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PMC:3586680 / 13153-13292 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T6765 121-124 Protein denotes FAS
T6764 109-115 Protein denotes SCOTIN
T6763 103-107 Protein denotes PUMA
T6762 98-101 Protein denotes BAX
T6761 30-33 Protein denotes p53
T6760 23-28 Protein denotes miR34
T6759 6-9 Protein denotes p21
T6748 121-124 Protein denotes FAS
T6747 109-115 Protein denotes SCOTIN
T6746 103-107 Protein denotes PUMA
T6745 98-101 Protein denotes BAX
T6744 30-33 Protein denotes p53
T6743 23-28 Protein denotes miR34
T6742 6-9 Protein denotes p21

testone

Id Subject Object Predicate Lexical cue
T6729 121-124 Protein denotes FAS
T6728 109-115 Protein denotes SCOTIN
T6727 103-107 Protein denotes PUMA
T6726 98-101 Protein denotes BAX
T6725 30-33 Protein denotes p53
T6724 23-28 Protein denotes miR34
T6723 6-9 Protein denotes p21

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7134 121-124 Protein denotes FAS
T7133 14-33 Protein denotes microRNA miR34. p53
T7132 6-9 Protein denotes p21

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7231 126-129 CC denotes and
T7230 124-125 , denotes ,
T7229 121-124 NNP denotes FAS
T7228 117-120 CC denotes and
T7227 115-116 , denotes ,
T7226 109-115 NNP denotes SCOTIN
T7225 107-108 , denotes ,
T7224 103-107 NNP denotes PUMA
T7223 101-102 , denotes ,
T7222 98-101 NNP denotes BAX
T7221 95-97 IN denotes as
T7220 90-94 JJ denotes such
T7219 84-89 NNS denotes genes
T7218 71-83 JJ denotes proapoptotic
T7217 55-70 VBG denotes transactivating
T7216 52-54 IN denotes by
T7215 42-51 NN denotes apoptosis
T7214 34-41 VBZ denotes induces
T7213 30-33 NN denotes p53
T7212 28-29 . denotes .
T7211 23-28 NNP denotes miR34
T7210 14-22 NNP denotes microRNA
T7209 11-13 CC denotes or
T7208 9-10 , denotes ,
T7207 6-9 CD denotes p21
R5058 T7208 T7207 punct ",",p21
R5060 T7210 T7211 compound microRNA,miR34
R5063 T7213 T7214 nsubj p53,induces
R5064 T7214 T7214 ROOT induces,induces
R5065 T7215 T7214 dobj apoptosis,induces
R5066 T7216 T7214 prep by,induces
R5067 T7217 T7216 pcomp transactivating,by
R5068 T7218 T7219 amod proapoptotic,genes
R5069 T7219 T7217 dobj genes,transactivating
R5070 T7220 T7221 amod such,as
R5071 T7221 T7219 prep as,genes
R5072 T7222 T7221 pobj BAX,as
R5073 T7223 T7222 punct ",",BAX
R5074 T7224 T7222 conj PUMA,BAX
R5075 T7225 T7224 punct ",",PUMA
R5076 T7226 T7224 conj SCOTIN,PUMA
R5077 T7227 T7226 punct ",",SCOTIN
R5078 T7228 T7226 cc and,SCOTIN
R5079 T7229 T7226 conj FAS,SCOTIN
R5080 T7230 T7229 punct ",",FAS
R5081 T7231 T7217 cc and,transactivating

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7372 55-125 Positive_regulation denotes transactivating proapoptotic genes such as BAX, PUMA, SCOTIN, and FAS,
T7363 30-33 Protein denotes p53
T7362 109-115 Protein denotes SCOTIN
T7359 23-28 Protein denotes miR34
T7357 121-124 Protein denotes FAS
T7355 71-97 Protein denotes proapoptotic genes such as
T7353 103-107 Protein denotes PUMA
T7350 71-125 Protein denotes proapoptotic genes such as BAX, PUMA, SCOTIN, and FAS,
R5189 T7350 T7372 themeOf "proapoptotic genes such as BAX, PUMA, SCOTIN, and FAS,","transactivating proapoptotic genes such as BAX, PUMA, SCOTIN, and FAS,"

DLUT931

Id Subject Object Predicate Lexical cue
T7080 109-115 Protein denotes SCOTIN
T7079 103-107 Protein denotes PUMA
T7078 98-101 Protein denotes BAX
T7077 30-33 Protein denotes p53
T7076 23-28 Protein denotes miR34
T7075 6-9 Protein denotes p21
T7072 121-124 Protein denotes FAS

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T7117 109-115 Protein denotes SCOTIN
T7116 103-107 Protein denotes PUMA
T7115 98-101 Protein denotes BAX
T7114 30-33 Protein denotes p53
T7113 23-28 Protein denotes miR34
T7112 6-9 Protein denotes p21
T7109 121-124 Protein denotes FAS

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7060 55-70 Binding denotes transactivating
T7053 109-115 Protein denotes SCOTIN
T7052 103-107 Protein denotes PUMA
T7051 98-101 Protein denotes BAX
T7050 30-33 Protein denotes p53
T7049 23-28 Protein denotes miR34
T7048 6-9 Protein denotes p21
T7045 121-124 Protein denotes FAS
R4958 T7051 T7060 themeOf BAX,transactivating
R4960 T7053 T7060 themeOf SCOTIN,transactivating
R4956 T7045 T7060 themeOf FAS,transactivating
R4959 T7052 T7060 themeOf PUMA,transactivating

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7067 30-33 http://www.uniprot.org/uniprot/P04637 denotes p53

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T6815 121-124 Protein denotes FAS
T6814 109-115 Protein denotes SCOTIN
T6813 103-107 Protein denotes PUMA
T6812 98-101 Protein denotes BAX
T6811 30-33 Protein denotes p53
T6810 23-28 Protein denotes miR34
T6809 6-9 Protein denotes p21

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6935 82-88 NN denotes c gene
T6934 81-82 -COMMA- denotes i
T6933 77-81 NN denotes ptot
T6932 76-77 -COMMA- denotes o
T6931 73-76 NN denotes oap
T6930 71-73 IN denotes pr
T6929 66-70 JJ denotes ting
T6928 61-66 NN denotes ctiva
T6927 49-61 JJ denotes is by transa
T6926 34-49 VB denotes induces apoptos
T6925 32-34 IN denotes 3
T6924 23-32 NN denotes miR34. p5
T6923 15-22 VB denotes icroRNA
T6922 12-15 NN denotes r m
T6921 6-12 NN denotes p21, o
T6946 136-137 -LRB- denotes t
T6945 131-136 NN denotes nhibi
T6944 127-131 NN denotes nd i
T6943 114-127 JJ denotes N, and FAS, a
T6942 111-114 DT denotes OTI
T6941 101-111 VB denotes , PUMA, SC
T6940 98-101 CC denotes BAX
T6939 96-97 -COMMA- denotes s
T6938 93-96 NN denotes h a
T6937 90-93 CC denotes suc
T6936 88-89 -COMMA- denotes s
R4854 T6922 T6921 arg1Of r m,"p21, o"
R4855 T6922 T6923 arg1Of r m,icroRNA
R4856 T6922 T6926 arg1Of r m,induces apoptos
R4857 T6922 T6941 arg1Of r m,", PUMA, SC"
R4858 T6923 T6925 arg1Of icroRNA,3
R4859 T6924 T6923 arg2Of miR34. p5,icroRNA
R4860 T6926 T6940 arg1Of induces apoptos,BAX
R4861 T6928 T6926 arg2Of ctiva,induces apoptos
R4862 T6928 T6927 arg1Of ctiva,is by transa
R4863 T6928 T6930 arg1Of ctiva,pr
R4864 T6930 T6929 arg1Of pr,ting
R4865 T6931 T6932 arg1Of oap,o
R4866 T6932 T6934 arg1Of o,i
R4867 T6933 T6932 arg2Of ptot,o
R4868 T6934 T6937 arg1Of i,suc
R4869 T6935 T6934 arg2Of c gene,i
R4870 T6937 T6930 arg2Of suc,pr
R4871 T6937 T6936 arg1Of suc,s
R4872 T6938 T6937 arg2Of h a,suc
R4873 T6940 T6925 arg2Of BAX,3
R4874 T6940 T6939 arg1Of BAX,s
R4875 T6941 T6940 arg2Of ", PUMA, SC",BAX
R4876 T6945 T6941 arg2Of nhibi,", PUMA, SC"
R4877 T6945 T6942 arg1Of nhibi,OTI
R4878 T6945 T6943 arg1Of nhibi,"N, and FAS, a"
R4879 T6945 T6944 arg1Of nhibi,nd i

GO-BP

Id Subject Object Predicate Lexical cue
T6825 42-51 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T6823 42-51 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis

simple1

Id Subject Object Predicate Lexical cue
T6860 121-124 Protein denotes FAS
T6859 109-115 Protein denotes SCOTIN
T6858 103-107 Protein denotes PUMA
T6857 98-101 Protein denotes BAX
T6856 30-33 Protein denotes p53
T6855 23-28 Protein denotes miR34
T6854 6-9 Protein denotes p21