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PMC:3585731 / 622-742 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T26 60-75 Phosphorylation denotes phosphorylation
T25 30-39 Regulation denotes dependent
T24 10-19 Positive_regulation denotes activated
T16 25-29 Protein denotes RIP1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T257 107-117 NN denotes activation
T256 102-106 DT denotes this
T255 100-101 -COMMA- denotes ,
T254 95-100 NN denotes cells
T253 90-94 NN denotes L929
T252 87-89 IN denotes In
T251 79-85 NN denotes Thr308
T250 76-78 IN denotes on
T249 60-75 NN denotes phosphorylation
T248 56-59 PRP-DOLLAR- denotes its
T247 48-55 IN denotes through
T246 40-47 NN denotes fashion
T245 30-39 JJ denotes dependent
T244 25-29 NN denotes RIP1
T243 23-24 DT denotes a
T242 20-22 IN denotes in
T241 10-19 VB denotes activated
T240 7-9 VB denotes is
T239 3-6 NN denotes Akt
T238 1-2 -COMMA- denotes ,
R99 T239 T240 arg1Of Akt,is
R100 T239 T241 arg2Of Akt,activated
R102 T241 T238 arg1Of activated,","
R103 T241 T240 arg2Of activated,is
R104 T241 T242 arg1Of activated,in
R105 T241 T247 arg1Of activated,through
R106 T245 T244 arg1Of dependent,RIP1
R107 T246 T242 arg2Of fashion,in
R108 T246 T243 arg1Of fashion,a
R109 T246 T245 arg1Of fashion,dependent
R110 T249 T247 arg2Of phosphorylation,through
R111 T249 T248 arg1Of phosphorylation,its
R112 T249 T250 arg1Of phosphorylation,on
R113 T251 T250 arg2Of Thr308,on
R114 T254 T252 arg2Of cells,In
R115 T254 T253 arg1Of cells,L929
R116 T257 T256 arg1Of activation,this

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T93 25-29 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T407 25-29 http://www.uniprot.org/uniprot/Q13546 denotes RIP1
T396 3-6 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T389 3-6 http://www.uniprot.org/uniprot/P31751 denotes Akt
T382 3-6 http://www.uniprot.org/uniprot/P31749 denotes Akt

GO-BP

Id Subject Object Predicate Lexical cue
T131 95-117 http://purl.obolibrary.org/obo/GO_0001775 denotes cells, this activation
T130 60-75 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

simple1

Id Subject Object Predicate Lexical cue
T148 25-29 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T358 25-29 Protein denotes RIP1

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T446 25-29 Protein denotes RIP1

DLUT931

Id Subject Object Predicate Lexical cue
T415 25-29 Protein denotes RIP1

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T745 25-39 Protein denotes RIP1 dependent
T737 76-85 Entity denotes on Thr308
T729 3-6 Protein denotes Akt
R432 T737 T729 partOf on Thr308,Akt

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T595 107-117 NN denotes activation
T594 102-106 DT denotes this
T593 100-101 , denotes ,
T592 95-100 NNS denotes cells
T591 90-94 CD denotes L929
T590 87-89 IN denotes In
T589 85-86 . denotes .
T588 79-85 NNP denotes Thr308
T587 76-78 IN denotes on
T586 60-75 NN denotes phosphorylation
T585 56-59 PRP$ denotes its
T584 48-55 IN denotes through
T583 40-47 NN denotes fashion
T582 30-39 JJ denotes dependent
T581 25-29 NNP denotes RIP1
T580 23-24 DT denotes a
T579 20-22 IN denotes in
T578 10-19 VBN denotes activated
T577 7-9 VBZ denotes is
T576 3-6 NNP denotes Akt
T575 1-2 , denotes ,
R315 T575 T578 punct ",",activated
R316 T576 T578 nsubjpass Akt,activated
R317 T577 T578 auxpass is,activated
R318 T578 T578 ROOT activated,activated
R319 T579 T578 prep in,activated
R320 T580 T583 det a,fashion
R321 T581 T583 nmod RIP1,fashion
R322 T582 T583 amod dependent,fashion
R323 T583 T579 pobj fashion,in
R324 T584 T578 prep through,activated
R325 T585 T586 poss its,phosphorylation
R326 T586 T584 pobj phosphorylation,through
R327 T587 T586 prep on,phosphorylation
R328 T588 T587 pobj Thr308,on
R329 T589 T578 punct .,activated
R331 T591 T592 nummod L929,cells
R332 T592 T590 pobj cells,In
R334 T594 T595 det this,activation

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T474 10-19 Positive_regulation denotes activated
T473 60-75 Phosphorylation denotes phosphorylation
T472 10-19 Positive_regulation denotes activated
T471 79-85 Protein denotes Thr308
T470 25-29 Protein denotes RIP1
T469 3-6 Protein denotes Akt
R219 T469 T472 themeOf Akt,activated
R220 T471 T473 themeOf Thr308,phosphorylation
R221 T473 T474 themeOf phosphorylation,activated

test3

Id Subject Object Predicate Lexical cue
T51 60-75 Phosphorylation denotes phosphorylation
T50 25-29 Protein denotes RIP1
T49 10-19 Positive_regulation denotes activated
T34 25-29 Protein denotes RIP1
R12 T50 T49 themeOf RIP1,activated