T7632 arg1Of splicing,mRNA
R5265 T7633 T7634 arg1Of splicing,","
R5266 T7634 T7639 arg1Of ",",and
R5267 T7637 T7634 arg2Of promoters,","
R5268 T7637 T7635 arg1Of promoters,multiple
R5269 T7637 T7636 arg1Of promoters,gene
R5270 T7639 T7630 arg2Of and,to
R5271 T7639 T7638 arg1Of and,","
R5272 T7642 T7639 arg2Of sites,and
R5273 T7642 T7640 arg1Of sites,alternative
R5274 T7642 T7641 arg1Of sites,initiation
R5275 T7642 T7643 arg1Of sites,of
R5276 T7644 T7643 arg2Of translation,of
R5277 T7646 T7645 arg2Of Ghosh,(
R5278 T7646 T7647 arg1Of Ghosh,et
R5279 T7646 T7648 arg1Of Ghosh,al.
R5280 T7646 T7649 arg1Of Ghosh,","
R5281 T7646 T7651 arg1Of Ghosh,;
R5282 T7646 T7657 arg1Of Ghosh,;
R5283 T7650 T7649 arg2Of 2004,","
R5284 T7652 T7653 arg1Of Ray,et
R5285 T7652 T7654 arg1Of Ray,al.
R5286 T7652 T7655 arg1Of Ray,","
R5287 T7655 T7651 arg2Of ",",;
R5288 T7656 T7655 arg2Of 2006,","
R5289 T7658 T7657 arg2Of Figure,;
R5290 T7658 T7659 arg1Of Figure,2
R5291 T7660 T7645 arg3Of ),(
R5292 T7662 T7661 arg2Of cancers,In
R5293 T7665 T7664 arg1Of expression,aberrant
R5294 T7665 T7666 arg1Of expression,of
R5295 T7665 T7669 arg1Of expression,occurs
R5296 T7668 T7666 arg2Of isoforms,of
R5297 T7668 T7667 arg1Of isoforms,p53
R5298 T7669 T7661 arg1Of occurs,In
R5299 T7669 T7663 arg1Of occurs,","
R5300 T7669 T7670 arg1Of occurs,frequently
R5301 T7669 T7671 arg1Of occurs,(
R5302 T7672 T7671 arg2Of Bourdon,(
R5303 T7672 T7673 arg1Of Bourdon,et
R5304 T7672 T7674 arg1Of Bourdon,al.
R5305 T7672 T7675 arg1Of Bourdon,","
R5306 T7672 T7677 arg1Of Bourdon,;
R5307 T7676 T7675 arg2Of 2005,","
R5308 T7678 T7677 arg2Of Bourdon,;
R5309 T7678 T7679 arg1Of Bourdon,","
R5310 T7680 T7679 arg2Of 2007,","
R5311 T7681 T7671 arg3Of ),(
R5312 T7683 T7682 arg1Of p53,Full-length
R5313 T7683 T7684 arg1Of p53,","
R5314 T7684 T7687 arg1Of ",",and
R5315 T7685 T7684 arg2Of Δ133p53,","
R5316 T7687 T7686 arg1Of and,","
R5317 T7687 T7689 arg1Of and,are
R5318 T7687 T7690 arg2Of and,localized
R5319 T7688 T7687 arg2Of p53β,and
R5320 T7690 T7689 arg2Of localized,are
R5321 T7690 T7692 arg1Of localized,in
R5322 T7690 T7696 arg1Of localized,and
R5323 T7692 T7691 arg1Of in,mainly
R5324 T7694 T7692 arg2Of nucleus,in
R5325 T7694 T7693 arg1Of nucleus,the
R5326 T7696 T7695 arg1Of and,","
R5327 T7696 T7720 arg1Of and,(
R5328 T7698 T7697 arg1Of few,only
R5329 T7698 T7699 arg1Of few,of
R5330 T7698 T7701 arg1Of few,are
R5331 T7698 T7702 arg1Of few,in
R5332 T7700 T7699 arg2Of them,of
R5333 T7701 T7705 arg1Of are,and
R5334 T7702 T7701 arg2Of in,are
R5335 T7704 T7702 arg2Of p53γ,in
R5336 T7704 T7703 arg1Of p53γ,cytoplasm.
R5337 T7705 T7696 arg2Of and,and
R5338 T7706 T7707 arg1Of Δ133p53β,are
R5339 T7706 T7708 arg2Of Δ133p53β,localized
R5340 T7708 T7707 arg2Of localized,are
R5341 T7708 T7709 arg1Of localized,in
R5342 T7708 T7712 arg1Of localized,and
R5343 T7711 T7709 arg2Of nucleus,in
R5344 T7711 T7710 arg1Of nucleus,the
R5345 T7712 T7705 arg2Of and,and
R5346 T7714 T7713 arg1Of Δ133p53γ,cytoplasm.
R5347 T7714 T7715 arg1Of Δ133p53γ,is
R5348 T7714 T7716 arg1Of Δ133p53γ,localized
R5349 T7715 T7712 arg2Of is,and
R5350 T7716 T7715 arg2Of localized,is
R5351 T7716 T7717 arg1Of localized,in
R5352 T7719 T7717 arg2Of cytoplasm,in
R5353 T7719 T7718 arg1Of cytoplasm,the
R5354 T7721 T7720 arg2Of Bourdon,(
R5355 T7721 T7722 arg1Of Bourdon,et
R5356 T7721 T7723 arg1Of Bourdon,al.
R5357 T7721 T7724 arg1Of Bourdon,","
R5358 T7725 T7724 arg2Of 2005,","
R5359 T7726 T7720 arg3Of ),(
R5360 T7727 T7728 arg1Of Co-transfection,of
R5361 T7727 T7732 arg1Of Co-transfection,increases
R5362 T7729 T7730 arg1Of p53,and
R5363 T7730 T7728 arg2Of and,of
R5364 T7731 T7730 arg2Of p53β,and
R5365 T7732 T7736 arg1Of increases,whereas
R5366 T7734 T7732 arg2Of apoptosis,increases
R5367 T7734 T7733 arg1Of apoptosis,p53-mediated
R5368 T7736 T7735 arg1Of whereas,","
R5369 T7737 T7738 arg1Of co-expression,of
R5370 T7737 T7740 arg1Of co-expression,with
R5371 T7737 T7742 arg1Of co-expression,suppresses
R5372 T7739 T7738 arg2Of p53,of
R5373 T7741 T7740 arg2Of Δ133p53,with
R5374 T7742 T7736 arg2Of suppresses,whereas
R5375 T7742 T7745 arg1Of suppresses,(
R5376 T7744 T7742 arg2Of apoptosis,suppresses
R5377 T7744 T7743 arg1Of apoptosis,p53-mediated
R5378 T7746 T7745 arg2Of Bourdon,(
R5379 T7746 T7747 arg1Of Bourdon,et
R5380 T7746 T7748 arg1Of Bourdon,al.
R5381 T7746 T7749 arg1Of Bourdon,","
R5382 T7750 T7749 arg2Of 2005,","
R5383 T7751 T7745 arg3Of ),(
R5384 T7752 T7754 arg1Of . Δ133p,lly regul
R5385 T7754 T7742 arg3Of lly regul,suppresses
R5386 T7754 T7753 arg1Of lly regul,53 differentia
R5387 T7756 T7754 arg2Of gene expre,lly regul
R5388 T7756 T7755 arg1Of gene expre,ates
R5389 T7756 T7757 arg1Of gene expre,ss
R5390 T7758 T7759 arg1Of ion in p53-de,pen
R5396 T7763 T7762 arg2Of t manne,n
R5397 T7763 T7764 arg1Of t manne,rs
R5398 T7763 T7765 arg1Of t manne,(Ao
R5399 T7763 T7766 arg1Of t manne,u
R5400 T7767 T7766 arg2Of bala,u
R5401 T7768 T7762 arg3Of e,n
R5402 T7769 T7770 arg1Of Co-expression,of
R5403 T7769 T7774 arg1Of Co-expression,with
R5404 T7769 T7776 arg1Of Co-expression,does
R5405 T7769 T7778 arg1Of Co-expression,affect
R5406 T7771 T7772 arg1Of Δ133p53β,or
R5407 T7772 T7770 arg2Of or,of
R5408 T7773 T7772 arg2Of Δ133p53γ,or
R5409 T7775 T7774 arg2Of p53,with
R5410 T7778 T7776 arg2Of affect,does
R5411 T7778 T7777 arg1Of affect,not
R5412 T7781 T7779 arg1Of activity,p53
R5413 T7781 T7780 arg1Of activity,transcriptional
R5414 T7781 T7782 arg1Of activity,on
R5415 T7781 T7790 arg1Of activity,as
R5416 T7783 T7784 arg1Of p21,and
R5417 T7785 T7784 arg2Of Bax,and
R5418 T7786 T7782 arg2Of promoters,on
R5419 T7786 T7783 arg1Of promoters,p21
R5420 T7786 T7785 arg1Of promoters,Bax
R5421 T7790 T7778 arg2Of as,affect
R5422 T7790 T7787 arg1Of as,","
R5423 T7790 T7788 arg1Of as,as
R5424 T7790 T7789 arg1Of as,well
R5425 T7791 T7790 arg2Of apoptosis,as

2_test

Id Subject Object Predicate Lexical cue
23459853-15340061-38778576 173-177 15340061 denotes 2004
23459853-16440000-38778577 191-195 16440000 denotes 2006
23459853-16131611-38778578 291-295 16131611 denotes 2005
23459853-17637683-38778579 306-310 17637683 denotes 2007
23459853-16131611-38778580 542-546 16131611 denotes 2005
23459853-16131611-38778581 708-712 16131611 denotes 2005
23459853-20689555-38778582 823-827 20689555 denotes 2011

GO-BP

Id Subject Object Predicate Lexical cue
T7592 897-912 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T7591 748-763 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T7590 959-968 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T7589 681-690 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T7588 604-613 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T7587 959-968 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T7586 681-690 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T7585 604-613 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T7584 446-470 http://purl.obolibrary.org/obo/GO_0051647 denotes localized in the nucleus
T7583 498-507 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T7582 446-455 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T7581 352-361 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T7580 146-157 http://purl.obolibrary.org/obo/GO_0006412 denotes translation
T7579 75-83 http://purl.obolibrary.org/obo/GO_0045292 denotes splicing
T7578 70-83 http://purl.obolibrary.org/obo/GO_0000398 denotes mRNA splicing
T7577 70-83 http://purl.obolibrary.org/obo/GO_0000394 denotes mRNA splicing
T7576 70-83 http://purl.obolibrary.org/obo/GO_0000374 denotes mRNA splicing
T7575 70-83 http://purl.obolibrary.org/obo/GO_0000373 denotes mRNA splicing
T7574 70-83 http://purl.obolibrary.org/obo/GO_0000372 denotes mRNA splicing

GO-CC

Id Subject Object Predicate Lexical cue
T7597 515-524 http://purl.obolibrary.org/obo/GO_0005737 denotes cytoplasm
T7596 475-484 http://purl.obolibrary.org/obo/GO_0005737 denotes cytoplasm
T7595 413-422 http://purl.obolibrary.org/obo/GO_0005737 denotes cytoplasm
T7594 463-470 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus
T7593 376-383 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

sentences

Id Subject Object Predicate Lexical cue
T7495 830-969 Sentence denotes Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional activity on p21 and Bax promoters, as well as apoptosis.
T7494 549-829 Sentence denotes Co-transfection of p53 and p53β increases p53-mediated apoptosis, whereas co-expression of p53 with Δ133p53 suppresses p53-mediated apoptosis (Bourdon et al., 2005). Δ133p53 differentially regulates gene expression in p53-dependent and -independent manners (Aoubala et al., 2011).
T7493 313-548 Sentence denotes Full-length p53, Δ133p53, and p53β are localized mainly in the nucleus, and only few of them are in cytoplasm. p53γ and Δ133p53β are localized in the nucleus and cytoplasm. Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005).
T7492 208-312 Sentence denotes In cancers, aberrant expression of p53 isoforms occurs frequently (Bourdon et al., 2005; Bourdon, 2007).
T7491 0-207 Sentence denotes At least nine isoforms of p53 have been identified due to alternative mRNA splicing, multiple gene promoters, and alternative initiation sites of translation (Ghosh et al., 2004; Ray et al., 2006; Figure 2).
T104 0-207 Sentence denotes At least nine isoforms of p53 have been identified due to alternative mRNA splicing, multiple gene promoters, and alternative initiation sites of translation (Ghosh et al., 2004; Ray et al., 2006; Figure 2).
T105 208-312 Sentence denotes In cancers, aberrant expression of p53 isoforms occurs frequently (Bourdon et al., 2005; Bourdon, 2007).
T106 313-548 Sentence denotes Full-length p53, Δ133p53, and p53β are localized mainly in the nucleus, and only few of them are in cytoplasm. p53γ and Δ133p53β are localized in the nucleus and cytoplasm. Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005).
T107 549-829 Sentence denotes Co-transfection of p53 and p53β increases p53-mediated apoptosis, whereas co-expression of p53 with Δ133p53 suppresses p53-mediated apoptosis (Bourdon et al., 2005). Δ133p53 differentially regulates gene expression in p53-dependent and -independent manners (Aoubala et al., 2011).
T108 830-969 Sentence denotes Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional activity on p21 and Bax promoters, as well as apoptosis.

simple1

Id Subject Object Predicate Lexical cue
T7619 933-936 Protein denotes Bax
T7618 925-928 Protein denotes p21
T7617 893-896 Protein denotes p53
T7616 873-876 Protein denotes p53
T7615 859-867 Protein denotes Δ133p53γ
T7614 847-855 Protein denotes Δ133p53β
T7613 767-770 Protein denotes p53
T7612 715-722 Protein denotes Δ133p53
T7611 668-671 Protein denotes p53
T7610 649-656 Protein denotes Δ133p53
T7609 640-643 Protein denotes p53
T7608 591-594 Protein denotes p53
T7607 576-580 Protein denotes p53β
T7606 568-571 Protein denotes p53
T7605 486-494 Protein denotes Δ133p53γ
T7604 433-441 Protein denotes Δ133p53β
T7603 424-428 Protein denotes p53γ
T7602 343-347 Protein denotes p53β
T7601 330-337 Protein denotes Δ133p53
T7600 325-328 Protein denotes p53
T7599 243-246 Protein denotes p53
T7598 26-29 Protein denotes p53