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PMC:3586680 / 11532-11801 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T3797 118-133 Phosphorylation denotes phosphorylation
T3796 103-107 Protein denotes WWOX
T3728 103-107 Protein denotes WWOX
R2660 T3796 T3797 themeOf WWOX,phosphorylation

testone

Id Subject Object Predicate Lexical cue
T3655 103-107 Protein denotes WWOX

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6456 268-269 . denotes .
T6455 267-268 -RRB- denotes )
T6454 263-267 CD denotes 2010
T6453 261-262 , denotes ,
T6452 257-261 CD denotes 2007
T6451 255-256 , denotes ,
T6450 252-255 FW denotes al.
T6449 249-251 FW denotes et
T6448 243-248 NNP denotes Chang
T6447 242-243 -LRB- denotes (
T6446 232-241 NN denotes apoptosis
T6445 223-231 VBG denotes inducing
T6444 219-222 IN denotes for
T6443 212-218 NN denotes nuclei
T6442 209-211 CC denotes or
T6441 196-208 NN denotes mitochondria
T6440 193-195 TO denotes to
T6439 182-192 VBG denotes relocating
T6438 179-181 IN denotes by
T6437 170-178 VBN denotes followed
T6436 168-169 , denotes ,
T6435 163-168 NNS denotes sites
T6434 156-162 NNS denotes others
T6433 147-155 RB denotes probably
T6432 143-146 CC denotes and
T6431 137-142 NNP denotes Tyr33
T6430 134-136 IN denotes in
T6429 118-133 NN denotes phosphorylation
T6426 101-102 , denotes ,
T6425 96-101 NNS denotes drugs
T6424 79-95 JJ denotes chemotherapeutic
T6423 75-78 CC denotes and
T6422 63-74 NN denotes irradiation
T6421 60-62 NNP denotes UV
T6420 57-59 IN denotes as
T6419 52-56 JJ denotes such
T6418 50-51 , denotes ,
T6417 44-50 NN denotes stress
T6416 30-43 JJ denotes environmental
T6415 27-29 CC denotes or
T6414 17-26 NNS denotes chemicals
T6413 14-16 TO denotes to
T6412 5-13 NN denotes exposure
T6411 0-4 IN denotes Upon
T6428 108-117 VBZ denotes undergoes
T6427 103-107 NNP denotes WWOX
R4479 T6417 T6414 conj stress,chemicals
R4481 T6418 T6417 punct ",",stress
R4482 T6419 T6420 amod such,as
R4485 T6420 T6414 prep as,chemicals
R4487 T6421 T6422 compound UV,irradiation
R4489 T6422 T6420 pobj irradiation,as
R4490 T6423 T6422 cc and,irradiation
R4491 T6424 T6425 amod chemotherapeutic,drugs
R4493 T6425 T6422 conj drugs,irradiation
R4494 T6426 T6428 punct ",",undergoes
R4496 T6427 T6428 nsubj WWOX,undergoes
R4497 T6428 T6428 ROOT undergoes,undergoes
R4498 T6429 T6428 dobj phosphorylation,undergoes
R4500 T6430 T6428 prep in,undergoes
R4502 T6431 T6430 pobj Tyr33,in
R4503 T6432 T6431 cc and,Tyr33
R4504 T6433 T6434 advmod probably,others
R4506 T6434 T6431 conj others,Tyr33
R4507 T6435 T6430 pobj sites,in
R4508 T6436 T6435 punct ",",sites
R4510 T6437 T6435 acl followed,sites
R4511 T6438 T6437 agent by,followed
R4512 T6439 T6438 pcomp relocating,by
R4513 T6440 T6439 prep to,relocating
R4515 T6441 T6440 pobj mitochondria,to
R4516 T6442 T6441 cc or,mitochondria
R4518 T6443 T6441 conj nuclei,mitochondria
R4519 T6444 T6439 prep for,relocating
R4520 T6445 T6444 pcomp inducing,for
R4522 T6446 T6445 dobj apoptosis,inducing
R4523 T6447 T6450 punct (,al.
R4524 T6448 T6450 compound Chang,al.
R4525 T6449 T6450 nmod et,al.
R4526 T6450 T6450 ROOT al.,al.
R4527 T6451 T6450 punct ",",al.
R4529 T6452 T6450 npadvmod 2007,al.
R4530 T6453 T6452 punct ",",2007
R4531 T6454 T6452 conj 2010,2007
R4532 T6455 T6450 punct ),al.
R4534 T6456 T6450 punct .,al.
R4664 T6411 T6428 prep Upon,undergoes
R4668 T6412 T6411 pobj exposure,Upon
R4671 T6413 T6412 prep to,exposure
R4674 T6414 T6413 pobj chemicals,to
R4680 T6415 T6414 cc or,chemicals
R4683 T6416 T6417 amod environmental,stress

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T5740 103-107 Protein denotes WWOX
T5721 156-169 Entity denotes others sites,
T5640 17-26 Entity denotes chemicals
T5636 79-102 Entity denotes chemotherapeutic drugs,
T5617 196-208 Entity denotes mitochondria
T5615 137-142 Entity denotes Tyr33
T5667 212-218 Entity denotes nuclei

DLUT931

Id Subject Object Predicate Lexical cue
T5242 118-133 Phosphorylation denotes phosphorylation
T5211 103-107 Protein denotes WWOX
R3670 T5211 T5242 themeOf WWOX,phosphorylation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T5397 118-133 Phosphorylation denotes phosphorylation
T5362 103-107 Protein denotes WWOX
R3750 T5362 T5397 themeOf WWOX,phosphorylation

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T5089 103-107 Protein denotes WWOX

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5155 103-107 http://www.uniprot.org/uniprot/Q9NZC7 denotes WWOX

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4012 103-107 Protein denotes WWOX

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4808 267-268 -RRB- denotes )
T4807 263-267 CD denotes 2010
T4806 261-262 -COMMA- denotes ,
T4805 257-261 CD denotes 2007
T4804 255-256 -COMMA- denotes ,
T4803 252-255 FW denotes al.
T4802 249-251 FW denotes et
T4801 243-248 NNP denotes Chang
T4800 242-243 -LRB- denotes (
T4799 232-241 NN denotes apoptosis
T4798 223-231 VB denotes inducing
T4797 219-222 IN denotes for
T4796 212-218 NN denotes nuclei
T4795 209-211 CC denotes or
T4794 196-208 NN denotes mitochondria
T4793 193-195 TO denotes to
T4792 182-192 VB denotes relocating
T4791 179-181 IN denotes by
T4790 170-178 VB denotes followed
T4789 168-169 -COMMA- denotes ,
T4788 163-168 NN denotes sites
T4787 156-162 NN denotes others
T4786 147-155 RB denotes probably
T4785 143-146 CC denotes and
T4784 137-142 NN denotes Tyr33
T4783 134-136 IN denotes in
T4782 118-133 NN denotes phosphorylation
T4781 108-117 VB denotes undergoes
T4780 103-107 NN denotes WWOX
T4779 101-102 -COMMA- denotes ,
T4778 96-101 NN denotes drugs
T4777 79-95 JJ denotes chemotherapeutic
T4776 75-78 CC denotes and
T4775 63-74 NN denotes irradiation
T4774 60-62 NN denotes UV
T4773 57-59 IN denotes as
T4772 52-56 JJ denotes such
T4771 50-51 -COMMA- denotes ,
T4770 44-50 NN denotes stress
T4769 30-43 JJ denotes environmental
T4768 27-29 CC denotes or
T4767 17-26 NN denotes chemicals
T4766 14-16 TO denotes to
T4765 5-13 NN denotes exposure
T4764 0-4 IN denotes Upon
R3366 T4765 T4764 arg2Of exposure,Upon
R3367 T4765 T4766 arg1Of exposure,to
R3368 T4765 T4771 arg1Of exposure,","
R3369 T4765 T4773 arg1Of exposure,as
R3370 T4767 T4768 arg1Of chemicals,or
R3371 T4768 T4766 arg2Of or,to
R3372 T4770 T4768 arg2Of stress,or
R3373 T4770 T4769 arg1Of stress,environmental
R3374 T4773 T4772 arg1Of as,such
R3375 T4775 T4774 arg1Of irradiation,UV
R3376 T4775 T4776 arg1Of irradiation,and
R3377 T4776 T4773 arg2Of and,as
R3378 T4778 T4776 arg2Of drugs,and
R3379 T4778 T4777 arg1Of drugs,chemotherapeutic
R3380 T4780 T4781 arg1Of WWOX,undergoes
R3381 T4781 T4764 arg1Of undergoes,Upon
R3382 T4781 T4779 arg1Of undergoes,","
R3383 T4781 T4783 arg1Of undergoes,in
R3384 T4781 T4789 arg1Of undergoes,","
R3385 T4781 T4790 modOf undergoes,followed
R3386 T4782 T4781 arg2Of phosphorylation,undergoes
R3387 T4784 T4785 arg1Of Tyr33,and
R3388 T4785 T4783 arg2Of and,in
R3389 T4788 T4785 arg2Of sites,and
R3390 T4788 T4786 arg1Of sites,probably
R3391 T4788 T4787 arg1Of sites,others
R3392 T4790 T4791 arg1Of followed,by
R3393 T4792 T4791 arg2Of relocating,by
R3394 T4792 T4793 arg1Of relocating,to
R3395 T4794 T4795 arg1Of mitochondria,or
R3396 T4795 T4793 arg2Of or,to
R3397 T4795 T4797 arg1Of or,for
R3398 T4796 T4795 arg2Of nuclei,or
R3399 T4798 T4797 arg2Of inducing,for
R3400 T4799 T4798 arg2Of apoptosis,inducing
R3401 T4799 T4800 arg1Of apoptosis,(
R3402 T4801 T4802 arg1Of Chang,et
R3403 T4801 T4803 arg1Of Chang,al.
R3404 T4801 T4804 arg1Of Chang,","
R3405 T4804 T4800 arg2Of ",",(
R3406 T4804 T4806 arg1Of ",",","
R3407 T4805 T4804 arg2Of 2007,","
R3408 T4807 T4806 arg2Of 2010,","
R3409 T4808 T4800 arg3Of ),(

2_test

Id Subject Object Predicate Lexical cue
23459853-17142102-38778563 257-261 17142102 denotes 2007
23459853-20542955-38778564 263-267 20542955 denotes 2010

GO-BP

Id Subject Object Predicate Lexical cue
T4034 232-241 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T4028 232-241 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T4047 118-133 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T4084 196-208 http://purl.obolibrary.org/obo/GO_0005739 denotes mitochondria

sentences

Id Subject Object Predicate Lexical cue
T3841 0-269 Sentence denotes Upon exposure to chemicals or environmental stress, such as UV irradiation and chemotherapeutic drugs, WWOX undergoes phosphorylation in Tyr33 and probably others sites, followed by relocating to mitochondria or nuclei for inducing apoptosis (Chang et al., 2007, 2010).
T82 0-269 Sentence denotes Upon exposure to chemicals or environmental stress, such as UV irradiation and chemotherapeutic drugs, WWOX undergoes phosphorylation in Tyr33 and probably others sites, followed by relocating to mitochondria or nuclei for inducing apoptosis (Chang et al., 2007, 2010).

simple1

Id Subject Object Predicate Lexical cue
T4135 103-107 Protein denotes WWOX