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PMC:3585731 / 971-1060 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T27 39-49 Gene_expression denotes production
T19 53-57 Protein denotes TNFα
T18 2-6 Protein denotes RIP1
R3 T19 T27 themeOf TNFα,production

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T309 85-87 IN denotes as
T308 80-84 JJ denotes such
T307 78-79 -COMMA- denotes ,
T306 73-78 NN denotes types
T305 68-72 NN denotes cell
T304 62-67 JJ denotes other
T303 59-61 IN denotes In
T302 53-57 NN denotes TNFα
T301 50-52 IN denotes of
T300 39-49 NN denotes production
T299 29-38 JJ denotes autocrine
T298 25-28 CC denotes and
T297 14-24 NN denotes activation
T296 10-13 NN denotes JNK
T295 7-9 TO denotes to
T294 2-6 NN denotes RIP1
R154 T294 T295 arg1Of RIP1,to
R155 T297 T296 arg1Of activation,JNK
R156 T297 T298 arg1Of activation,and
R157 T298 T295 arg2Of and,to
R158 T300 T298 arg2Of production,and
R159 T300 T299 arg1Of production,autocrine
R160 T300 T301 arg1Of production,of
R161 T302 T301 arg2Of TNFα,of
R162 T306 T303 arg2Of types,In
R163 T306 T304 arg1Of types,other
R164 T306 T305 arg1Of types,cell
R165 T306 T307 arg1Of types,","
R166 T306 T309 arg1Of types,as
R167 T309 T308 arg1Of as,such

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T95 2-6 Protein denotes RIP1
T96 53-57 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T409 2-6 http://www.uniprot.org/uniprot/Q13546 denotes RIP1
T403 53-57 http://www.uniprot.org/uniprot/P01375 denotes TNFα

GO-BP

Id Subject Object Predicate Lexical cue
T133 10-13 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

GO-MF

Id Subject Object Predicate Lexical cue
T136 10-13 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

GO-CC

Id Subject Object Predicate Lexical cue
T138 68-72 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

simple1

Id Subject Object Predicate Lexical cue
T150 2-6 Protein denotes RIP1
T151 53-57 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T360 2-6 Protein denotes RIP1
T361 53-57 Protein denotes TNFα

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T448 2-6 Protein denotes RIP1
T449 53-57 Protein denotes TNFα

DLUT931

Id Subject Object Predicate Lexical cue
T417 2-6 Protein denotes RIP1
T418 53-57 Protein denotes TNFα

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T762 10-24 Positive_regulation denotes JNK activation
T761 29-57 Gene_expression denotes autocrine production of TNFα
T756 50-57 Protein denotes of TNFα
T752 2-6 Protein denotes RIP1
T740 10-13 Protein denotes JNK
T731 62-87 Entity denotes other cell types, such as
R434 T740 T762 themeOf JNK,JNK activation
R439 T756 T761 themeOf of TNFα,autocrine production of TNFα

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T650 85-87 IN denotes as
T649 80-84 JJ denotes such
T648 78-79 , denotes ,
T647 73-78 NNS denotes types
T646 68-72 NN denotes cell
T645 62-67 JJ denotes other
T644 59-61 IN denotes In
T643 57-58 . denotes .
T642 53-57 NNP denotes TNFα
T641 50-52 IN denotes of
T640 39-49 NN denotes production
T639 29-38 NN denotes autocrine
T638 25-28 CC denotes and
T637 14-24 NN denotes activation
T636 10-13 NNP denotes JNK
T635 7-9 TO denotes to
T634 2-6 VBP denotes RIP1
R375 T635 T634 prep to,RIP1
R376 T636 T637 compound JNK,activation
R377 T637 T640 nmod activation,production
R378 T638 T637 cc and,activation
R379 T639 T637 conj autocrine,activation
R380 T640 T635 pobj production,to
R381 T641 T640 prep of,production
R382 T642 T641 pobj TNFα,of
R383 T643 T634 punct .,RIP1
R385 T645 T647 amod other,types
R386 T646 T647 compound cell,types
R387 T647 T644 pobj types,In
R388 T648 T647 punct ",",types
R389 T649 T650 amod such,as
R390 T650 T647 prep as,types

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T481 14-24 Positive_regulation denotes activation
T480 14-24 Positive_regulation denotes activation
T479 53-57 Protein denotes TNFα
T478 10-13 Protein denotes JNK
T477 2-6 Protein denotes RIP1
R222 T478 T480 themeOf JNK,activation
R223 T479 T481 themeOf TNFα,activation

test3

Id Subject Object Predicate Lexical cue
T55 53-57 Protein denotes TNFα
T54 39-49 Gene_expression denotes production
T53 2-6 Protein denotes RIP1
T37 53-57 Protein denotes TNFα
T36 2-6 Protein denotes RIP1
R13 T55 T54 themeOf TNFα,production