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PMC:3585731 / 5430-5581 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T2859 86-95 Protein denotes caspase-8
T2858 42-46 Protein denotes TNFα

2_test

Id Subject Object Predicate Lexical cue
23469174-19109899-90505413 48-50 19109899 denotes 10
23469174-16408008-90505414 54-56 16408008 denotes 17

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3266 146-148 IN denotes by
T3265 143-145 CC denotes or
T3264 133-142 NN denotes knockdown
T3263 127-132 NN denotes siRNA
T3262 119-126 IN denotes through
T3261 112-118 CC denotes either
T3260 110-111 -COMMA- denotes ,
T3259 105-110 RB denotes alone
T3258 96-104 NN denotes activity
T3257 86-95 NN denotes caspase-8
T3256 83-85 IN denotes of
T3255 72-82 NN denotes inhibition
T3254 70-71 -COMMA- denotes ,
T3253 62-70 NN denotes addition
T3252 59-61 IN denotes In
T3251 56-57 -RRB- denotes ]
T3250 54-56 CD denotes 17
T3249 53-54 -LRB- denotes [
T3248 51-52 -COMMA- denotes ,
T3247 50-51 -RRB- denotes ]
T3246 48-50 CD denotes 10
T3245 47-48 -LRB- denotes [
T3244 42-46 NN denotes TNFα
T3243 37-41 IN denotes with
T3242 25-36 NN denotes stimulation
T3241 15-24 VB denotes following
T3240 9-14 NN denotes death
T3239 4-8 NN denotes cell
R2042 T3246 T3245 arg2Of 10,[
R2043 T3247 T3245 arg3Of ],[
R2044 T3250 T3249 arg2Of 17,[
R2045 T3251 T3249 arg3Of ],[
R2046 T3253 T3252 arg2Of addition,In
R2047 T3255 T3256 arg1Of inhibition,of
R2051 T3258 T3256 arg2Of activity,of
R2052 T3258 T3257 arg1Of activity,caspase-8
R2053 T3258 T3259 arg1Of activity,alone
R2054 T3262 T3265 arg1Of through,or
R2055 T3264 T3262 arg2Of knockdown,through
R2056 T3264 T3263 arg1Of knockdown,siRNA
R2057 T3265 T3261 arg1Of or,either
R2058 T3266 T3265 arg2Of by,or
R2037 T3240 T3239 arg1Of death,cell
R2038 T3242 T3241 arg2Of stimulation,following
R2039 T3242 T3243 arg1Of stimulation,with
R2040 T3244 T3243 arg2Of TNFα,with
R2041 T3244 T3245 arg1Of TNFα,[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3041 86-95 Protein denotes caspase-8
T3040 42-46 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3953 42-46 http://www.uniprot.org/uniprot/P01375 denotes TNFα

GO-BP

Id Subject Object Predicate Lexical cue
T3122 9-14 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T3117 4-14 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death

simple1

Id Subject Object Predicate Lexical cue
T3173 86-95 Protein denotes caspase-8
T3172 42-46 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T3946 72-82 Negative_regulation denotes inhibition
T3919 86-95 Protein denotes caspase-8
T3918 42-46 Protein denotes TNFα
R2718 T3919 T3946 themeOf caspase-8,inhibition

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4077 72-82 Negative_regulation denotes inhibition
T4050 86-95 Protein denotes caspase-8
T4049 42-46 Protein denotes TNFα
R2745 T4050 T4077 themeOf caspase-8,inhibition

DLUT931

Id Subject Object Predicate Lexical cue
T4004 133-142 Negative_regulation denotes knockdown
T4003 72-82 Negative_regulation denotes inhibition
T3976 86-95 Protein denotes caspase-8
T3975 42-46 Protein denotes TNFα
R2738 T4003 T4004 themeOf inhibition,knockdown
R2725 T3976 T4003 themeOf caspase-8,inhibition

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4985 62-104 Negative_regulation denotes addition, inhibition of caspase-8 activity
T4974 42-57 Protein denotes TNFα [10], [17]
T4951 86-95 Protein denotes caspase-8

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4188 146-148 IN denotes by
T4187 143-145 CC denotes or
T4186 133-142 NN denotes knockdown
T4185 127-132 NNP denotes siRNA
T4184 119-126 IN denotes through
T4183 112-118 DT denotes either
T4182 110-111 , denotes ,
T4181 105-110 RB denotes alone
T4180 96-104 NN denotes activity
T4179 86-95 JJ denotes caspase-8
T4178 83-85 IN denotes of
T4177 72-82 NN denotes inhibition
T4176 70-71 , denotes ,
T4175 62-70 NN denotes addition
T4174 59-61 IN denotes In
T4173 57-58 . denotes .
T4172 56-57 NNP denotes ]
T4171 54-56 CD denotes 17
T4170 53-54 NNP denotes [
T4169 51-52 , denotes ,
T4168 50-51 NNP denotes ]
T4167 48-50 CD denotes 10
T4166 47-48 NNP denotes [
T4165 42-46 NNP denotes TNFα
T4164 37-41 IN denotes with
T4163 25-36 NN denotes stimulation
T4162 15-24 VBG denotes following
T4161 9-14 NN denotes death
T4160 4-8 NN denotes cell
R2780 T4160 T4161 compound cell,death
R2781 T4161 T4162 npadvmod death,following
R2782 T4162 T4163 amod following,stimulation
R2785 T4165 T4166 compound TNFα,[
R2786 T4166 T4164 pobj [,with
R2787 T4167 T4168 nummod 10,]
R2788 T4168 T4166 conj ],[
R2789 T4169 T4168 punct ",",]
R2790 T4170 T4172 nmod [,]
R2791 T4171 T4172 nummod 17,]
R2792 T4172 T4168 conj ],]
R2795 T4175 T4174 pobj addition,In
R2798 T4178 T4177 prep of,inhibition
R2799 T4179 T4180 amod caspase-8,activity
R2800 T4180 T4178 pobj activity,of
R2801 T4181 T4180 advmod alone,activity
R2804 T4184 T4183 prep through,either
R2805 T4185 T4186 compound siRNA,knockdown
R2806 T4186 T4184 pobj knockdown,through
R2807 T4187 T4184 cc or,through
R2808 T4188 T4184 conj by,through

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T4084 86-93 Protein denotes caspase
T4083 42-51 Protein denotes TNFα [10]

test3

Id Subject Object Predicate Lexical cue
T2896 86-95 Protein denotes caspase-8
T2895 42-46 Protein denotes TNFα
T2926 86-95 Protein denotes caspase-8
T2925 42-46 Protein denotes TNFα
T2924 15-24 Positive_regulation denotes following