PMC:3585731 / 900-1041
Annnotations
testone
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pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T95","span":{"begin":73,"end":77},"obj":"Protein"},{"id":"T96","span":{"begin":124,"end":128},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T409","span":{"begin":73,"end":77},"obj":"http://www.uniprot.org/uniprot/Q13546"},{"id":"T403","span":{"begin":124,"end":128},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T398","span":{"begin":20,"end":23},"obj":"http://www.uniprot.org/uniprot/Q9Y243"},{"id":"T391","span":{"begin":20,"end":23},"obj":"http://www.uniprot.org/uniprot/P31751"},{"id":"T384","span":{"begin":20,"end":23},"obj":"http://www.uniprot.org/uniprot/P31749"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T133","span":{"begin":81,"end":84},"obj":"http://purl.obolibrary.org/obo/GO_0004705"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T136","span":{"begin":81,"end":84},"obj":"http://purl.obolibrary.org/obo/GO_0004705"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T142","span":{"begin":59,"end":65},"obj":"http://purl.obolibrary.org/obo/GO_0031931"},{"id":"T141","span":{"begin":11,"end":17},"obj":"http://purl.obolibrary.org/obo/GO_0031931"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
sentences
{"project":"sentences","denotations":[{"id":"T67","span":{"begin":20,"end":129},"obj":"Sentence"},{"id":"T10","span":{"begin":20,"end":129},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
simple1
{"project":"simple1","denotations":[{"id":"T150","span":{"begin":73,"end":77},"obj":"Protein"},{"id":"T151","span":{"begin":124,"end":128},"obj":"Protein"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T360","span":{"begin":73,"end":77},"obj":"Protein"},{"id":"T361","span":{"begin":124,"end":128},"obj":"Protein"},{"id":"T368","span":{"begin":67,"end":72},"obj":"Positive_regulation"}],"relations":[{"id":"R453","pred":"themeOf","subj":"T360","obj":"T368"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T448","span":{"begin":73,"end":77},"obj":"Protein"},{"id":"T449","span":{"begin":124,"end":128},"obj":"Protein"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T417","span":{"begin":73,"end":77},"obj":"Protein"},{"id":"T418","span":{"begin":124,"end":128},"obj":"Protein"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T763","span":{"begin":59,"end":128},"obj":"Binding"},{"id":"T762","span":{"begin":81,"end":95},"obj":"Positive_regulation"},{"id":"T761","span":{"begin":100,"end":128},"obj":"Gene_expression"},{"id":"T756","span":{"begin":121,"end":128},"obj":"Protein"},{"id":"T752","span":{"begin":73,"end":77},"obj":"Protein"},{"id":"T751","span":{"begin":59,"end":65},"obj":"Entity"},{"id":"T750","span":{"begin":20,"end":23},"obj":"Protein"},{"id":"T740","span":{"begin":81,"end":84},"obj":"Protein"},{"id":"T738","span":{"begin":11,"end":17},"obj":"Entity"},{"id":"T730","span":{"begin":0,"end":18},"obj":"Entity"}],"relations":[{"id":"R434","pred":"themeOf","subj":"T740","obj":"T762"},{"id":"R437","pred":"themeOf","subj":"T751","obj":"T763"},{"id":"R438","pred":"themeOf","subj":"T752","obj":"T763"},{"id":"R439","pred":"themeOf","subj":"T756","obj":"T761"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T645","span":{"begin":133,"end":138},"obj":"JJ"},{"id":"T644","span":{"begin":130,"end":132},"obj":"IN"},{"id":"T643","span":{"begin":128,"end":129},"obj":"."},{"id":"T642","span":{"begin":124,"end":128},"obj":"NNP"},{"id":"T641","span":{"begin":121,"end":123},"obj":"IN"},{"id":"T640","span":{"begin":110,"end":120},"obj":"NN"},{"id":"T639","span":{"begin":100,"end":109},"obj":"NN"},{"id":"T638","span":{"begin":96,"end":99},"obj":"CC"},{"id":"T637","span":{"begin":85,"end":95},"obj":"NN"},{"id":"T636","span":{"begin":81,"end":84},"obj":"NNP"},{"id":"T635","span":{"begin":78,"end":80},"obj":"TO"},{"id":"T634","span":{"begin":73,"end":77},"obj":"VBP"},{"id":"T633","span":{"begin":67,"end":72},"obj":"NNS"},{"id":"T632","span":{"begin":65,"end":66},"obj":","},{"id":"T631","span":{"begin":59,"end":65},"obj":"NNP"},{"id":"T630","span":{"begin":51,"end":58},"obj":"IN"},{"id":"T629","span":{"begin":46,"end":50},"obj":"NN"},{"id":"T628","span":{"begin":43,"end":45},"obj":"IN"},{"id":"T627","span":{"begin":34,"end":42},"obj":"VBN"},{"id":"T626","span":{"begin":32,"end":33},"obj":","},{"id":"T625","span":{"begin":24,"end":32},"obj":"NN"},{"id":"T624","span":{"begin":20,"end":23},"obj":"JJ"},{"id":"T623","span":{"begin":18,"end":19},"obj":"."},{"id":"T622","span":{"begin":17,"end":18},"obj":"-RRB-"},{"id":"T621","span":{"begin":11,"end":17},"obj":"NN"},{"id":"T620","span":{"begin":10,"end":11},"obj":"-LRB-"},{"id":"T619","span":{"begin":8,"end":9},"obj":"CD"},{"id":"T618","span":{"begin":0,"end":7},"obj":"JJ"}],"relations":[{"id":"R358","pred":"nmod","subj":"T618","obj":"T621"},{"id":"R359","pred":"nummod","subj":"T619","obj":"T618"},{"id":"R360","pred":"punct","subj":"T620","obj":"T621"},{"id":"R362","pred":"punct","subj":"T622","obj":"T621"},{"id":"R364","pred":"amod","subj":"T624","obj":"T625"},{"id":"R365","pred":"ROOT","subj":"T625","obj":"T625"},{"id":"R366","pred":"punct","subj":"T626","obj":"T625"},{"id":"R367","pred":"acl","subj":"T627","obj":"T625"},{"id":"R368","pred":"prep","subj":"T628","obj":"T627"},{"id":"R369","pred":"pobj","subj":"T629","obj":"T628"},{"id":"R370","pred":"prep","subj":"T630","obj":"T627"},{"id":"R371","pred":"pobj","subj":"T631","obj":"T630"},{"id":"R372","pred":"punct","subj":"T632","obj":"T634"},{"id":"R373","pred":"nsubj","subj":"T633","obj":"T634"},{"id":"R374","pred":"conj","subj":"T634","obj":"T625"},{"id":"R375","pred":"prep","subj":"T635","obj":"T634"},{"id":"R376","pred":"compound","subj":"T636","obj":"T637"},{"id":"R377","pred":"nmod","subj":"T637","obj":"T640"},{"id":"R378","pred":"cc","subj":"T638","obj":"T637"},{"id":"R379","pred":"conj","subj":"T639","obj":"T637"},{"id":"R380","pred":"pobj","subj":"T640","obj":"T635"},{"id":"R381","pred":"prep","subj":"T641","obj":"T640"},{"id":"R382","pred":"pobj","subj":"T642","obj":"T641"},{"id":"R383","pred":"punct","subj":"T643","obj":"T634"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T481","span":{"begin":85,"end":95},"obj":"Positive_regulation"},{"id":"T480","span":{"begin":85,"end":95},"obj":"Positive_regulation"},{"id":"T479","span":{"begin":124,"end":128},"obj":"Protein"},{"id":"T478","span":{"begin":81,"end":84},"obj":"Protein"},{"id":"T477","span":{"begin":73,"end":77},"obj":"Protein"},{"id":"T476","span":{"begin":20,"end":23},"obj":"Protein"}],"relations":[{"id":"R222","pred":"themeOf","subj":"T478","obj":"T480"},{"id":"R223","pred":"themeOf","subj":"T479","obj":"T481"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}
test3
{"project":"test3","denotations":[{"id":"T55","span":{"begin":124,"end":128},"obj":"Protein"},{"id":"T54","span":{"begin":110,"end":120},"obj":"Gene_expression"},{"id":"T53","span":{"begin":73,"end":77},"obj":"Protein"},{"id":"T37","span":{"begin":124,"end":128},"obj":"Protein"},{"id":"T36","span":{"begin":73,"end":77},"obj":"Protein"}],"relations":[{"id":"R13","pred":"themeOf","subj":"T55","obj":"T54"}],"text":"complex 1 (mTORC1). Akt activity, mediated in part through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other ce"}