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PMC:3586680 / 14835-15817 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T7490 946-949 Protein denotes Bax
T7489 938-941 Protein denotes p21
T7488 910-925 Transcription denotes transcriptional
T7487 906-909 Protein denotes p53
T7486 899-905 Regulation denotes affect
T7485 886-889 Protein denotes p53
T7484 872-880 Protein denotes Δ133p53γ
T7483 860-868 Protein denotes Δ133p53β
T7482 846-856 Gene_expression denotes expression
T7481 843-846 Gene_expression denotes Co-
T7480 780-783 Protein denotes p53
T7479 728-735 Protein denotes Δ133p53
T7478 681-684 Protein denotes p53
T7477 662-669 Protein denotes Δ133p53
T7476 653-656 Protein denotes p53
T7475 639-649 Gene_expression denotes expression
T7474 636-639 Gene_expression denotes co-
T7473 604-607 Protein denotes p53
T7472 589-593 Protein denotes p53β
T7471 581-584 Protein denotes p53
T7470 499-507 Protein denotes Δ133p53γ
T7469 476-483 Entity denotes nucleus
T7468 446-454 Protein denotes Δ133p53β
T7467 437-441 Protein denotes p53γ
T7466 356-360 Protein denotes p53β
T7465 343-350 Protein denotes Δ133p53
T7464 338-341 Protein denotes p53
T7463 256-259 Protein denotes p53
T7462 242-252 Gene_expression denotes expression
T7461 39-42 Protein denotes p53
T7460 946-949 Protein denotes Bax
T7459 938-941 Protein denotes p21
T7458 906-909 Protein denotes p53
T7457 886-889 Protein denotes p53
T7456 872-880 Protein denotes Δ133p53γ
T7455 860-868 Protein denotes Δ133p53β
T7454 780-783 Protein denotes p53
T7453 728-735 Protein denotes Δ133p53
T7452 681-684 Protein denotes p53
T7451 662-669 Protein denotes Δ133p53
T7450 653-656 Protein denotes p53
T7449 604-607 Protein denotes p53
T7448 589-593 Protein denotes p53β
T7447 581-584 Protein denotes p53
T7446 499-507 Protein denotes Δ133p53γ
T7445 446-454 Protein denotes Δ133p53β
T7444 437-441 Protein denotes p53γ
T7443 356-360 Protein denotes p53β
T7442 343-350 Protein denotes Δ133p53
T7441 338-341 Protein denotes p53
T7440 256-259 Protein denotes p53
T7439 39-42 Protein denotes p53
R5199 T7463 T7462 themeOf p53,expression
R5200 T7483 T7482 themeOf Δ133p53β,expression
R5201 T7484 T7482 themeOf Δ133p53γ,expression
R5202 T7487 T7488 themeOf p53,transcriptional
R5203 T7488 T7486 themeOf transcriptional,affect

testone

Id Subject Object Predicate Lexical cue
T7438 843-856 Gene_expression denotes Co-expression
T7437 636-649 Gene_expression denotes co-expression
T7436 511-520 Localization denotes localized
T7435 946-949 Protein denotes Bax
T7434 938-941 Protein denotes p21
T7433 906-909 Protein denotes p53
T7432 886-889 Protein denotes p53
T7431 872-880 Protein denotes Δ133p53γ
T7430 860-868 Protein denotes Δ133p53β
T7429 780-783 Protein denotes p53
T7428 728-735 Protein denotes Δ133p53
T7427 681-684 Protein denotes p53
T7426 662-669 Protein denotes Δ133p53
T7425 653-656 Protein denotes p53
T7424 604-607 Protein denotes p53
T7423 589-593 Protein denotes p53β
T7422 581-584 Protein denotes p53
T7421 499-507 Protein denotes Δ133p53γ
T7420 446-454 Protein denotes Δ133p53β
T7419 437-441 Protein denotes p53γ
T7418 356-360 Protein denotes p53β
T7417 343-350 Protein denotes Δ133p53
T7416 338-341 Protein denotes p53
T7415 256-259 Protein denotes p53
T7414 39-42 Protein denotes p53
R5193 T7421 T7436 themeOf Δ133p53γ,localized
R5194 T7425 T7437 themeOf p53,co-expression
R5195 T7426 T7437 themeOf Δ133p53,co-expression
R5196 T7430 T7438 themeOf Δ133p53β,Co-expression
R5197 T7431 T7438 themeOf Δ133p53γ,Co-expression
R5198 T7432 T7438 themeOf p53,Co-expression

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7988 899-905 Regulation denotes affect
T7987 899-905 Regulation denotes affect
T7986 843-856 Gene_expression denotes Co-expression
T7985 843-856 Gene_expression denotes Co-expression
T7984 946-959 Protein denotes Bax promoters
T7983 938-941 Protein denotes p21
T7982 906-909 Protein denotes p53
T7981 886-889 Protein denotes p53
T7980 860-868 Protein denotes Δ133p53β
T7979 780-783 Protein denotes p53
T7978 728-735 Protein denotes Δ133p53
T7977 636-649 Gene_expression denotes co-expression
T7976 636-649 Gene_expression denotes co-expression
T7975 594-603 Positive_regulation denotes increases
T7974 594-603 Positive_regulation denotes increases
T7973 594-603 Positive_regulation denotes increases
T7972 594-603 Positive_regulation denotes increases
T7971 562-577 Positive_regulation denotes Co-transfection
T7970 562-577 Positive_regulation denotes Co-transfection
T7969 562-577 Gene_expression denotes Co-transfection
T7968 562-577 Gene_expression denotes Co-transfection
T7967 681-684 Protein denotes p53
T7966 662-669 Protein denotes Δ133p53
T7965 653-656 Protein denotes p53
T7964 604-607 Protein denotes p53
T7963 589-593 Protein denotes p53β
T7962 581-584 Protein denotes p53
T7961 511-520 Localization denotes localized
T7960 499-507 Protein denotes Δ133p53γ
T7959 459-468 Localization denotes localized
T7958 459-468 Localization denotes localized
T7957 459-468 Localization denotes localized
T7956 459-468 Localization denotes localized
T7955 488-497 Entity denotes cytoplasm
T7954 476-483 Entity denotes nucleus
T7953 446-454 Protein denotes Δ133p53β
T7952 437-441 Protein denotes p53γ
T7951 365-374 Localization denotes localized
T7950 365-374 Localization denotes localized
T7949 389-396 Entity denotes nucleus
T7948 356-360 Protein denotes p53β
T7947 326-350 Protein denotes Full-length p53, Δ133p53
T7946 242-252 Gene_expression denotes expression
T7945 256-268 Protein denotes p53 isoforms
T7944 39-42 Protein denotes p53
R5495 T7945 T7946 themeOf p53 isoforms,expression
R5496 T7947 T7950 themeOf "Full-length p53, Δ133p53",localized
R5497 T7948 T7951 themeOf p53β,localized
R5498 T7949 T7950 locationOf nucleus,localized
R5499 T7949 T7951 locationOf nucleus,localized
R5500 T7952 T7956 themeOf p53γ,localized
R5501 T7952 T7958 themeOf p53γ,localized
R5502 T7953 T7957 themeOf Δ133p53β,localized
R5503 T7953 T7959 themeOf Δ133p53β,localized
R5504 T7954 T7956 locationOf nucleus,localized
R5505 T7954 T7957 locationOf nucleus,localized
R5506 T7955 T7958 locationOf cytoplasm,localized
R5507 T7955 T7959 locationOf cytoplasm,localized
R5508 T7960 T7961 themeOf Δ133p53γ,localized
R5509 T7962 T7968 themeOf p53,Co-transfection
R5510 T7963 T7969 themeOf p53β,Co-transfection
R5511 T7965 T7976 themeOf p53,co-expression
R5512 T7966 T7977 themeOf Δ133p53,co-expression
R5513 T7968 T7970 themeOf Co-transfection,Co-transfection
R5514 T7968 T7972 themeOf Co-transfection,increases
R5515 T7968 T7974 themeOf Co-transfection,increases
R5516 T7969 T7971 themeOf Co-transfection,Co-transfection
R5517 T7969 T7973 themeOf Co-transfection,increases
R5518 T7969 T7975 themeOf Co-transfection,increases
R5519 T7970 T7972 causeOf Co-transfection,increases
R5520 T7970 T7973 causeOf Co-transfection,increases
R5521 T7971 T7974 causeOf Co-transfection,increases
R5522 T7971 T7975 causeOf Co-transfection,increases
R5523 T7980 T7985 themeOf Δ133p53β,Co-expression
R5524 T7981 T7986 themeOf p53,Co-expression
R5525 T7985 T7987 themeOf Co-expression,affect
R5526 T7986 T7988 themeOf Co-expression,affect

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7999 68-70 TO denotes to
T7998 64-67 JJ denotes due
T7997 53-63 VBN denotes identified
T7996 48-52 VBN denotes been
T7995 43-47 VBP denotes have
T7994 39-42 NN denotes p53
T7993 36-38 IN denotes of
T7992 27-35 NNS denotes isoforms
T7991 22-26 CD denotes nine
T7990 16-21 JJS denotes least
T7989 13-15 IN denotes At
T8169 981-982 . denotes .
T8168 972-981 NN denotes apoptosis
T8167 969-971 IN denotes as
T8166 964-968 RB denotes well
T8165 961-963 RB denotes as
T8164 959-960 , denotes ,
T8163 950-959 NNS denotes promoters
T8162 946-949 NNP denotes Bax
T8161 942-945 CC denotes and
T8160 938-941 CD denotes p21
T8159 935-937 IN denotes on
T8158 926-934 NN denotes activity
T8157 910-925 JJ denotes transcriptional
T8156 906-909 NN denotes p53
T8155 899-905 VB denotes affect
T8154 895-898 RB denotes not
T8153 890-894 VBZ denotes does
T8152 886-889 NN denotes p53
T8151 881-885 IN denotes with
T8150 872-880 NNP denotes Δ133p53γ
T8149 869-871 CC denotes or
T8148 860-868 NNP denotes Δ133p53β
T8147 857-859 IN denotes of
T8146 843-856 NN denotes Co-expression
T8145 841-842 . denotes .
T8144 840-841 -RRB- denotes )
T8143 836-840 CD denotes 2011
T8142 834-835 , denotes ,
T8141 831-834 FW denotes al.
T8140 828-830 FW denotes et
T8139 820-827 NNP denotes Aoubala
T8138 819-820 -LRB- denotes (
T8137 811-818 NNS denotes manners
T8136 799-810 JJ denotes independent
T8135 798-799 : denotes -
T8134 794-797 CC denotes and
T8133 780-793 JJ denotes p53-dependent
T8132 777-779 IN denotes in
T8131 766-776 NN denotes expression
T8130 761-765 NN denotes gene
T8129 751-760 VBZ denotes regulates
T8128 736-750 RB denotes differentially
T8127 728-735 JJ denotes Δ133p53
T8126 726-727 . denotes .
T8125 725-726 -RRB- denotes )
T8124 721-725 CD denotes 2005
T8123 719-720 , denotes ,
T8122 716-719 FW denotes al.
T8121 713-715 FW denotes et
T8120 705-712 NNP denotes Bourdon
T8119 704-705 -LRB- denotes (
T8118 694-703 NN denotes apoptosis
T8117 681-693 JJ denotes p53-mediated
T8116 670-680 NNS denotes suppresses
T8115 662-669 JJ denotes Δ133p53
T8114 657-661 IN denotes with
T8113 653-656 NN denotes p53
T8112 650-652 IN denotes of
T8111 636-649 NN denotes co-expression
T8110 628-635 IN denotes whereas
T8109 626-627 , denotes ,
T8108 617-626 NN denotes apoptosis
T8107 604-616 JJ denotes p53-mediated
T8106 594-603 NNS denotes increases
T8105 589-593 JJ denotes p53β
T8104 585-588 CC denotes and
T8103 581-584 NN denotes p53
T8102 578-580 IN denotes of
T8101 562-577 NN denotes Co-transfection
T8100 560-561 . denotes .
T8099 559-560 -RRB- denotes )
T8098 555-559 CD denotes 2005
T8097 553-554 , denotes ,
T8096 550-553 FW denotes al.
T8095 547-549 FW denotes et
T8094 539-546 NNP denotes Bourdon
T8093 538-539 -LRB- denotes (
T8092 528-537 NN denotes cytoplasm
T8091 524-527 DT denotes the
T8090 521-523 IN denotes in
T8089 511-520 VBN denotes localized
T8088 508-510 VBZ denotes is
T8087 499-507 NNP denotes Δ133p53γ
T8086 497-498 . denotes .
T8085 488-497 NN denotes cytoplasm
T8084 484-487 CC denotes and
T8083 476-483 NN denotes nucleus
T8082 472-475 DT denotes the
T8081 469-471 IN denotes in
T8080 459-468 VBN denotes localized
T8079 455-458 VBP denotes are
T8078 446-454 NNP denotes Δ133p53β
T8077 442-445 CC denotes and
T8076 437-441 CD denotes p53γ
T8075 435-436 . denotes .
T8074 426-435 NN denotes cytoplasm
T8073 423-425 IN denotes in
T8072 419-422 VBP denotes are
T8071 414-418 PRP denotes them
T8070 411-413 IN denotes of
T8069 407-410 JJ denotes few
T8068 402-406 RB denotes only
T8067 398-401 CC denotes and
T8066 396-397 , denotes ,
T8065 389-396 NN denotes nucleus
T8064 385-388 DT denotes the
T8063 382-384 IN denotes in
T8062 375-381 RB denotes mainly
T8061 365-374 VBN denotes localized
T8060 361-364 VBP denotes are
T8059 356-360 CD denotes p53β
T8058 352-355 CC denotes and
T8057 350-351 , denotes ,
T8056 343-350 NNP denotes Δ133p53
T8055 341-342 , denotes ,
T8054 338-341 NN denotes p53
T8053 326-337 JJ denotes Full-length
T8052 324-325 . denotes .
T8051 323-324 -RRB- denotes )
T8050 319-323 CD denotes 2007
T8049 317-318 , denotes ,
T8048 310-317 NNP denotes Bourdon
T8047 308-309 : denotes ;
T8046 304-308 CD denotes 2005
T8045 302-303 , denotes ,
T8044 299-302 FW denotes al.
T8043 296-298 FW denotes et
T8042 288-295 NNP denotes Bourdon
T8041 287-288 -LRB- denotes (
T8040 276-286 RB denotes frequently
T8039 269-275 VBZ denotes occurs
T8038 260-268 NNS denotes isoforms
T8037 256-259 NN denotes p53
T8036 253-255 IN denotes of
T8035 242-252 NN denotes expression
T8034 233-241 JJ denotes aberrant
T8033 231-232 , denotes ,
T8032 224-231 NNS denotes cancers
T8031 221-223 IN denotes In
T8030 219-220 . denotes .
T8029 218-219 -RRB- denotes )
T8028 217-218 CD denotes 2
T8027 210-216 NN denotes Figure
T8026 208-209 : denotes ;
T8025 204-208 CD denotes 2006
T8024 202-203 , denotes ,
T8023 199-202 FW denotes al.
T8022 196-198 FW denotes et
T8021 192-195 NNP denotes Ray
T8020 190-191 : denotes ;
T8019 186-190 CD denotes 2004
T8018 184-185 , denotes ,
T8017 181-184 FW denotes al.
T8016 178-180 FW denotes et
T8015 172-177 NNP denotes Ghosh
T8014 171-172 -LRB- denotes (
T8013 159-170 NN denotes translation
T8012 156-158 IN denotes of
T8011 150-155 NNS denotes sites
T8010 139-149 NN denotes initiation
T8009 127-138 JJ denotes alternative
T8008 123-126 CC denotes and
T8007 121-122 , denotes ,
T8006 112-121 NNS denotes promoters
T8005 107-111 NN denotes gene
T8004 98-106 JJ denotes multiple
T8003 96-97 , denotes ,
T8002 88-96 NN denotes splicing
T8001 83-87 NNP denotes mRNA
T8000 71-82 JJ denotes alternative
R5527 T7989 T7990 advmod At,least
R5528 T7990 T7991 advmod least,nine
R5529 T7991 T7992 nummod nine,isoforms
R5530 T7992 T7997 nsubjpass isoforms,identified
R5531 T7993 T7992 prep of,isoforms
R5532 T7994 T7993 pobj p53,of
R5533 T7995 T7997 aux have,identified
R5534 T7996 T7997 auxpass been,identified
R5535 T7997 T7997 ROOT identified,identified
R5536 T7998 T8002 amod due,splicing
R5537 T7999 T8000 aux to,alternative
R5538 T8000 T7998 xcomp alternative,due
R5539 T8001 T8002 compound mRNA,splicing
R5540 T8002 T7997 dobj splicing,identified
R5541 T8003 T8002 punct ",",splicing
R5542 T8004 T8006 amod multiple,promoters
R5543 T8005 T8006 compound gene,promoters
R5544 T8006 T8002 conj promoters,splicing
R5545 T8007 T8006 punct ",",promoters
R5546 T8008 T8006 cc and,promoters
R5547 T8009 T8011 amod alternative,sites
R5548 T8010 T8011 compound initiation,sites
R5549 T8011 T8006 conj sites,promoters
R5550 T8012 T8011 prep of,sites
R5551 T8013 T8012 pobj translation,of
R5552 T8014 T8002 punct (,splicing
R5553 T8015 T8017 compound Ghosh,al.
R5554 T8016 T8017 nmod et,al.
R5555 T8017 T8002 appos al.,splicing
R5556 T8018 T8017 punct ",",al.
R5557 T8019 T8017 appos 2004,al.
R5558 T8020 T8002 punct ;,splicing
R5559 T8021 T8023 compound Ray,al.
R5560 T8022 T8023 nmod et,al.
R5561 T8023 T8002 conj al.,splicing
R5562 T8024 T8023 punct ",",al.
R5563 T8025 T8023 appos 2006,al.
R5564 T8026 T8023 punct ;,al.
R5565 T8027 T8023 appos Figure,al.
R5566 T8028 T8027 nummod 2,Figure
R5567 T8029 T8023 punct ),al.
R5568 T8030 T7997 punct .,identified
R5569 T8031 T8039 prep In,occurs
R5570 T8032 T8031 pobj cancers,In
R5571 T8033 T8035 punct ",",expression
R5572 T8034 T8035 amod aberrant,expression
R5573 T8035 T8039 nsubj expression,occurs
R5574 T8036 T8035 prep of,expression
R5575 T8037 T8038 compound p53,isoforms
R5576 T8038 T8036 pobj isoforms,of
R5577 T8039 T8039 ROOT occurs,occurs
R5578 T8040 T8039 advmod frequently,occurs
R5579 T8041 T8044 punct (,al.
R5580 T8042 T8044 nmod Bourdon,al.
R5581 T8043 T8044 nmod et,al.
R5582 T8044 T8039 parataxis al.,occurs
R5583 T8045 T8044 punct ",",al.
R5584 T8046 T8044 npadvmod 2005,al.
R5585 T8047 T8048 punct ;,Bourdon
R5586 T8048 T8039 nsubj Bourdon,occurs
R5587 T8049 T8048 punct ",",Bourdon
R5588 T8050 T8048 npadvmod 2007,Bourdon
R5589 T8051 T8048 punct ),Bourdon
R5590 T8052 T8039 punct .,occurs
R5591 T8053 T8054 amod Full-length,p53
R5592 T8054 T8061 nsubjpass p53,localized
R5593 T8055 T8054 punct ",",p53
R5594 T8056 T8054 conj Δ133p53,p53
R5595 T8057 T8056 punct ",",Δ133p53
R5596 T8058 T8056 cc and,Δ133p53
R5597 T8059 T8056 conj p53β,Δ133p53
R5598 T8060 T8061 auxpass are,localized
R5599 T8061 T8061 ROOT localized,localized
R5600 T8062 T8063 advmod mainly,in
R5601 T8063 T8061 prep in,localized
R5602 T8064 T8065 det the,nucleus
R5603 T8065 T8063 pobj nucleus,in
R5604 T8066 T8061 punct ",",localized
R5605 T8067 T8061 cc and,localized
R5606 T8068 T8069 advmod only,few
R5607 T8069 T8072 nsubj few,are
R5608 T8070 T8069 prep of,few
R5609 T8071 T8070 pobj them,of
R5610 T8072 T8061 conj are,localized
R5611 T8073 T8072 prep in,are
R5612 T8074 T8073 pobj cytoplasm,in
R5613 T8075 T8072 punct .,are
R5614 T8076 T8080 nsubjpass p53γ,localized
R5615 T8077 T8076 cc and,p53γ
R5616 T8078 T8076 conj Δ133p53β,p53γ
R5617 T8079 T8080 auxpass are,localized
R5618 T8080 T8080 ROOT localized,localized
R5619 T8081 T8080 prep in,localized
R5620 T8082 T8083 det the,nucleus
R5621 T8083 T8081 pobj nucleus,in
R5622 T8084 T8083 cc and,nucleus
R5623 T8085 T8083 conj cytoplasm,nucleus
R5624 T8086 T8080 punct .,localized
R5625 T8087 T8089 nsubjpass Δ133p53γ,localized
R5626 T8088 T8089 auxpass is,localized
R5627 T8089 T8089 ROOT localized,localized
R5628 T8090 T8089 prep in,localized
R5629 T8091 T8092 det the,cytoplasm
R5630 T8092 T8090 pobj cytoplasm,in
R5631 T8093 T8096 punct (,al.
R5632 T8094 T8096 compound Bourdon,al.
R5633 T8095 T8096 nmod et,al.
R5634 T8096 T8089 npadvmod al.,localized
R5635 T8097 T8096 punct ",",al.
R5636 T8098 T8096 npadvmod 2005,al.
R5637 T8099 T8096 punct ),al.
R5638 T8100 T8089 punct .,localized
R5639 T8101 T8106 nmod Co-transfection,increases
R5640 T8102 T8101 prep of,Co-transfection
R5641 T8103 T8102 pobj p53,of
R5642 T8104 T8103 cc and,p53
R5643 T8105 T8106 amod p53β,increases
R5644 T8106 T8106 ROOT increases,increases
R5645 T8107 T8108 compound p53-mediated,apoptosis
R5646 T8108 T8106 dobj apoptosis,increases
R5647 T8109 T8106 punct ",",increases
R5648 T8110 T8122 nmod whereas,al.
R5649 T8111 T8122 dep co-expression,al.
R5650 T8112 T8111 prep of,co-expression
R5651 T8113 T8112 pobj p53,of
R5652 T8114 T8111 prep with,co-expression
R5653 T8115 T8116 amod Δ133p53,suppresses
R5654 T8116 T8114 pobj suppresses,with
R5655 T8117 T8118 nmod p53-mediated,apoptosis
R5656 T8118 T8111 conj apoptosis,co-expression
R5657 T8119 T8122 punct (,al.
R5658 T8120 T8122 compound Bourdon,al.
R5659 T8121 T8122 nmod et,al.
R5660 T8122 T8106 advcl al.,increases
R5661 T8123 T8122 punct ",",al.
R5662 T8124 T8122 npadvmod 2005,al.
R5663 T8125 T8122 punct ),al.
R5664 T8126 T8106 punct .,increases
R5665 T8127 T8129 nsubj Δ133p53,regulates
R5666 T8128 T8129 advmod differentially,regulates
R5667 T8129 T8129 ROOT regulates,regulates
R5668 T8130 T8131 compound gene,expression
R5669 T8131 T8129 dobj expression,regulates
R5670 T8132 T8131 prep in,expression
R5671 T8133 T8132 pobj p53-dependent,in
R5672 T8134 T8129 cc and,regulates
R5673 T8135 T8129 punct -,regulates
R5674 T8136 T8137 amod independent,manners
R5675 T8137 T8129 conj manners,regulates
R5676 T8138 T8137 punct (,manners
R5677 T8139 T8141 compound Aoubala,al.
R5678 T8140 T8141 nmod et,al.
R5679 T8141 T8137 appos al.,manners
R5680 T8142 T8141 punct ",",al.
R5681 T8143 T8141 npadvmod 2011,al.
R5682 T8144 T8137 punct ),manners
R5683 T8145 T8129 punct .,regulates
R5684 T8146 T8155 nsubj Co-expression,affect
R5685 T8147 T8146 prep of,Co-expression
R5686 T8148 T8147 pobj Δ133p53β,of
R5687 T8149 T8148 cc or,Δ133p53β
R5688 T8150 T8148 conj Δ133p53γ,Δ133p53β
R5689 T8151 T8146 prep with,Co-expression
R5690 T8152 T8151 pobj p53,with
R5691 T8153 T8155 aux does,affect
R5692 T8154 T8155 neg not,affect
R5693 T8155 T8155 ROOT affect,affect
R5694 T8156 T8158 nmod p53,activity
R5695 T8157 T8158 compound transcriptional,activity
R5696 T8158 T8155 dobj activity,affect
R5697 T8159 T8158 prep on,activity
R5698 T8160 T8159 pobj p21,on
R5699 T8161 T8155 cc and,affect
R5700 T8162 T8163 compound Bax,promoters
R5701 T8163 T8163 ROOT promoters,promoters
R5702 T8164 T8163 punct ",",promoters
R5703 T8165 T8167 advmod as,as
R5704 T8166 T8167 advmod well,as
R5705 T8167 T8163 cc as,promoters
R5706 T8168 T8163 conj apoptosis,promoters
R5707 T8169 T8155 punct .,affect

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue Negation
T8259 636-669 Gene_expression denotes co-expression of p53 with Δ133p53
T8258 437-497 Localization denotes p53γ and Δ133p53β are localized in the nucleus and cytoplasm
T8257 437-497 Localization denotes p53γ and Δ133p53β are localized in the nucleus and cytoplasm
T8256 761-793 Regulation denotes gene expression in p53-dependent
T8255 499-560 Localization denotes Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005)
T8254 71-122 Binding denotes alternative mRNA splicing, multiple gene promoters,
T8253 843-889 Gene_expression denotes Co-expression of Δ133p53β or Δ133p53γ with p53
T8252 843-889 Gene_expression denotes Co-expression of Δ133p53β or Δ133p53γ with p53
T8251 843-925 Regulation denotes Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional true
T8250 843-925 Regulation denotes Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional true
T8249 728-810 Regulation denotes Δ133p53 differentially regulates gene expression in p53-dependent and -independent
T8248 636-680 Negative_regulation denotes co-expression of p53 with Δ133p53 suppresses
T8247 650-656 Protein denotes of p53
T8246 589-593 Protein denotes p53β
T8245 780-793 Protein denotes p53-dependent
T8244 192-195 Protein denotes Ray
T8243 253-268 Protein denotes of p53 isoforms
T8242 604-616 Protein denotes p53-mediated
T8241 98-121 Entity denotes multiple gene promoters
T8240 521-560 Entity denotes in the cytoplasm (Bourdon et al., 2005)
T8239 356-360 Protein denotes p53β
T8238 446-454 Protein denotes Δ133p53β
T8237 326-341 Protein denotes Full-length p53
T8236 39-42 Protein denotes p53
T8235 385-397 Entity denotes the nucleus,
T8234 472-483 Entity denotes the nucleus
T8233 437-441 Protein denotes p53γ
T8232 946-959 Entity denotes Bax promoters
T8231 886-889 Protein denotes p53
T8230 426-435 Entity denotes cytoplasm
T8229 581-584 Protein denotes p53
T8228 728-735 Protein denotes Δ133p53
T8227 938-941 Protein denotes p21
T8226 860-868 Protein denotes Δ133p53β
T8225 681-684 Protein denotes p53
T8224 906-909 Protein denotes p53
T8223 343-350 Protein denotes Δ133p53
T8222 499-560 Protein denotes Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005)
T8221 326-341 Protein denotes Full-length p53
T8220 662-669 Protein denotes Δ133p53
T8219 946-949 Protein denotes Bax
T8218 98-121 Protein denotes multiple gene promoters
T8217 872-880 Protein denotes Δ133p53γ
T8216 83-87 Protein denotes mRNA
T8215 488-497 Entity denotes cytoplasm
R5740 T8215 T8257 locationOf cytoplasm,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5741 T8215 T8258 locationOf cytoplasm,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5742 T8216 T8254 themeOf mRNA,"alternative mRNA splicing, multiple gene promoters,"
R5743 T8217 T8252 themeOf Δ133p53γ,Co-expression of Δ133p53β or Δ133p53γ with p53
R5744 T8222 T8255 themeOf "Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005)","Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005)"
R5745 T8224 T8250 themeOf p53,Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional
R5746 T8224 T8251 themeOf p53,Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional
R5747 T8226 T8253 themeOf Δ133p53β,Co-expression of Δ133p53β or Δ133p53γ with p53
R5748 T8228 T8249 causeOf Δ133p53,Δ133p53 differentially regulates gene expression in p53-dependent and -independent
R5749 T8232 T8219 partOf Bax promoters,Bax
R5750 T8233 T8258 themeOf p53γ,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5751 T8234 T8257 locationOf the nucleus,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5752 T8234 T8258 locationOf the nucleus,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5753 T8238 T8257 themeOf Δ133p53β,p53γ and Δ133p53β are localized in the nucleus and cytoplasm
R5754 T8240 T8255 locationOf "in the cytoplasm (Bourdon et al., 2005)","Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005)"
R5755 T8245 T8256 causeOf p53-dependent,gene expression in p53-dependent
R5756 T8247 T8259 themeOf of p53,co-expression of p53 with Δ133p53
R5757 T8252 T8250 causeOf Co-expression of Δ133p53β or Δ133p53γ with p53,Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional
R5758 T8253 T8251 causeOf Co-expression of Δ133p53β or Δ133p53γ with p53,Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional
R5759 T8259 T8248 themeOf co-expression of p53 with Δ133p53,co-expression of p53 with Δ133p53 suppresses

DLUT931

Id Subject Object Predicate Lexical cue
T7885 899-905 Regulation denotes affect
T7884 843-856 Gene_expression denotes Co-expression
T7883 636-649 Gene_expression denotes co-expression
T7882 594-603 Positive_regulation denotes increases
T7881 562-577 Gene_expression denotes Co-transfection
T7880 511-520 Localization denotes localized
T7879 459-468 Localization denotes localized
T7878 365-374 Localization denotes localized
T7877 242-252 Gene_expression denotes expression
T7876 946-949 Protein denotes Bax
T7875 938-941 Protein denotes p21
T7874 906-909 Protein denotes p53
T7873 886-889 Protein denotes p53
T7872 872-880 Protein denotes Δ133p53γ
T7871 860-868 Protein denotes Δ133p53β
T7870 780-783 Protein denotes p53
T7869 728-735 Protein denotes Δ133p53
T7868 581-584 Protein denotes p53
T7867 681-684 Protein denotes p53
T7866 662-669 Protein denotes Δ133p53
T7865 653-656 Protein denotes p53
T7864 604-607 Protein denotes p53
T7863 589-593 Protein denotes p53β
T7862 499-507 Protein denotes Δ133p53γ
T7861 446-454 Protein denotes Δ133p53β
T7860 437-441 Protein denotes p53γ
T7859 356-360 Protein denotes p53β
T7858 343-350 Protein denotes Δ133p53
T7857 338-341 Protein denotes p53
T7856 256-259 Protein denotes p53
T7855 39-42 Protein denotes p53
R5448 T7856 T7877 themeOf p53,expression
R5449 T7857 T7878 themeOf p53,localized
R5450 T7858 T7878 themeOf Δ133p53,localized
R5451 T7859 T7878 themeOf p53β,localized
R5452 T7860 T7879 themeOf p53γ,localized
R5453 T7861 T7879 themeOf Δ133p53β,localized
R5454 T7862 T7880 themeOf Δ133p53γ,localized
R5455 T7863 T7881 themeOf p53β,Co-transfection
R5456 T7865 T7883 themeOf p53,co-expression
R5457 T7866 T7883 themeOf Δ133p53,co-expression
R5458 T7868 T7881 themeOf p53,Co-transfection
R5459 T7871 T7884 themeOf Δ133p53β,Co-expression
R5460 T7872 T7884 themeOf Δ133p53γ,Co-expression
R5461 T7873 T7884 themeOf p53,Co-expression
R5462 T7876 T7885 themeOf Bax,affect
R5463 T7876 T7885 themeOf Bax,affect
R5464 T7876 T7885 themeOf Bax,affect
R5465 T7881 T7882 themeOf Co-transfection,increases
R5466 T7881 T7882 themeOf Co-transfection,increases
R5467 T7884 T7885 causeOf Co-expression,affect
R5468 T7884 T7885 causeOf Co-expression,affect
R5469 T7884 T7885 causeOf Co-expression,affect

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T7943 843-856 Gene_expression denotes Co-expression
T7942 751-760 Regulation denotes regulates
T7941 766-776 Gene_expression denotes expression
T7940 636-649 Gene_expression denotes co-expression
T7939 562-577 Gene_expression denotes Co-transfection
T7938 511-520 Localization denotes localized
T7937 459-468 Localization denotes localized
T7936 365-374 Localization denotes localized
T7935 242-252 Gene_expression denotes expression
T7934 946-949 Protein denotes Bax
T7933 938-941 Protein denotes p21
T7932 906-909 Protein denotes p53
T7931 886-889 Protein denotes p53
T7930 872-880 Protein denotes Δ133p53γ
T7929 860-868 Protein denotes Δ133p53β
T7928 780-783 Protein denotes p53
T7927 728-735 Protein denotes Δ133p53
T7926 581-584 Protein denotes p53
T7925 681-684 Protein denotes p53
T7924 662-669 Protein denotes Δ133p53
T7923 653-656 Protein denotes p53
T7922 604-607 Protein denotes p53
T7921 589-593 Protein denotes p53β
T7920 499-507 Protein denotes Δ133p53γ
T7919 446-454 Protein denotes Δ133p53β
T7918 437-441 Protein denotes p53γ
T7917 356-360 Protein denotes p53β
T7916 343-350 Protein denotes Δ133p53
T7915 338-341 Protein denotes p53
T7914 256-259 Protein denotes p53
T7913 39-42 Protein denotes p53
R5478 T7914 T7935 themeOf p53,expression
R5479 T7915 T7936 themeOf p53,localized
R5480 T7916 T7936 themeOf Δ133p53,localized
R5481 T7917 T7936 themeOf p53β,localized
R5482 T7918 T7937 themeOf p53γ,localized
R5483 T7919 T7937 themeOf Δ133p53β,localized
R5484 T7920 T7938 themeOf Δ133p53γ,localized
R5485 T7921 T7939 themeOf p53β,Co-transfection
R5486 T7923 T7940 themeOf p53,co-expression
R5487 T7924 T7940 themeOf Δ133p53,co-expression
R5488 T7926 T7939 themeOf p53,Co-transfection
R5489 T7927 T7942 causeOf Δ133p53,regulates
R5490 T7927 T7941 themeOf Δ133p53,expression
R5491 T7929 T7943 themeOf Δ133p53β,Co-expression
R5492 T7930 T7943 themeOf Δ133p53γ,Co-expression
R5493 T7931 T7943 themeOf p53,Co-expression
R5494 T7941 T7942 themeOf expression,regulates

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7822 899-905 Regulation denotes affect
T7821 843-856 Gene_expression denotes Co-expression
T7820 751-760 Regulation denotes regulates
T7819 562-577 Gene_expression denotes Co-transfection
T7818 636-649 Gene_expression denotes co-expression
T7817 511-520 Localization denotes localized
T7816 459-468 Localization denotes localized
T7815 365-374 Localization denotes localized
T7814 242-252 Gene_expression denotes expression
T7813 946-949 Protein denotes Bax
T7812 938-941 Protein denotes p21
T7811 906-909 Protein denotes p53
T7810 886-889 Protein denotes p53
T7809 872-880 Protein denotes Δ133p53γ
T7808 860-868 Protein denotes Δ133p53β
T7807 780-783 Protein denotes p53
T7806 728-735 Protein denotes Δ133p53
T7805 581-584 Protein denotes p53
T7804 681-684 Protein denotes p53
T7803 662-669 Protein denotes Δ133p53
T7802 653-656 Protein denotes p53
T7801 604-607 Protein denotes p53
T7800 589-593 Protein denotes p53β
T7799 499-507 Protein denotes Δ133p53γ
T7798 446-454 Protein denotes Δ133p53β
T7797 437-441 Protein denotes p53γ
T7796 356-360 Protein denotes p53β
T7795 343-350 Protein denotes Δ133p53
T7794 338-341 Protein denotes p53
T7793 256-259 Protein denotes p53
T7792 39-42 Protein denotes p53
R5426 T7793 T7814 themeOf p53,expression
R5427 T7794 T7815 themeOf p53,localized
R5428 T7795 T7815 themeOf Δ133p53,localized
R5429 T7796 T7815 themeOf p53β,localized
R5430 T7797 T7816 themeOf p53γ,localized
R5431 T7798 T7816 themeOf Δ133p53β,localized
R5432 T7799 T7817 themeOf Δ133p53γ,localized
R5433 T7800 T7819 themeOf p53β,Co-transfection
R5434 T7802 T7818 themeOf p53,co-expression
R5435 T7803 T7818 themeOf Δ133p53,co-expression
R5436 T7805 T7819 themeOf p53,Co-transfection
R5437 T7806 T7820 themeOf Δ133p53,regulates
R5438 T7808 T7821 themeOf Δ133p53β,Co-expression
R5439 T7809 T7821 themeOf Δ133p53γ,Co-expression
R5440 T7810 T7821 themeOf p53,Co-expression
R5441 T7811 T7822 themeOf p53,affect

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7832 906-909 http://www.uniprot.org/uniprot/P04637 denotes p53
T7831 886-889 http://www.uniprot.org/uniprot/P04637 denotes p53
T7830 780-783 http://www.uniprot.org/uniprot/P04637 denotes p53
T7829 681-684 http://www.uniprot.org/uniprot/P04637 denotes p53
T7828 653-656 http://www.uniprot.org/uniprot/P04637 denotes p53
T7827 604-607 http://www.uniprot.org/uniprot/P04637 denotes p53
T7826 581-584 http://www.uniprot.org/uniprot/P04637 denotes p53
T7825 338-341 http://www.uniprot.org/uniprot/P04637 denotes p53
T7824 256-259 http://www.uniprot.org/uniprot/P04637 denotes p53
T7823 39-42 http://www.uniprot.org/uniprot/P04637 denotes p53

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T7561 589-593 Protein denotes p53β
T7560 581-584 Protein denotes p53
T7559 499-507 Protein denotes Δ133p53γ
T7558 446-454 Protein denotes Δ133p53β
T7557 437-441 Protein denotes p53γ
T7556 356-360 Protein denotes p53β
T7555 343-350 Protein denotes Δ133p53
T7554 338-341 Protein denotes p53
T7553 256-259 Protein denotes p53
T7552 39-42 Protein denotes p53
T7573 946-949 Protein denotes Bax
T7572 938-941 Protein denotes p21
T7571 906-909 Protein denotes p53
T7570 886-889 Protein denotes p53
T7569 872-880 Protein denotes Δ133p53γ
T7568 860-868 Protein denotes Δ133p53β
T7567 780-783 Protein denotes p53
T7566 728-735 Protein denotes Δ133p53
T7565 681-684 Protein denotes p53
T7564 662-669 Protein denotes Δ133p53
T7563 653-656 Protein denotes p53
T7562 604-607 Protein denotes p53

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T7551 356-360 Antecedent denotes p53β
T7550 343-350 Antecedent denotes Δ133p53
T7549 338-341 Antecedent denotes p53
T7548 414-418 Anaphor denotes them
R5247 T7548 T7549 boundBy them,p53
R5248 T7548 T7550 boundBy them,Δ133p53
R5249 T7548 T7551 boundBy them,p53β

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7791 972-981 NN denotes apoptosis
T7790 969-971 IN denotes as
T7789 964-968 RB denotes well
T7788 961-963 RB denotes as
T7787 959-960 -COMMA- denotes ,
T7786 950-959 NN denotes promoters
T7785 946-949 NN denotes Bax
T7784 942-945 CC denotes and
T7743 681-693 JJ denotes p53-mediated
T7742 670-680 VB denotes suppresses
T7741 662-669 NN denotes Δ133p53
T7740 657-661 IN denotes with
T7739 653-656 NN denotes p53
T7738 650-652 IN denotes of
T7737 636-649 NN denotes co-expression
T7736 628-635 IN denotes whereas
T7735 626-627 -COMMA- denotes ,
T7734 617-626 NN denotes apoptosis
T7733 604-616 JJ denotes p53-mediated
T7732 594-603 VB denotes increases
T7731 589-593 NN denotes p53β
T7730 585-588 CC denotes and
T7729 581-584 NN denotes p53
T7728 578-580 IN denotes of
T7727 562-577 NN denotes Co-transfection
T7726 559-560 -RRB- denotes )
T7725 555-559 CD denotes 2005
T7724 553-554 -COMMA- denotes ,
T7723 550-553 FW denotes al.
T7722 547-549 FW denotes et
T7721 539-546 NNP denotes Bourdon
T7720 538-539 -LRB- denotes (
T7719 528-537 NN denotes cytoplasm
T7718 524-527 DT denotes the
T7717 521-523 IN denotes in
T7716 511-520 JJ denotes localized
T7715 508-510 VB denotes is
T7714 499-507 NN denotes Δ133p53γ
T7713 488-498 NN denotes cytoplasm.
T7712 484-487 CC denotes and
T7711 476-483 NN denotes nucleus
T7710 472-475 DT denotes the
T7709 469-471 IN denotes in
T7708 459-468 VB denotes localized
T7707 455-458 VB denotes are
T7706 446-454 NN denotes Δ133p53β
T7705 442-445 CC denotes and
T7704 437-441 NN denotes p53γ
T7703 426-436 NN denotes cytoplasm.
T7702 423-425 IN denotes in
T7701 419-422 VB denotes are
T7700 414-418 PRP denotes them
T7699 411-413 IN denotes of
T7698 407-410 JJ denotes few
T7697 402-406 RB denotes only
T7696 398-401 CC denotes and
T7695 396-397 -COMMA- denotes ,
T7694 389-396 NN denotes nucleus
T7693 385-388 DT denotes the
T7692 382-384 IN denotes in
T7691 375-381 RB denotes mainly
T7690 365-374 VB denotes localized
T7689 361-364 VB denotes are
T7688 356-360 NN denotes p53β
T7687 352-355 CC denotes and
T7686 350-351 -COMMA- denotes ,
T7685 343-350 NN denotes Δ133p53
T7684 341-342 -COMMA- denotes ,
T7683 338-341 NN denotes p53
T7682 326-337 JJ denotes Full-length
T7681 323-324 -RRB- denotes )
T7680 319-323 CD denotes 2007
T7679 317-318 -COMMA- denotes ,
T7678 310-317 NNP denotes Bourdon
T7677 308-309 -COLON- denotes ;
T7676 304-308 CD denotes 2005
T7675 302-303 -COMMA- denotes ,
T7674 299-302 FW denotes al.
T7673 296-298 FW denotes et
T7672 288-295 NNP denotes Bourdon
T7671 287-288 -LRB- denotes (
T7670 276-286 RB denotes frequently
T7669 269-275 VB denotes occurs
T7668 260-268 NN denotes isoforms
T7667 256-259 NN denotes p53
T7666 253-255 IN denotes of
T7665 242-252 NN denotes expression
T7664 233-241 JJ denotes aberrant
T7663 231-232 -COMMA- denotes ,
T7662 224-231 NN denotes cancers
T7661 221-223 IN denotes In
T7660 218-219 -RRB- denotes )
T7659 217-218 CD denotes 2
T7658 210-216 NN denotes Figure
T7657 208-209 -COLON- denotes ;
T7656 204-208 CD denotes 2006
T7655 202-203 -COMMA- denotes ,
T7654 199-202 FW denotes al.
T7653 196-198 FW denotes et
T7652 192-195 NNP denotes Ray
T7651 190-191 -COLON- denotes ;
T7650 186-190 CD denotes 2004
T7649 184-185 -COMMA- denotes ,
T7648 181-184 FW denotes al.
T7647 178-180 FW denotes et
T7646 172-177 NNP denotes Ghosh
T7645 171-172 -LRB- denotes (
T7644 159-170 NN denotes translation
T7643 156-158 IN denotes of
T7642 150-155 NN denotes sites
T7641 139-149 NN denotes initiation
T7640 127-138 JJ denotes alternative
T7639 123-126 CC denotes and
T7638 121-122 -COMMA- denotes ,
T7637 112-121 NN denotes promoters
T7636 107-111 NN denotes gene
T7635 98-106 JJ denotes multiple
T7634 96-97 -COMMA- denotes ,
T7633 88-96 NN denotes splicing
T7632 83-87 NN denotes mRNA
T7631 71-82 JJ denotes alternative
T7630 68-70 TO denotes to
T7629 64-67 JJ denotes due
T7628 53-63 VB denotes identified
T7627 48-52 VB denotes been
T7626 43-47 VB denotes have
T7625 39-42 NN denotes p53
T7624 36-38 IN denotes of
T7623 27-35 NN denotes isoforms
T7622 22-26 CD denotes nine
T7621 16-21 JJ denotes least
T7620 13-15 IN denotes At
T7783 938-941 NN denotes p21
T7782 935-937 IN denotes on
T7781 926-934 NN denotes activity
T7780 910-925 JJ denotes transcriptional
T7779 906-909 NN denotes p53
T7778 899-905 VB denotes affect
T7777 895-898 RB denotes not
T7776 890-894 VB denotes does
T7775 886-889 NN denotes p53
T7774 881-885 IN denotes with
T7773 872-880 NN denotes Δ133p53γ
T7772 869-871 CC denotes or
T7771 860-868 NN denotes Δ133p53β
T7770 857-859 IN denotes of
T7769 843-856 NN denotes Co-expression
T7768 828-829 -RRB- denotes e
T7767 823-827 CD denotes bala
T7766 822-823 -COMMA- denotes u
T7765 819-822 FW denotes (Ao
T7764 816-818 FW denotes rs
T7763 809-816 NNP denotes t manne
T7762 808-809 -LRB- denotes n
T7761 801-808 NN denotes depende
T7760 789-801 JJ denotes dent and -in
T7759 786-789 CC denotes pen
T7758 773-786 JJ denotes ion in p53-de
T7757 771-773 IN denotes ss
T7756 761-771 NN denotes gene expre
T7755 756-760 NN denotes ates
T7754 747-756 VB denotes lly regul
T7753 733-747 RB denotes 53 differentia
T7752 726-733 -DQE- denotes . Δ133p
T7751 725-726 -RRB- denotes )
T7750 721-725 CD denotes 2005
T7749 719-720 -COMMA- denotes ,
T7748 716-719 FW denotes al.
T7747 713-715 FW denotes et
T7746 705-712 NNP denotes Bourdon
T7745 704-705 -LRB- denotes (
T7744 694-703 NN denotes apoptosis
R5391 T7760 T7759 arg2Of dent and -in,pen
R5392 T7761 T7757 arg2Of depende,ss
R5393 T7761 T7758 arg1Of depende,ion in p53-de
R5394 T7761 T7760 arg1Of depende,dent and -in
R5395 T7761 T7762 arg1Of depende,n
R5250 T7622 T7620 arg1Of nine,At
R5251 T7622 T7621 arg1Of nine,least
R5252 T7623 T7622 arg1Of isoforms,nine
R5253 T7623 T7624 arg1Of isoforms,of
R5254 T7623 T7626 arg1Of isoforms,have
R5255 T7623 T7627 arg1Of isoforms,been
R5256 T7623 T7628 arg2Of isoforms,identified
R5257 T7625 T7624 arg2Of p53,of
R5258 T7628 T7626 arg2Of identified,have
R5259 T7628 T7627 arg2Of identified,been
R5260 T7628 T7630 arg1Of identified,to
R5261 T7628 T7645 arg1Of identified,(
R5262 T7630 T7629 arg1Of to,due
R5263 T7633 T7631 arg1Of splicing,alternative
R5264 T7633 T7632 arg1Of splicing,mRNA
R5265 T7633 T7634 arg1Of splicing,","
R5266 T7634 T7639 arg1Of ",",and
R5267 T7637 T7634 arg2Of promoters,","
R5268 T7637 T7635 arg1Of promoters,multiple
R5269 T7637 T7636 arg1Of promoters,gene
R5270 T7639 T7630 arg2Of and,to
R5271 T7639 T7638 arg1Of and,","
R5272 T7642 T7639 arg2Of sites,and
R5273 T7642 T7640 arg1Of sites,alternative
R5274 T7642 T7641 arg1Of sites,initiation
R5275 T7642 T7643 arg1Of sites,of
R5276 T7644 T7643 arg2Of translation,of
R5277 T7646 T7645 arg2Of Ghosh,(
R5278 T7646 T7647 arg1Of Ghosh,et
R5279 T7646 T7648 arg1Of Ghosh,al.
R5280 T7646 T7649 arg1Of Ghosh,","
R5281 T7646 T7651 arg1Of Ghosh,;
R5282 T7646 T7657 arg1Of Ghosh,;
R5283 T7650 T7649 arg2Of 2004,","
R5284 T7652 T7653 arg1Of Ray,et
R5285 T7652 T7654 arg1Of Ray,al.
R5286 T7652 T7655 arg1Of Ray,","
R5287 T7655 T7651 arg2Of ",",;
R5288 T7656 T7655 arg2Of 2006,","
R5289 T7658 T7657 arg2Of Figure,;
R5290 T7658 T7659 arg1Of Figure,2
R5291 T7660 T7645 arg3Of ),(
R5292 T7662 T7661 arg2Of cancers,In
R5293 T7665 T7664 arg1Of expression,aberrant
R5294 T7665 T7666 arg1Of expression,of
R5295 T7665 T7669 arg1Of expression,occurs
R5296 T7668 T7666 arg2Of isoforms,of
R5297 T7668 T7667 arg1Of isoforms,p53
R5298 T7669 T7661 arg1Of occurs,In
R5299 T7669 T7663 arg1Of occurs,","
R5300 T7669 T7670 arg1Of occurs,frequently
R5301 T7669 T7671 arg1Of occurs,(
R5302 T7672 T7671 arg2Of Bourdon,(
R5303 T7672 T7673 arg1Of Bourdon,et
R5304 T7672 T7674 arg1Of Bourdon,al.
R5305 T7672 T7675 arg1Of Bourdon,","
R5306 T7672 T7677 arg1Of Bourdon,;
R5307 T7676 T7675 arg2Of 2005,","
R5308 T7678 T7677 arg2Of Bourdon,;
R5309 T7678 T7679 arg1Of Bourdon,","
R5310 T7680 T7679 arg2Of 2007,","
R5311 T7681 T7671 arg3Of ),(
R5312 T7683 T7682 arg1Of p53,Full-length
R5313 T7683 T7684 arg1Of p53,","
R5314 T7684 T7687 arg1Of ",",and
R5315 T7685 T7684 arg2Of Δ133p53,","
R5316 T7687 T7686 arg1Of and,","
R5317 T7687 T7689 arg1Of and,are
R5318 T7687 T7690 arg2Of and,localized
R5319 T7688 T7687 arg2Of p53β,and
R5320 T7690 T7689 arg2Of localized,are
R5321 T7690 T7692 arg1Of localized,in
R5322 T7690 T7696 arg1Of localized,and
R5323 T7692 T7691 arg1Of in,mainly
R5324 T7694 T7692 arg2Of nucleus,in
R5325 T7694 T7693 arg1Of nucleus,the
R5326 T7696 T7695 arg1Of and,","
R5327 T7696 T7720 arg1Of and,(
R5328 T7698 T7697 arg1Of few,only
R5329 T7698 T7699 arg1Of few,of
R5330 T7698 T7701 arg1Of few,are
R5331 T7698 T7702 arg1Of few,in
R5332 T7700 T7699 arg2Of them,of
R5333 T7701 T7705 arg1Of are,and
R5334 T7702 T7701 arg2Of in,are
R5335 T7704 T7702 arg2Of p53γ,in
R5336 T7704 T7703 arg1Of p53γ,cytoplasm.
R5337 T7705 T7696 arg2Of and,and
R5338 T7706 T7707 arg1Of Δ133p53β,are
R5339 T7706 T7708 arg2Of Δ133p53β,localized
R5340 T7708 T7707 arg2Of localized,are
R5341 T7708 T7709 arg1Of localized,in
R5342 T7708 T7712 arg1Of localized,and
R5343 T7711 T7709 arg2Of nucleus,in
R5344 T7711 T7710 arg1Of nucleus,the
R5345 T7712 T7705 arg2Of and,and
R5346 T7714 T7713 arg1Of Δ133p53γ,cytoplasm.
R5347 T7714 T7715 arg1Of Δ133p53γ,is
R5348 T7714 T7716 arg1Of Δ133p53γ,localized
R5349 T7715 T7712 arg2Of is,and
R5350 T7716 T7715 arg2Of localized,is
R5351 T7716 T7717 arg1Of localized,in
R5352 T7719 T7717 arg2Of cytoplasm,in
R5353 T7719 T7718 arg1Of cytoplasm,the
R5354 T7721 T7720 arg2Of Bourdon,(
R5355 T7721 T7722 arg1Of Bourdon,et
R5356 T7721 T7723 arg1Of Bourdon,al.
R5357 T7721 T7724 arg1Of Bourdon,","
R5358 T7725 T7724 arg2Of 2005,","
R5359 T7726 T7720 arg3Of ),(
R5360 T7727 T7728 arg1Of Co-transfection,of
R5361 T7727 T7732 arg1Of Co-transfection,increases
R5362 T7729 T7730 arg1Of p53,and
R5363 T7730 T7728 arg2Of and,of
R5364 T7731 T7730 arg2Of p53β,and
R5365 T7732 T7736 arg1Of increases,whereas
R5366 T7734 T7732 arg2Of apoptosis,increases
R5367 T7734 T7733 arg1Of apoptosis,p53-mediated
R5368 T7736 T7735 arg1Of whereas,","
R5369 T7737 T7738 arg1Of co-expression,of
R5370 T7737 T7740 arg1Of co-expression,with
R5371 T7737 T7742 arg1Of co-expression,suppresses
R5372 T7739 T7738 arg2Of p53,of
R5373 T7741 T7740 arg2Of Δ133p53,with
R5374 T7742 T7736 arg2Of suppresses,whereas
R5375 T7742 T7745 arg1Of suppresses,(
R5376 T7744 T7742 arg2Of apoptosis,suppresses
R5377 T7744 T7743 arg1Of apoptosis,p53-mediated
R5378 T7746 T7745 arg2Of Bourdon,(
R5379 T7746 T7747 arg1Of Bourdon,et
R5380 T7746 T7748 arg1Of Bourdon,al.
R5381 T7746 T7749 arg1Of Bourdon,","
R5382 T7750 T7749 arg2Of 2005,","
R5383 T7751 T7745 arg3Of ),(
R5384 T7752 T7754 arg1Of . Δ133p,lly regul
R5385 T7754 T7742 arg3Of lly regul,suppresses
R5386 T7754 T7753 arg1Of lly regul,53 differentia
R5387 T7756 T7754 arg2Of gene expre,lly regul
R5388 T7756 T7755 arg1Of gene expre,ates
R5389 T7756 T7757 arg1Of gene expre,ss
R5390 T7758 T7759 arg1Of ion in p53-de,pen
R5396 T7763 T7762 arg2Of t manne,n
R5397 T7763 T7764 arg1Of t manne,rs
R5398 T7763 T7765 arg1Of t manne,(Ao
R5399 T7763 T7766 arg1Of t manne,u
R5400 T7767 T7766 arg2Of bala,u
R5401 T7768 T7762 arg3Of e,n
R5402 T7769 T7770 arg1Of Co-expression,of
R5403 T7769 T7774 arg1Of Co-expression,with
R5404 T7769 T7776 arg1Of Co-expression,does
R5405 T7769 T7778 arg1Of Co-expression,affect
R5406 T7771 T7772 arg1Of Δ133p53β,or
R5407 T7772 T7770 arg2Of or,of
R5408 T7773 T7772 arg2Of Δ133p53γ,or
R5409 T7775 T7774 arg2Of p53,with
R5410 T7778 T7776 arg2Of affect,does
R5411 T7778 T7777 arg1Of affect,not
R5412 T7781 T7779 arg1Of activity,p53
R5413 T7781 T7780 arg1Of activity,transcriptional
R5414 T7781 T7782 arg1Of activity,on
R5415 T7781 T7790 arg1Of activity,as
R5416 T7783 T7784 arg1Of p21,and
R5417 T7785 T7784 arg2Of Bax,and
R5418 T7786 T7782 arg2Of promoters,on
R5419 T7786 T7783 arg1Of promoters,p21
R5420 T7786 T7785 arg1Of promoters,Bax
R5421 T7790 T7778 arg2Of as,affect
R5422 T7790 T7787 arg1Of as,","
R5423 T7790 T7788 arg1Of as,as
R5424 T7790 T7789 arg1Of as,well
R5425 T7791 T7790 arg2Of apoptosis,as

2_test

Id Subject Object Predicate Lexical cue
23459853-15340061-38778576 186-190 15340061 denotes 2004
23459853-16440000-38778577 204-208 16440000 denotes 2006
23459853-16131611-38778578 304-308 16131611 denotes 2005
23459853-17637683-38778579 319-323 17637683 denotes 2007
23459853-16131611-38778580 555-559 16131611 denotes 2005
23459853-16131611-38778581 721-725 16131611 denotes 2005
23459853-20689555-38778582 836-840 20689555 denotes 2011

GO-BP

Id Subject Object Predicate Lexical cue
T7592 910-925 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T7591 761-776 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T7590 972-981 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T7589 694-703 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T7588 617-626 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T7587 972-981 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T7586 694-703 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T7585 617-626 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T7584 459-483 http://purl.obolibrary.org/obo/GO_0051647 denotes localized in the nucleus
T7583 511-520 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T7582 459-468 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T7581 365-374 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T7580 159-170 http://purl.obolibrary.org/obo/GO_0006412 denotes translation
T7579 88-96 http://purl.obolibrary.org/obo/GO_0045292 denotes splicing
T7578 83-96 http://purl.obolibrary.org/obo/GO_0000398 denotes mRNA splicing
T7577 83-96 http://purl.obolibrary.org/obo/GO_0000394 denotes mRNA splicing
T7576 83-96 http://purl.obolibrary.org/obo/GO_0000374 denotes mRNA splicing
T7575 83-96 http://purl.obolibrary.org/obo/GO_0000373 denotes mRNA splicing
T7574 83-96 http://purl.obolibrary.org/obo/GO_0000372 denotes mRNA splicing

GO-CC

Id Subject Object Predicate Lexical cue
T7597 528-537 http://purl.obolibrary.org/obo/GO_0005737 denotes cytoplasm
T7596 488-497 http://purl.obolibrary.org/obo/GO_0005737 denotes cytoplasm
T7595 426-435 http://purl.obolibrary.org/obo/GO_0005737 denotes cytoplasm
T7594 476-483 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus
T7593 389-396 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

sentences

Id Subject Object Predicate Lexical cue
T7495 843-982 Sentence denotes Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional activity on p21 and Bax promoters, as well as apoptosis.
T7494 562-842 Sentence denotes Co-transfection of p53 and p53β increases p53-mediated apoptosis, whereas co-expression of p53 with Δ133p53 suppresses p53-mediated apoptosis (Bourdon et al., 2005). Δ133p53 differentially regulates gene expression in p53-dependent and -independent manners (Aoubala et al., 2011).
T7493 326-561 Sentence denotes Full-length p53, Δ133p53, and p53β are localized mainly in the nucleus, and only few of them are in cytoplasm. p53γ and Δ133p53β are localized in the nucleus and cytoplasm. Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005).
T7492 221-325 Sentence denotes In cancers, aberrant expression of p53 isoforms occurs frequently (Bourdon et al., 2005; Bourdon, 2007).
T7491 13-220 Sentence denotes At least nine isoforms of p53 have been identified due to alternative mRNA splicing, multiple gene promoters, and alternative initiation sites of translation (Ghosh et al., 2004; Ray et al., 2006; Figure 2).
T103 0-12 Sentence denotes p53 Isoforms
T104 13-220 Sentence denotes At least nine isoforms of p53 have been identified due to alternative mRNA splicing, multiple gene promoters, and alternative initiation sites of translation (Ghosh et al., 2004; Ray et al., 2006; Figure 2).
T105 221-325 Sentence denotes In cancers, aberrant expression of p53 isoforms occurs frequently (Bourdon et al., 2005; Bourdon, 2007).
T106 326-561 Sentence denotes Full-length p53, Δ133p53, and p53β are localized mainly in the nucleus, and only few of them are in cytoplasm. p53γ and Δ133p53β are localized in the nucleus and cytoplasm. Δ133p53γ is localized in the cytoplasm (Bourdon et al., 2005).
T107 562-842 Sentence denotes Co-transfection of p53 and p53β increases p53-mediated apoptosis, whereas co-expression of p53 with Δ133p53 suppresses p53-mediated apoptosis (Bourdon et al., 2005). Δ133p53 differentially regulates gene expression in p53-dependent and -independent manners (Aoubala et al., 2011).
T108 843-982 Sentence denotes Co-expression of Δ133p53β or Δ133p53γ with p53 does not affect p53 transcriptional activity on p21 and Bax promoters, as well as apoptosis.

simple1

Id Subject Object Predicate Lexical cue
T7619 946-949 Protein denotes Bax
T7618 938-941 Protein denotes p21
T7617 906-909 Protein denotes p53
T7616 886-889 Protein denotes p53
T7615 872-880 Protein denotes Δ133p53γ
T7614 860-868 Protein denotes Δ133p53β
T7613 780-783 Protein denotes p53
T7612 728-735 Protein denotes Δ133p53
T7611 681-684 Protein denotes p53
T7610 662-669 Protein denotes Δ133p53
T7609 653-656 Protein denotes p53
T7608 604-607 Protein denotes p53
T7607 589-593 Protein denotes p53β
T7606 581-584 Protein denotes p53
T7605 499-507 Protein denotes Δ133p53γ
T7604 446-454 Protein denotes Δ133p53β
T7603 437-441 Protein denotes p53γ
T7602 356-360 Protein denotes p53β
T7601 343-350 Protein denotes Δ133p53
T7600 338-341 Protein denotes p53
T7599 256-259 Protein denotes p53
T7598 39-42 Protein denotes p53