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PMC:3585731 / 8900-9071 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T2878 146-150 Protein denotes bFGF
T2877 92-96 Protein denotes TNFα

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3741 169-170 -RRB- denotes )
T3740 166-169 NN denotes S1C
T3739 161-165 NN denotes Fig.
T3738 160-161 -LRB- denotes (
T3737 146-159 NN denotes bFGF/zVAD.fmk
T3736 141-145 IN denotes with
T3735 133-140 VB denotes treated
T3734 122-132 NN denotes conditions
T3733 117-121 JJ denotes free
T3732 111-116 NN denotes serum
T3731 108-110 CC denotes or
T3730 106-107 -RRB- denotes )
T3729 103-106 NN denotes S1B
T3728 98-102 NN denotes Fig.
T3727 97-98 -LRB- denotes (
T3726 92-96 NN denotes TNFα
T3725 89-91 CC denotes or
T3724 80-88 NN denotes zVAD.fmk
T3723 75-79 IN denotes with
T3722 67-74 VB denotes treated
T3721 57-66 NN denotes condtions
T3720 51-56 NN denotes serum
T3719 45-50 IN denotes under
T3718 39-44 NN denotes death
T3717 34-38 NN denotes cell
T3716 29-33 NN denotes L929
T3715 21-28 VB denotes protect
T3714 18-20 TO denotes to
T3713 11-17 JJ denotes unable
T3712 7-10 VB denotes was
T3711 0-6 NN denotes Nec-1i
R2515 T3711 T3712 arg1Of Nec-1i,was
R2516 T3711 T3713 arg1Of Nec-1i,unable
R2517 T3711 T3715 arg1Of Nec-1i,protect
R2518 T3713 T3712 arg2Of unable,was
R2519 T3715 T3713 arg2Of protect,unable
R2520 T3715 T3714 arg1Of protect,to
R2521 T3715 T3719 arg1Of protect,under
R2522 T3718 T3715 arg2Of death,protect
R2523 T3718 T3716 arg1Of death,L929
R2524 T3718 T3717 arg1Of death,cell
R2525 T3721 T3720 arg1Of condtions,serum
R2526 T3721 T3722 arg2Of condtions,treated
R2527 T3721 T3731 arg1Of condtions,or
R2528 T3722 T3723 arg1Of treated,with
R2529 T3724 T3725 arg1Of zVAD.fmk,or
R2530 T3725 T3723 arg2Of or,with
R2531 T3725 T3727 arg1Of or,(
R2532 T3726 T3725 arg2Of TNFα,or
R2533 T3729 T3727 arg2Of S1B,(
R2534 T3729 T3728 arg1Of S1B,Fig.
R2535 T3730 T3727 arg3Of ),(
R2536 T3731 T3719 arg2Of or,under
R2537 T3734 T3731 arg2Of conditions,or
R2538 T3734 T3732 arg1Of conditions,serum
R2539 T3734 T3733 arg1Of conditions,free
R2540 T3734 T3735 arg2Of conditions,treated
R2541 T3735 T3736 arg1Of treated,with
R2542 T3737 T3736 arg2Of bFGF/zVAD.fmk,with
R2543 T3737 T3738 arg1Of bFGF/zVAD.fmk,(
R2544 T3740 T3738 arg2Of S1C,(
R2545 T3740 T3739 arg1Of S1C,Fig.
R2546 T3741 T3738 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3060 146-150 Protein denotes bFGF
T3059 92-96 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3968 146-150 http://www.uniprot.org/uniprot/Q788Q8 denotes bFGF
T3957 92-96 http://www.uniprot.org/uniprot/P01375 denotes TNFα

UBERON-AE

Id Subject Object Predicate Lexical cue
T2965 111-116 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
T2964 51-56 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

GO-BP

Id Subject Object Predicate Lexical cue
T3130 39-44 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T3121 34-44 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death

sentences

Id Subject Object Predicate Lexical cue
T2986 0-171 Sentence denotes Nec-1i was unable to protect L929 cell death under serum condtions treated with zVAD.fmk or TNFα (Fig. S1B) or serum free conditions treated with bFGF/zVAD.fmk (Fig. S1C).
T56 0-171 Sentence denotes Nec-1i was unable to protect L929 cell death under serum condtions treated with zVAD.fmk or TNFα (Fig. S1B) or serum free conditions treated with bFGF/zVAD.fmk (Fig. S1C).

simple1

Id Subject Object Predicate Lexical cue
T3192 146-150 Protein denotes bFGF
T3191 92-96 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T3938 146-150 Protein denotes bFGF
T3937 92-96 Protein denotes TNFα

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4069 146-150 Protein denotes bFGF
T4068 92-96 Protein denotes TNFα

DLUT931

Id Subject Object Predicate Lexical cue
T3995 146-150 Protein denotes bFGF
T3994 92-96 Protein denotes TNFα

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4935 146-150 Protein denotes bFGF
T4929 29-33 Entity denotes L929
T4916 80-88 Entity denotes zVAD.fmk
T4955 151-159 Entity denotes zVAD.fmk
T4949 92-96 Protein denotes TNFα

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4677 146-155 NNP denotes bFGF/zVAD
T4676 141-145 IN denotes with
T4675 133-140 VBN denotes treated
T4674 122-132 NNS denotes conditions
T4673 117-121 JJ denotes free
T4672 111-116 NN denotes serum
T4671 108-110 CC denotes or
T4670 106-107 -RRB- denotes )
T4669 103-106 CD denotes S1B
T4668 101-102 . denotes .
T4667 98-101 NNP denotes Fig
T4666 97-98 -LRB- denotes (
T4665 92-96 NNP denotes TNFα
T4664 89-91 CC denotes or
T4663 80-88 NNP denotes zVAD.fmk
T4662 75-79 IN denotes with
T4661 67-74 VBN denotes treated
T4660 57-66 NNS denotes condtions
T4659 51-56 NN denotes serum
T4658 45-50 IN denotes under
T4657 39-44 NN denotes death
T4656 34-38 NN denotes cell
T4655 29-33 NNP denotes L929
T4654 21-28 VB denotes protect
T4653 18-20 TO denotes to
T4652 11-17 JJ denotes unable
T4651 7-10 VBD denotes was
T4650 0-6 NN denotes Nec-1i
T4685 170-171 . denotes .
T4684 169-170 -RRB- denotes )
T4683 166-169 CD denotes S1C
T4682 164-165 . denotes .
T4681 161-164 NNP denotes Fig
T4680 160-161 -LRB- denotes (
T4679 156-159 NN denotes fmk
T4678 155-156 . denotes .
R3229 T4650 T4651 nsubj Nec-1i,was
R3231 T4651 T4651 ROOT was,was
R3232 T4652 T4651 acomp unable,was
R3233 T4653 T4654 aux to,protect
R3234 T4654 T4652 xcomp protect,unable
R3236 T4655 T4657 compound L929,death
R3237 T4656 T4657 compound cell,death
R3238 T4657 T4654 dobj death,protect
R3240 T4658 T4654 prep under,protect
R3241 T4659 T4660 compound serum,condtions
R3242 T4660 T4658 pobj condtions,under
R3244 T4661 T4660 acl treated,condtions
R3245 T4662 T4661 prep with,treated
R3247 T4663 T4662 pobj zVAD.fmk,with
R3248 T4664 T4663 cc or,zVAD.fmk
R3249 T4665 T4663 conj TNFα,zVAD.fmk
R3250 T4666 T4667 punct (,Fig
R3251 T4667 T4665 appos Fig,TNFα
R3252 T4668 T4651 punct .,was
R3254 T4669 T4669 ROOT S1B,S1B
R3255 T4670 T4669 punct ),S1B
R3256 T4671 T4669 cc or,S1B
R3257 T4672 T4674 nmod serum,conditions
R3259 T4673 T4674 amod free,conditions
R3260 T4674 T4669 conj conditions,S1B
R3262 T4675 T4674 acl treated,conditions
R3263 T4676 T4675 prep with,treated
R3264 T4677 T4676 pobj bFGF/zVAD,with
R3266 T4678 T4669 punct .,S1B
R3267 T4679 T4679 ROOT fmk,fmk
R3268 T4680 T4681 punct (,Fig
R3269 T4681 T4679 appos Fig,fmk
R3271 T4682 T4683 punct .,S1C
R3275 T4683 T4683 ROOT S1C,S1C
R3277 T4684 T4683 punct ),S1C
R3278 T4685 T4679 punct .,fmk

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T4128 166-169 Protein denotes S1C
T4127 161-164 Protein denotes Fig
T4126 146-159 Protein denotes bFGF/zVAD.fmk
T4125 98-106 Protein denotes Fig. S1B
T4124 92-96 Protein denotes TNFα
T4123 80-88 Protein denotes zVAD.fmk
T4122 0-6 Protein denotes Nec-1i

test3

Id Subject Object Predicate Lexical cue
T2946 146-150 Protein denotes bFGF
T2945 92-96 Protein denotes TNFα
T2915 146-150 Protein denotes bFGF
T2914 92-96 Protein denotes TNFα