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PMC:3585731 / 605-708 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T26 77-92 Phosphorylation denotes phosphorylation
T25 47-56 Regulation denotes dependent
T24 27-36 Positive_regulation denotes activated
T16 42-46 Protein denotes RIP1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T251 96-102 NN denotes Thr308
T250 93-95 IN denotes on
T249 77-92 NN denotes phosphorylation
T248 73-76 PRP-DOLLAR- denotes its
T247 65-72 IN denotes through
T246 57-64 NN denotes fashion
T245 47-56 JJ denotes dependent
T244 42-46 NN denotes RIP1
T243 40-41 DT denotes a
T242 37-39 IN denotes in
T241 27-36 VB denotes activated
T240 24-26 VB denotes is
T239 20-23 NN denotes Akt
T238 18-19 -COMMA- denotes ,
T237 7-18 NN denotes necroptosis
T236 0-6 IN denotes During
R98 T237 T236 arg2Of necroptosis,During
R99 T239 T240 arg1Of Akt,is
R100 T239 T241 arg2Of Akt,activated
R101 T241 T236 arg1Of activated,During
R102 T241 T238 arg1Of activated,","
R103 T241 T240 arg2Of activated,is
R104 T241 T242 arg1Of activated,in
R105 T241 T247 arg1Of activated,through
R106 T245 T244 arg1Of dependent,RIP1
R107 T246 T242 arg2Of fashion,in
R108 T246 T243 arg1Of fashion,a
R109 T246 T245 arg1Of fashion,dependent
R110 T249 T247 arg2Of phosphorylation,through
R111 T249 T248 arg1Of phosphorylation,its
R112 T249 T250 arg1Of phosphorylation,on
R113 T251 T250 arg2Of Thr308,on

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T93 42-46 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T407 42-46 http://www.uniprot.org/uniprot/Q13546 denotes RIP1
T396 20-23 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T389 20-23 http://www.uniprot.org/uniprot/P31751 denotes Akt
T382 20-23 http://www.uniprot.org/uniprot/P31749 denotes Akt

GO-BP

Id Subject Object Predicate Lexical cue
T130 77-92 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T111 7-18 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T103 7-18 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis

sentences

Id Subject Object Predicate Lexical cue
T64 0-103 Sentence denotes During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308.
T7 0-103 Sentence denotes During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308.

simple1

Id Subject Object Predicate Lexical cue
T148 42-46 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T358 42-46 Protein denotes RIP1

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T446 42-46 Protein denotes RIP1

DLUT931

Id Subject Object Predicate Lexical cue
T415 42-46 Protein denotes RIP1

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T758 0-102 Phosphorylation denotes During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308
T757 0-102 Positive_regulation denotes During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308
T745 42-56 Protein denotes RIP1 dependent
T737 93-102 Entity denotes on Thr308
T729 20-23 Protein denotes Akt
R433 T737 T758 siteOf on Thr308,"During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308"
R429 T729 T757 themeOf Akt,"During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308"
R430 T729 T758 themeOf Akt,"During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308"
R432 T737 T729 partOf on Thr308,Akt

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T573 0-6 IN denotes During
T589 102-103 . denotes .
T588 96-102 NNP denotes Thr308
T587 93-95 IN denotes on
T586 77-92 NN denotes phosphorylation
T585 73-76 PRP$ denotes its
T584 65-72 IN denotes through
T583 57-64 NN denotes fashion
T582 47-56 JJ denotes dependent
T581 42-46 NNP denotes RIP1
T580 40-41 DT denotes a
T579 37-39 IN denotes in
T578 27-36 VBN denotes activated
T577 24-26 VBZ denotes is
T576 20-23 NNP denotes Akt
T575 18-19 , denotes ,
T574 7-18 NN denotes necroptosis
R313 T573 T578 prep During,activated
R314 T574 T573 pobj necroptosis,During
R315 T575 T578 punct ",",activated
R316 T576 T578 nsubjpass Akt,activated
R317 T577 T578 auxpass is,activated
R318 T578 T578 ROOT activated,activated
R319 T579 T578 prep in,activated
R320 T580 T583 det a,fashion
R321 T581 T583 nmod RIP1,fashion
R322 T582 T583 amod dependent,fashion
R323 T583 T579 pobj fashion,in
R324 T584 T578 prep through,activated
R325 T585 T586 poss its,phosphorylation
R326 T586 T584 pobj phosphorylation,through
R327 T587 T586 prep on,phosphorylation
R328 T588 T587 pobj Thr308,on
R329 T589 T578 punct .,activated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T474 27-36 Positive_regulation denotes activated
T473 77-92 Phosphorylation denotes phosphorylation
T472 27-36 Positive_regulation denotes activated
T471 96-102 Protein denotes Thr308
T470 42-46 Protein denotes RIP1
T469 20-23 Protein denotes Akt
R219 T469 T472 themeOf Akt,activated
R220 T471 T473 themeOf Thr308,phosphorylation
R221 T473 T474 themeOf phosphorylation,activated

test3

Id Subject Object Predicate Lexical cue
T51 77-92 Phosphorylation denotes phosphorylation
T50 42-46 Protein denotes RIP1
T49 27-36 Positive_regulation denotes activated
T34 42-46 Protein denotes RIP1
R12 T50 T49 themeOf RIP1,activated