PMC:3585731 / 605-708
Annnotations
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26 | 77-92 | Phosphorylation | denotes | phosphorylation |
| T25 | 47-56 | Regulation | denotes | dependent |
| T24 | 27-36 | Positive_regulation | denotes | activated |
| T16 | 42-46 | Protein | denotes | RIP1 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T251 | 96-102 | NN | denotes | Thr308 |
| T250 | 93-95 | IN | denotes | on |
| T249 | 77-92 | NN | denotes | phosphorylation |
| T248 | 73-76 | PRP-DOLLAR- | denotes | its |
| T247 | 65-72 | IN | denotes | through |
| T246 | 57-64 | NN | denotes | fashion |
| T245 | 47-56 | JJ | denotes | dependent |
| T244 | 42-46 | NN | denotes | RIP1 |
| T243 | 40-41 | DT | denotes | a |
| T242 | 37-39 | IN | denotes | in |
| T241 | 27-36 | VB | denotes | activated |
| T240 | 24-26 | VB | denotes | is |
| T239 | 20-23 | NN | denotes | Akt |
| T238 | 18-19 | -COMMA- | denotes | , |
| T237 | 7-18 | NN | denotes | necroptosis |
| T236 | 0-6 | IN | denotes | During |
| R98 | T237 | T236 | arg2Of | necroptosis,During |
| R99 | T239 | T240 | arg1Of | Akt,is |
| R100 | T239 | T241 | arg2Of | Akt,activated |
| R101 | T241 | T236 | arg1Of | activated,During |
| R102 | T241 | T238 | arg1Of | activated,"," |
| R103 | T241 | T240 | arg2Of | activated,is |
| R104 | T241 | T242 | arg1Of | activated,in |
| R105 | T241 | T247 | arg1Of | activated,through |
| R106 | T245 | T244 | arg1Of | dependent,RIP1 |
| R107 | T246 | T242 | arg2Of | fashion,in |
| R108 | T246 | T243 | arg1Of | fashion,a |
| R109 | T246 | T245 | arg1Of | fashion,dependent |
| R110 | T249 | T247 | arg2Of | phosphorylation,through |
| R111 | T249 | T248 | arg1Of | phosphorylation,its |
| R112 | T249 | T250 | arg1Of | phosphorylation,on |
| R113 | T251 | T250 | arg2Of | Thr308,on |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T93 | 42-46 | Protein | denotes | RIP1 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T407 | 42-46 | http://www.uniprot.org/uniprot/Q13546 | denotes | RIP1 |
| T396 | 20-23 | http://www.uniprot.org/uniprot/Q9Y243 | denotes | Akt |
| T389 | 20-23 | http://www.uniprot.org/uniprot/P31751 | denotes | Akt |
| T382 | 20-23 | http://www.uniprot.org/uniprot/P31749 | denotes | Akt |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T130 | 77-92 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T111 | 7-18 | http://purl.obolibrary.org/obo/GO_0097528 | denotes | necroptosis |
| T103 | 7-18 | http://purl.obolibrary.org/obo/GO_0070266 | denotes | necroptosis |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T64 | 0-103 | Sentence | denotes | During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308. |
| T7 | 0-103 | Sentence | denotes | During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308. |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T148 | 42-46 | Protein | denotes | RIP1 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T358 | 42-46 | Protein | denotes | RIP1 |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T446 | 42-46 | Protein | denotes | RIP1 |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T415 | 42-46 | Protein | denotes | RIP1 |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T758 | 0-102 | Phosphorylation | denotes | During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308 |
| T757 | 0-102 | Positive_regulation | denotes | During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308 |
| T745 | 42-56 | Protein | denotes | RIP1 dependent |
| T737 | 93-102 | Entity | denotes | on Thr308 |
| T729 | 20-23 | Protein | denotes | Akt |
| R433 | T737 | T758 | siteOf | on Thr308,"During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308" |
| R429 | T729 | T757 | themeOf | Akt,"During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308" |
| R430 | T729 | T758 | themeOf | Akt,"During necroptosis, Akt is activated in a RIP1 dependent fashion through its phosphorylation on Thr308" |
| R432 | T737 | T729 | partOf | on Thr308,Akt |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T573 | 0-6 | IN | denotes | During |
| T589 | 102-103 | . | denotes | . |
| T588 | 96-102 | NNP | denotes | Thr308 |
| T587 | 93-95 | IN | denotes | on |
| T586 | 77-92 | NN | denotes | phosphorylation |
| T585 | 73-76 | PRP$ | denotes | its |
| T584 | 65-72 | IN | denotes | through |
| T583 | 57-64 | NN | denotes | fashion |
| T582 | 47-56 | JJ | denotes | dependent |
| T581 | 42-46 | NNP | denotes | RIP1 |
| T580 | 40-41 | DT | denotes | a |
| T579 | 37-39 | IN | denotes | in |
| T578 | 27-36 | VBN | denotes | activated |
| T577 | 24-26 | VBZ | denotes | is |
| T576 | 20-23 | NNP | denotes | Akt |
| T575 | 18-19 | , | denotes | , |
| T574 | 7-18 | NN | denotes | necroptosis |
| R313 | T573 | T578 | prep | During,activated |
| R314 | T574 | T573 | pobj | necroptosis,During |
| R315 | T575 | T578 | punct | ",",activated |
| R316 | T576 | T578 | nsubjpass | Akt,activated |
| R317 | T577 | T578 | auxpass | is,activated |
| R318 | T578 | T578 | ROOT | activated,activated |
| R319 | T579 | T578 | prep | in,activated |
| R320 | T580 | T583 | det | a,fashion |
| R321 | T581 | T583 | nmod | RIP1,fashion |
| R322 | T582 | T583 | amod | dependent,fashion |
| R323 | T583 | T579 | pobj | fashion,in |
| R324 | T584 | T578 | prep | through,activated |
| R325 | T585 | T586 | poss | its,phosphorylation |
| R326 | T586 | T584 | pobj | phosphorylation,through |
| R327 | T587 | T586 | prep | on,phosphorylation |
| R328 | T588 | T587 | pobj | Thr308,on |
| R329 | T589 | T578 | punct | .,activated |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T474 | 27-36 | Positive_regulation | denotes | activated |
| T473 | 77-92 | Phosphorylation | denotes | phosphorylation |
| T472 | 27-36 | Positive_regulation | denotes | activated |
| T471 | 96-102 | Protein | denotes | Thr308 |
| T470 | 42-46 | Protein | denotes | RIP1 |
| T469 | 20-23 | Protein | denotes | Akt |
| R219 | T469 | T472 | themeOf | Akt,activated |
| R220 | T471 | T473 | themeOf | Thr308,phosphorylation |
| R221 | T473 | T474 | themeOf | phosphorylation,activated |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T51 | 77-92 | Phosphorylation | denotes | phosphorylation |
| T50 | 42-46 | Protein | denotes | RIP1 |
| T49 | 27-36 | Positive_regulation | denotes | activated |
| T34 | 42-46 | Protein | denotes | RIP1 |
| R12 | T50 | T49 | themeOf | RIP1,activated |