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PMC:3586680 / 12631-12920 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T6755 253-256 Protein denotes p53
T6739 253-256 Protein denotes p53
T3813 43-49 Protein denotes Hyal-2
T3812 37-42 Binding denotes binds
T3811 7-36 Protein denotes Transforming growth factor β1
T3739 43-49 Protein denotes Hyal-2
T3738 7-36 Protein denotes Transforming growth factor β1
R2662 T3811 T3812 themeOf Transforming growth factor β1,binds
R2663 T3813 T3812 themeOf Hyal-2,binds

testone

Id Subject Object Predicate Lexical cue
T6720 253-256 Protein denotes p53
T3684 148-155 Entity denotes nucleus
T3683 37-42 Binding denotes binds
T3666 43-49 Protein denotes Hyal-2
T3665 7-36 Protein denotes Transforming growth factor β1
R2625 T3665 T3683 themeOf Transforming growth factor β1,binds
R2626 T3666 T3683 themeOf Hyal-2,binds

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7128 243-252 Positive_regulation denotes Activated
T7127 253-256 Protein denotes p53
T5511 160-169 Positive_regulation denotes enhancing
T5510 37-42 Binding denotes binds
T5509 174-194 Protein denotes SMAD-driven promoter
T5508 115-120 Protein denotes Smad4
T5507 108-114 Protein denotes Hyal-2
T5506 103-107 Protein denotes WWOX
T5505 7-36 Protein denotes Transforming growth factor β1
R3826 T5505 T5510 themeOf Transforming growth factor β1,binds
R3829 T5509 T5511 themeOf SMAD-driven promoter,enhancing
R4987 T7127 T7128 themeOf p53,Activated

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7161 282-287 NN denotes cycle
T7160 277-281 NN denotes cell
T7159 275-276 , denotes ,
T7158 266-275 NN denotes apoptosis
T7157 257-265 NNS denotes mediates
T7156 253-256 NN denotes p53
T7155 243-252 VBN denotes Activated
T6644 212-215 FW denotes al.
T6643 209-211 FW denotes et
T6642 205-208 NNP denotes Hsu
T6641 204-205 -LRB- denotes (
T6640 195-203 NN denotes activity
T6639 186-194 NN denotes promoter
T6638 174-185 JJ denotes SMAD-driven
T6637 170-173 DT denotes the
T6636 160-169 VBG denotes enhancing
T6635 156-159 IN denotes for
T6634 148-155 NN denotes nucleus
T6633 144-147 DT denotes the
T6632 141-143 TO denotes to
T6631 132-140 VB denotes relocate
T6630 129-131 TO denotes to
T6629 121-128 NN denotes complex
T6628 115-120 NNP denotes Smad4
T6627 114-115 CD denotes /
T6626 112-114 CD denotes -2
T6625 103-112 NNP denotes WWOX/Hyal
T6624 99-102 DT denotes the
T6623 96-98 IN denotes of
T6622 86-95 NN denotes formation
T6621 82-85 DT denotes the
T6620 75-81 VB denotes signal
T6619 72-74 TO denotes to
T6618 63-71 NN denotes receptor
T6617 55-62 NN denotes cognate
T6616 53-54 DT denotes a
T6615 50-52 IN denotes as
T6614 43-49 JJ denotes Hyal-2
T6613 37-42 NNS denotes binds
T6612 34-36 CD denotes β1
T6611 27-33 NN denotes factor
T6610 20-26 NN denotes growth
T6609 7-19 VBG denotes Transforming
T6608 5-6 . denotes .
T6607 4-5 -RRB- denotes )
T6606 0-4 CD denotes 2006
T6648 222-223 . denotes .
T6647 221-222 -RRB- denotes )
T6646 217-221 CD denotes 2009
T6645 215-216 , denotes ,
R4687 T6611 T6609 dobj factor,Transforming
R4692 T6612 T6613 nummod β1,binds
R4696 T6613 T6609 nsubj binds,Transforming
R4700 T6614 T6613 dobj Hyal-2,binds
R4705 T6615 T6614 prep as,Hyal-2
R4707 T6616 T6618 det a,receptor
R4709 T6617 T6618 compound cognate,receptor
R4710 T6618 T6615 pobj receptor,as
R4713 T6619 T6620 aux to,signal
R4716 T6620 T6613 advcl signal,binds
R4720 T6621 T6622 det the,formation
R4723 T6622 T6620 dobj formation,signal
R4730 T6623 T6622 prep of,formation
R4733 T6624 T6629 det the,complex
R4737 T6625 T6628 compound WWOX/Hyal,Smad4
R4741 T6626 T6627 compound -2,/
R4745 T6627 T6628 compound /,Smad4
R4748 T6609 T6609 ROOT Transforming,Transforming
R4749 T6628 T6629 compound Smad4,complex
R4750 T6610 T6611 compound growth,factor
R4751 T6629 T6623 pobj complex,of
R4752 T6630 T6631 aux to,relocate
R4753 T6631 T6620 xcomp relocate,signal
R4754 T6632 T6631 prep to,relocate
R4755 T6633 T6634 det the,nucleus
R4756 T6634 T6632 pobj nucleus,to
R4757 T6635 T6634 prep for,nucleus
R4758 T6636 T6635 pcomp enhancing,for
R4759 T6637 T6640 det the,activity
R4760 T6638 T6640 amod SMAD-driven,activity
R4761 T6639 T6640 compound promoter,activity
R4762 T6640 T6636 dobj activity,enhancing
R4763 T6641 T6644 punct (,al.
R4764 T6642 T6644 compound Hsu,al.
R4765 T6643 T6644 nmod et,al.
R4766 T6644 T6613 dep al.,binds
R4767 T6645 T6644 punct ",",al.
R4768 T6646 T6644 npadvmod 2009,al.
R4769 T6647 T6644 punct ),al.
R4770 T6648 T6609 punct .,Transforming
R5005 T7155 T7158 amod Activated,apoptosis
R5006 T7156 T7158 nmod p53,apoptosis
R5007 T7157 T7158 compound mediates,apoptosis
R5008 T7158 T7158 ROOT apoptosis,apoptosis
R5010 T7160 T7161 compound cell,cycle

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7373 243-256 Positive_regulation denotes Activated p53
T7354 243-256 Protein denotes Activated p53
T5769 82-203 Gene_expression denotes the formation of the WWOX/Hyal-2/Smad4 complex to relocate to the nucleus for enhancing the SMAD-driven promoter activity
T5757 7-54 Binding denotes Transforming growth factor β1 binds Hyal-2 as a
T5745 160-203 Positive_regulation denotes enhancing the SMAD-driven promoter activity
T5719 7-36 Protein denotes Transforming growth factor β1
T5714 144-155 Entity denotes the nucleus
T5695 43-49 Protein denotes Hyal-2
T5684 103-120 Protein denotes WWOX/Hyal-2/Smad4
T5644 103-120 Protein denotes WWOX/Hyal-2/Smad4
T5639 55-71 Protein denotes cognate receptor
T5659 186-194 Entity denotes promoter
T5652 103-107 Protein denotes WWOX
T5648 108-114 Protein denotes Hyal-2
R3873 T5684 T5769 themeOf WWOX/Hyal-2/Smad4,the formation of the WWOX/Hyal-2/Smad4 complex to relocate to the nucleus for enhancing the SMAD-driven promoter activity
R3881 T5695 T5757 themeOf Hyal-2,Transforming growth factor β1 binds Hyal-2 as a
R3889 T5719 T5757 themeOf Transforming growth factor β1,Transforming growth factor β1 binds Hyal-2 as a
R5190 T7354 T7373 themeOf Activated p53,Activated p53

DLUT931

Id Subject Object Predicate Lexical cue
T7086 243-252 Positive_regulation denotes Activated
T7070 253-256 Protein denotes p53
T5252 37-42 Binding denotes binds
T5222 43-49 Protein denotes Hyal-2
T5221 7-36 Protein denotes Transforming growth factor β1
R3687 T5221 T5252 themeOf Transforming growth factor β1,binds
R3688 T5222 T5252 themeOf Hyal-2,binds
R4967 T7070 T7086 themeOf p53,Activated

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T7123 243-252 Positive_regulation denotes Activated
T7107 253-256 Protein denotes p53
T5410 37-42 Binding denotes binds
T5373 43-49 Protein denotes Hyal-2
T5372 7-36 Protein denotes Transforming growth factor β1
R3762 T5372 T5410 themeOf Transforming growth factor β1,binds
R3763 T5373 T5410 themeOf Hyal-2,binds
R4978 T7107 T7123 themeOf p53,Activated

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7059 243-252 Positive_regulation denotes Activated
T7043 253-256 Protein denotes p53
T5133 37-42 Binding denotes binds
T5100 43-49 Protein denotes Hyal-2
T5099 7-36 Protein denotes Transforming growth factor β1
R3626 T5099 T5133 themeOf Transforming growth factor β1,binds
R3627 T5100 T5133 themeOf Hyal-2,binds
R4955 T7043 T7059 themeOf p53,Activated

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7064 253-256 http://www.uniprot.org/uniprot/P04637 denotes p53

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4023 43-49 Protein denotes Hyal-2
T6806 253-256 Protein denotes p53
T4022 7-36 Protein denotes Transforming growth factor β1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6873 282-287 NN denotes cycle
T6872 277-281 NN denotes cell
T6871 275-276 -COMMA- denotes ,
T6870 266-275 NN denotes apoptosis
T6869 257-265 VB denotes mediates
T6868 253-256 NN denotes p53
T4990 221-222 -RRB- denotes )
T4989 217-221 CD denotes 2009
T4988 215-216 -COMMA- denotes ,
T4987 212-215 FW denotes al.
T4986 209-211 FW denotes et
T4985 205-208 NNP denotes Hsu
T4984 204-205 -LRB- denotes (
T4983 195-203 NN denotes activity
T4982 186-194 NN denotes promoter
T4981 174-185 JJ denotes SMAD-driven
T4980 170-173 DT denotes the
T4979 160-169 VB denotes enhancing
T4978 156-159 IN denotes for
T4977 148-155 NN denotes nucleus
T4976 144-147 DT denotes the
T4975 141-143 TO denotes to
T4974 132-140 VB denotes relocate
T4973 129-131 TO denotes to
T4972 121-128 NN denotes complex
T4971 103-120 JJ denotes WWOX/Hyal-2/Smad4
T4970 99-102 DT denotes the
T4969 96-98 IN denotes of
T4968 86-95 NN denotes formation
T4967 82-85 DT denotes the
T4966 75-81 VB denotes signal
T4965 72-74 TO denotes to
T4964 63-71 NN denotes receptor
T4963 55-62 JJ denotes cognate
T4962 53-54 DT denotes a
T4961 50-52 IN denotes as
T4960 43-49 NN denotes Hyal-2
T4959 37-42 VB denotes binds
T4958 34-36 NN denotes β1
T4957 27-33 NN denotes factor
T4956 20-26 NN denotes growth
T4955 7-19 VB denotes Transforming
T4954 4-5 -RRB- denotes )
T4953 0-4 CD denotes 2006
T6867 243-252 VB denotes Activated
R3583 T4983 T4982 arg1Of activity,promoter
R3555 T4958 T4955 arg1Of β1,Transforming
R3556 T4958 T4956 arg1Of β1,growth
R3557 T4958 T4957 arg1Of β1,factor
R3558 T4958 T4959 arg1Of β1,binds
R3559 T4959 T4961 arg1Of binds,as
R3560 T4960 T4959 arg2Of Hyal-2,binds
R3561 T4964 T4961 arg2Of receptor,as
R3562 T4964 T4962 arg1Of receptor,a
R3563 T4964 T4963 arg1Of receptor,cognate
R3564 T4964 T4965 modOf receptor,to
R3565 T4966 T4965 arg1Of signal,to
R3566 T4968 T4966 arg2Of formation,signal
R3567 T4968 T4967 arg1Of formation,the
R3568 T4968 T4969 arg1Of formation,of
R3569 T4968 T4973 modOf formation,to
R3570 T4972 T4969 arg2Of complex,of
R3571 T4972 T4970 arg1Of complex,the
R3572 T4972 T4971 arg1Of complex,WWOX/Hyal-2/Smad4
R3573 T4974 T4973 arg1Of relocate,to
R3574 T4974 T4975 arg1Of relocate,to
R3575 T4977 T4975 arg2Of nucleus,to
R3576 T4977 T4976 arg1Of nucleus,the
R3577 T4977 T4978 arg1Of nucleus,for
R3578 T4979 T4978 arg2Of enhancing,for
R3579 T4979 T4984 arg1Of enhancing,(
R3580 T4983 T4979 arg2Of activity,enhancing
R3581 T4983 T4980 arg1Of activity,the
R3582 T4983 T4981 arg1Of activity,SMAD-driven
R3584 T4985 T4984 arg2Of Hsu,(
R3585 T4985 T4986 arg1Of Hsu,et
R3586 T4985 T4987 arg1Of Hsu,al.
R3587 T4985 T4988 arg1Of Hsu,","
R3588 T4989 T4988 arg2Of 2009,","
R3589 T4990 T4984 arg3Of ),(
R4805 T6868 T6867 arg2Of p53,Activated
R4806 T6868 T6869 arg1Of p53,mediates
R4807 T6870 T6871 arg1Of apoptosis,","

2_test

Id Subject Object Predicate Lexical cue
23459853-16438931-38778569 0-4 16438931 denotes 2006
23459853-19366691-38778570 217-221 19366691 denotes 2009

UBERON-AE

Id Subject Object Predicate Lexical cue
T3822 108-112 http://purl.obolibrary.org/obo/UBERON_3000101 denotes Hyal
T3821 43-47 http://purl.obolibrary.org/obo/UBERON_3000101 denotes Hyal

GO-BP

Id Subject Object Predicate Lexical cue
T6826 277-287 http://purl.obolibrary.org/obo/GO_0007049 denotes cell cycle
T6824 266-275 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T6822 266-275 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T4039 20-26 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T4065 86-95 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T4050 75-81 http://purl.obolibrary.org/obo/GO_0023052 denotes signal

GO-CC

Id Subject Object Predicate Lexical cue
T6846 277-281 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T4091 148-155 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

sentences

Id Subject Object Predicate Lexical cue
T3848 7-223 Sentence denotes Transforming growth factor β1 binds Hyal-2 as a cognate receptor to signal the formation of the WWOX/Hyal-2/Smad4 complex to relocate to the nucleus for enhancing the SMAD-driven promoter activity (Hsu et al., 2009).
T89 7-223 Sentence denotes Transforming growth factor β1 binds Hyal-2 as a cognate receptor to signal the formation of the WWOX/Hyal-2/Smad4 complex to relocate to the nucleus for enhancing the SMAD-driven promoter activity (Hsu et al., 2009).
T90 225-242 Sentence denotes p53 and Functions

simple1

Id Subject Object Predicate Lexical cue
T6851 253-256 Protein denotes p53
T4146 43-49 Protein denotes Hyal-2
T4145 7-36 Protein denotes Transforming growth factor β1