PMC:3585731 / 53907-54464
Annnotations
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26705 | 495-499 | Protein | denotes | TNFα |
| T26704 | 296-301 | Protein | denotes | Mapk9 |
| T26703 | 269-274 | Protein | denotes | Mapk8 |
| T26702 | 206-210 | Protein | denotes | PDK1 |
| T26701 | 154-158 | Protein | denotes | Akt3 |
| T26700 | 128-132 | Protein | denotes | Akt2 |
| T26699 | 102-106 | Protein | denotes | Akt1 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26858 | 555-556 | -RRB- | denotes | ) |
| T26857 | 546-555 | NN | denotes | viability |
| T26856 | 541-545 | NN | denotes | cell |
| T26855 | 540-541 | -LRB- | denotes | ( |
| T26854 | 537-539 | NN | denotes | hr |
| T26853 | 534-536 | CD | denotes | 24 |
| T26852 | 531-533 | CC | denotes | or |
| T26851 | 529-530 | -RRB- | denotes | ) |
| T26850 | 525-529 | NN | denotes | blot |
| T26849 | 517-524 | JJ | denotes | Western |
| T26848 | 514-516 | CC | denotes | or |
| T26847 | 510-513 | NN | denotes | RNA |
| T26846 | 509-510 | -LRB- | denotes | ( |
| T26845 | 506-508 | NN | denotes | hr |
| T26844 | 504-505 | CD | denotes | 9 |
| T26843 | 500-503 | IN | denotes | for |
| T26842 | 495-499 | NN | denotes | TNFα |
| T26841 | 492-494 | CC | denotes | or |
| T26840 | 483-491 | NN | denotes | zVAD.fmk |
| T26839 | 478-482 | IN | denotes | with |
| T26838 | 470-477 | VB | denotes | treated |
| T26837 | 465-469 | VB | denotes | were |
| T26836 | 459-464 | NN | denotes | cells |
| T26835 | 457-458 | -COMMA- | denotes | , |
| T26834 | 455-457 | NN | denotes | hr |
| T26833 | 452-454 | CD | denotes | 72 |
| T26832 | 446-451 | IN | denotes | After |
| T26831 | 417-432 | NN | denotes | ufacturer’s rec |
| T26830 | 403-417 | NN | denotes | cording to man |
| T26829 | 401-403 | TO | denotes | ac |
| T26828 | 392-401 | VB | denotes | trogen), |
| T26827 | 391-392 | -COMMA- | denotes | i |
| T26826 | 390-391 | -RRB- | denotes | v |
| T26825 | 380-390 | NN | denotes | eagent (In |
| T26824 | 379-380 | -LRB- | denotes | r |
| T26823 | 372-379 | NN | denotes | NAiMAX |
| T26822 | 365-372 | NN | denotes | using R |
| T26821 | 360-365 | VB | denotes | cted |
| T26820 | 349-360 | VB | denotes | ere transfe |
| T26819 | 345-349 | VB | denotes | NA w |
| T26818 | 340-345 | NN | denotes | . siR |
| T26817 | 339-340 | -RRB- | denotes | ) |
| T26816 | 328-339 | NN | denotes | L-043776-00 |
| T26815 | 327-328 | -LRB- | denotes | ( |
| T26814 | 323-326 | NN | denotes | Jun |
| T26813 | 317-322 | NN | denotes | mouse |
| T26812 | 315-316 | -COMMA- | denotes | , |
| T26811 | 314-315 | -RRB- | denotes | ) |
| T26810 | 303-314 | NN | denotes | J-040134-05 |
| T26809 | 302-303 | -LRB- | denotes | ( |
| T26808 | 296-301 | NN | denotes | Mapk9 |
| T26807 | 290-295 | NN | denotes | mouse |
| T26806 | 288-289 | -COMMA- | denotes | , |
| T26805 | 287-288 | -RRB- | denotes | ) |
| T26804 | 276-287 | NN | denotes | J-040128-05 |
| T26803 | 275-276 | -LRB- | denotes | ( |
| T26802 | 269-274 | NN | denotes | Mapk8 |
| T26801 | 263-268 | NN | denotes | mouse |
| T26800 | 261-262 | -COMMA- | denotes | , |
| T26799 | 260-261 | -RRB- | denotes | ) |
| T26798 | 246-260 | NN | denotes | D-001810-10-05 |
| T26797 | 245-246 | -LRB- | denotes | ( |
| T26796 | 237-244 | NN | denotes | control |
| T26795 | 226-236 | JJ | denotes | non-coding |
| T26794 | 224-225 | -COMMA- | denotes | , |
| T26793 | 223-224 | -RRB- | denotes | ) |
| T26792 | 212-223 | NN | denotes | L-040658-00 |
| T26791 | 211-212 | -LRB- | denotes | ( |
| T26790 | 206-210 | NN | denotes | PDK1 |
| T26789 | 200-205 | NN | denotes | mouse |
| T26788 | 198-199 | -COMMA- | denotes | , |
| T26787 | 197-198 | -RRB- | denotes | ) |
| T26786 | 186-197 | NN | denotes | L-065427-00 |
| T26785 | 185-186 | -LRB- | denotes | ( |
| T26784 | 180-184 | NN | denotes | mTOR |
| T26783 | 174-179 | NN | denotes | mouse |
| T26782 | 172-173 | -COMMA- | denotes | , |
| T26781 | 171-172 | -RRB- | denotes | ) |
| T26780 | 160-171 | NN | denotes | L-040891-00 |
| T26779 | 159-160 | -LRB- | denotes | ( |
| T26778 | 154-158 | NN | denotes | Akt3 |
| T26777 | 148-153 | NN | denotes | mouse |
| T26776 | 146-147 | -COMMA- | denotes | , |
| T26775 | 145-146 | -RRB- | denotes | ) |
| T26774 | 134-145 | NN | denotes | L-040782-00 |
| T26773 | 133-134 | -LRB- | denotes | ( |
| T26772 | 128-132 | NN | denotes | Akt2 |
| T26771 | 122-127 | NN | denotes | mouse |
| T26770 | 120-121 | -COMMA- | denotes | , |
| T26769 | 119-120 | -RRB- | denotes | ) |
| T26768 | 108-119 | NN | denotes | L-040709-00 |
| T26767 | 107-108 | -LRB- | denotes | ( |
| T26766 | 102-106 | NN | denotes | Akt1 |
| T26765 | 96-101 | NN | denotes | mouse |
| T26764 | 94-95 | -COMMA- | denotes | , |
| T26763 | 93-94 | -RRB- | denotes | ) |
| T26762 | 82-93 | NN | denotes | L-045791-00 |
| T26761 | 78-81 | CC | denotes | and |
| T26760 | 66-77 | NN | denotes | L-040893-00 |
| T26759 | 65-66 | -LRB- | denotes | ( |
| T26758 | 57-64 | NN | denotes | protein |
| T26757 | 54-56 | NN | denotes | S6 |
| T26756 | 44-53 | JJ | denotes | ribosomal |
| T26755 | 38-43 | NNP | denotes | Mouse |
| T26754 | 27-37 | NNP | denotes | Dharmacon. |
| T26753 | 22-26 | IN | denotes | from |
| T26752 | 12-21 | VB | denotes | purchased |
| T26751 | 7-11 | VB | denotes | were |
| T26750 | 0-6 | NN | denotes | siRNAs |
| R18351 | T26750 | T26751 | arg1Of | siRNAs,were |
| R18352 | T26750 | T26752 | arg2Of | siRNAs,purchased |
| R18353 | T26752 | T26751 | arg2Of | purchased,were |
| R18354 | T26752 | T26753 | arg1Of | purchased,from |
| R18355 | T26755 | T26754 | arg1Of | Mouse,Dharmacon. |
| R18356 | T26758 | T26755 | arg1Of | protein,Mouse |
| R18357 | T26758 | T26756 | arg1Of | protein,ribosomal |
| R18358 | T26758 | T26757 | arg1Of | protein,S6 |
| R18359 | T26758 | T26759 | arg1Of | protein,( |
| R18360 | T26758 | T26764 | arg1Of | protein,"," |
| R18361 | T26760 | T26761 | arg1Of | L-040893-00,and |
| R18362 | T26761 | T26759 | arg2Of | and,( |
| R18363 | T26762 | T26761 | arg2Of | L-045791-00,and |
| R18364 | T26763 | T26759 | arg3Of | ),( |
| R18365 | T26764 | T26770 | arg1Of | ",","," |
| R18366 | T26766 | T26764 | arg2Of | Akt1,"," |
| R18367 | T26766 | T26765 | arg1Of | Akt1,mouse |
| R18368 | T26766 | T26767 | arg1Of | Akt1,( |
| R18369 | T26768 | T26767 | arg2Of | L-040709-00,( |
| R18370 | T26769 | T26767 | arg3Of | ),( |
| R18371 | T26770 | T26788 | arg1Of | ",","," |
| R18372 | T26772 | T26771 | arg1Of | Akt2,mouse |
| R18373 | T26772 | T26773 | arg1Of | Akt2,( |
| R18374 | T26772 | T26776 | arg1Of | Akt2,"," |
| R18375 | T26774 | T26773 | arg2Of | L-040782-00,( |
| R18376 | T26775 | T26773 | arg3Of | ),( |
| R18377 | T26776 | T26782 | arg1Of | ",","," |
| R18378 | T26778 | T26776 | arg2Of | Akt3,"," |
| R18379 | T26778 | T26777 | arg1Of | Akt3,mouse |
| R18380 | T26778 | T26779 | arg1Of | Akt3,( |
| R18381 | T26780 | T26779 | arg2Of | L-040891-00,( |
| R18382 | T26781 | T26779 | arg3Of | ),( |
| R18383 | T26782 | T26770 | arg2Of | ",","," |
| R18384 | T26784 | T26782 | arg2Of | mTOR,"," |
| R18385 | T26784 | T26783 | arg1Of | mTOR,mouse |
| R18386 | T26784 | T26785 | arg1Of | mTOR,( |
| R18387 | T26786 | T26785 | arg2Of | L-065427-00,( |
| R18388 | T26787 | T26785 | arg3Of | ),( |
| R18389 | T26788 | T26753 | arg2Of | ",",from |
| R18390 | T26788 | T26794 | arg1Of | ",","," |
| R18391 | T26790 | T26788 | arg2Of | PDK1,"," |
| R18392 | T26790 | T26789 | arg1Of | PDK1,mouse |
| R18393 | T26790 | T26791 | arg1Of | PDK1,( |
| R18394 | T26792 | T26791 | arg2Of | L-040658-00,( |
| R18395 | T26793 | T26791 | arg3Of | ),( |
| R18396 | T26796 | T26795 | arg1Of | control,non-coding |
| R18397 | T26796 | T26797 | arg1Of | control,( |
| R18398 | T26796 | T26800 | arg1Of | control,"," |
| R18399 | T26798 | T26797 | arg2Of | D-001810-10-05,( |
| R18400 | T26799 | T26797 | arg3Of | ),( |
| R18401 | T26800 | T26806 | arg1Of | ",","," |
| R18402 | T26802 | T26800 | arg2Of | Mapk8,"," |
| R18403 | T26802 | T26801 | arg1Of | Mapk8,mouse |
| R18404 | T26802 | T26803 | arg1Of | Mapk8,( |
| R18405 | T26804 | T26803 | arg2Of | J-040128-05,( |
| R18406 | T26805 | T26803 | arg3Of | ),( |
| R18407 | T26806 | T26794 | arg2Of | ",","," |
| R18408 | T26806 | T26819 | modOf | ",",NA w |
| R18409 | T26808 | T26806 | arg2Of | Mapk9,"," |
| R18410 | T26808 | T26807 | arg1Of | Mapk9,mouse |
| R18411 | T26808 | T26809 | arg1Of | Mapk9,( |
| R18412 | T26810 | T26809 | arg2Of | J-040134-05,( |
| R18413 | T26811 | T26809 | arg3Of | ),( |
| R18414 | T26816 | T26815 | arg2Of | L-043776-00,( |
| R18415 | T26817 | T26815 | arg3Of | ),( |
| R18416 | T26818 | T26813 | arg1Of | . siR,mouse |
| R18417 | T26818 | T26814 | arg1Of | . siR,Jun |
| R18418 | T26818 | T26815 | arg1Of | . siR,( |
| R18419 | T26818 | T26819 | arg1Of | . siR,NA w |
| R18420 | T26818 | T26820 | arg2Of | . siR,ere transfe |
| R18421 | T26820 | T26812 | arg1Of | ere transfe,"," |
| R18422 | T26820 | T26819 | arg2Of | ere transfe,NA w |
| R18423 | T26820 | T26821 | modOf | ere transfe,cted |
| R18424 | T26820 | T26827 | arg1Of | ere transfe,i |
| R18425 | T26820 | T26828 | arg1Of | ere transfe,"trogen), " |
| R18426 | T26823 | T26821 | arg2Of | NAiMAX ,cted |
| R18427 | T26823 | T26822 | arg1Of | NAiMAX ,using R |
| R18428 | T26823 | T26824 | arg1Of | NAiMAX ,r |
| R18429 | T26825 | T26824 | arg2Of | eagent (In,r |
| R18430 | T26826 | T26824 | arg3Of | v,r |
| R18431 | T26829 | T26828 | arg2Of | ac,"trogen), " |
| R18432 | T26831 | T26829 | arg2Of | ufacturer’s rec,ac |
| R18433 | T26831 | T26830 | arg1Of | ufacturer’s rec,cording to man |
| R18434 | T26834 | T26832 | arg2Of | hr,After |
| R18435 | T26834 | T26833 | arg1Of | hr,72 |
| R18436 | T26836 | T26837 | arg1Of | cells,were |
| R18437 | T26836 | T26838 | arg2Of | cells,treated |
| R18438 | T26838 | T26832 | arg1Of | treated,After |
| R18439 | T26838 | T26835 | arg1Of | treated,"," |
| R18440 | T26838 | T26837 | arg2Of | treated,were |
| R18441 | T26838 | T26839 | arg1Of | treated,with |
| R18442 | T26838 | T26843 | arg1Of | treated,for |
| R18443 | T26840 | T26841 | arg1Of | zVAD.fmk,or |
| R18444 | T26841 | T26839 | arg2Of | or,with |
| R18445 | T26842 | T26841 | arg2Of | TNFα,or |
| R18446 | T26845 | T26844 | arg1Of | hr,9 |
| R18447 | T26845 | T26846 | arg1Of | hr,( |
| R18448 | T26845 | T26852 | arg1Of | hr,or |
| R18449 | T26847 | T26848 | arg1Of | RNA,or |
| R18450 | T26848 | T26846 | arg2Of | or,( |
| R18451 | T26850 | T26848 | arg2Of | blot,or |
| R18452 | T26850 | T26849 | arg1Of | blot,Western |
| R18453 | T26851 | T26846 | arg3Of | ),( |
| R18454 | T26852 | T26843 | arg2Of | or,for |
| R18455 | T26854 | T26852 | arg2Of | hr,or |
| R18456 | T26854 | T26853 | arg1Of | hr,24 |
| R18457 | T26854 | T26855 | arg1Of | hr,( |
| R18458 | T26857 | T26855 | arg2Of | viability,( |
| R18459 | T26857 | T26856 | arg1Of | viability,cell |
| R18460 | T26858 | T26855 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26736 | 495-499 | Protein | denotes | TNFα |
| T26735 | 296-301 | Protein | denotes | Mapk9 |
| T26734 | 269-274 | Protein | denotes | Mapk8 |
| T26733 | 206-210 | Protein | denotes | PDK1 |
| T26732 | 154-158 | Protein | denotes | Akt3 |
| T26731 | 128-132 | Protein | denotes | Akt2 |
| T26730 | 102-106 | Protein | denotes | Akt1 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26874 | 495-499 | http://www.uniprot.org/uniprot/P01375 | denotes | TNFα |
| T26873 | 180-184 | http://www.uniprot.org/uniprot/P42345 | denotes | mTOR |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26737 | 206-210 | http://purl.obolibrary.org/obo/GO_0004740 | denotes | PDK1 |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26738 | 206-210 | http://purl.obolibrary.org/obo/GO_0004740 | denotes | PDK1 |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26740 | 541-545 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T26739 | 459-464 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26722 | 446-557 | Sentence | denotes | After 72 hr, cells were treated with zVAD.fmk or TNFα for 9 hr (RNA or Western blot) or 24 hr (cell viability). |
| T26721 | 0-445 | Sentence | denotes | siRNAs were purchased from Dharmacon. Mouse ribosomal S6 protein (L-040893-00 and L-045791-00), mouse Akt1 (L-040709-00), mouse Akt2 (L-040782-00), mouse Akt3 (L-040891-00), mouse mTOR (L-065427-00), mouse PDK1 (L-040658-00), non-coding control (D-001810-10-05), mouse Mapk8 (J-040128-05), mouse Mapk9 (J-040134-05), mouse Jun (L-043776-00). siRNA were transfected using RNAiMAX reagent (Invitrogen), according to manufacturer’s recommendations. |
| T338 | 0-37 | Sentence | denotes | siRNAs were purchased from Dharmacon. |
| T339 | 38-445 | Sentence | denotes | Mouse ribosomal S6 protein (L-040893-00 and L-045791-00), mouse Akt1 (L-040709-00), mouse Akt2 (L-040782-00), mouse Akt3 (L-040891-00), mouse mTOR (L-065427-00), mouse PDK1 (L-040658-00), non-coding control (D-001810-10-05), mouse Mapk8 (J-040128-05), mouse Mapk9 (J-040134-05), mouse Jun (L-043776-00). siRNA were transfected using RNAiMAX reagent (Invitrogen), according to manufacturer’s recommendations. |
| T340 | 446-557 | Sentence | denotes | After 72 hr, cells were treated with zVAD.fmk or TNFα for 9 hr (RNA or Western blot) or 24 hr (cell viability). |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26747 | 495-499 | Protein | denotes | TNFα |
| T26746 | 296-301 | Protein | denotes | Mapk9 |
| T26745 | 269-274 | Protein | denotes | Mapk8 |
| T26744 | 206-210 | Protein | denotes | PDK1 |
| T26743 | 154-158 | Protein | denotes | Akt3 |
| T26742 | 128-132 | Protein | denotes | Akt2 |
| T26741 | 102-106 | Protein | denotes | Akt1 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26872 | 495-499 | Protein | denotes | TNFα |
| T26871 | 296-301 | Protein | denotes | Mapk9 |
| T26870 | 269-274 | Protein | denotes | Mapk8 |
| T26869 | 206-210 | Protein | denotes | PDK1 |
| T26868 | 154-158 | Protein | denotes | Akt3 |
| T26867 | 128-132 | Protein | denotes | Akt2 |
| T26866 | 102-106 | Protein | denotes | Akt1 |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26893 | 269-274 | Protein | denotes | Mapk8 |
| T26892 | 206-210 | Protein | denotes | PDK1 |
| T26891 | 154-158 | Protein | denotes | Akt3 |
| T26890 | 128-132 | Protein | denotes | Akt2 |
| T26889 | 102-106 | Protein | denotes | Akt1 |
| T26895 | 495-499 | Protein | denotes | TNFα |
| T26894 | 296-301 | Protein | denotes | Mapk9 |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26881 | 495-499 | Protein | denotes | TNFα |
| T26880 | 296-301 | Protein | denotes | Mapk9 |
| T26879 | 269-274 | Protein | denotes | Mapk8 |
| T26878 | 206-210 | Protein | denotes | PDK1 |
| T26877 | 154-158 | Protein | denotes | Akt3 |
| T26876 | 128-132 | Protein | denotes | Akt2 |
| T26875 | 102-106 | Protein | denotes | Akt1 |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26928 | 96-120 | Protein | denotes | mouse Akt1 (L-040709-00) |
| T26927 | 54-56 | Entity | denotes | S6 |
| T26926 | 459-464 | Entity | denotes | cells |
| T26925 | 371-400 | Entity | denotes | RNAiMAX reagent (Invitrogen), |
| T26924 | 38-94 | Protein | denotes | Mouse ribosomal S6 protein (L-040893-00 and L-045791-00) |
| T26923 | 495-530 | Protein | denotes | TNFα for 9 hr (RNA or Western blot) |
| T26922 | 371-400 | Protein | denotes | RNAiMAX reagent (Invitrogen), |
| T26921 | 541-555 | Entity | denotes | cell viability |
| T26920 | 483-491 | Entity | denotes | zVAD.fmk |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27043 | 556-557 | . | denotes | . |
| T27042 | 555-556 | -RRB- | denotes | ) |
| T27041 | 546-555 | NN | denotes | viability |
| T27040 | 541-545 | NN | denotes | cell |
| T27039 | 540-541 | -LRB- | denotes | ( |
| T27038 | 537-539 | NN | denotes | hr |
| T27037 | 534-536 | CD | denotes | 24 |
| T27036 | 531-533 | CC | denotes | or |
| T27035 | 529-530 | -RRB- | denotes | ) |
| T27034 | 525-529 | NN | denotes | blot |
| T27033 | 517-524 | NNP | denotes | Western |
| T27032 | 514-516 | CC | denotes | or |
| T27031 | 510-513 | NNP | denotes | RNA |
| T27030 | 509-510 | -LRB- | denotes | ( |
| T27029 | 506-508 | NN | denotes | hr |
| T27028 | 504-505 | CD | denotes | 9 |
| T27027 | 500-503 | IN | denotes | for |
| T27026 | 495-499 | NNP | denotes | TNFα |
| T27025 | 492-494 | CC | denotes | or |
| T27024 | 483-491 | NNP | denotes | zVAD.fmk |
| T27023 | 478-482 | IN | denotes | with |
| T27022 | 470-477 | VBN | denotes | treated |
| T27021 | 465-469 | VBD | denotes | were |
| T27020 | 459-464 | NNS | denotes | cells |
| T27019 | 457-458 | , | denotes | , |
| T27018 | 455-457 | NN | denotes | hr |
| T27017 | 452-454 | CD | denotes | 72 |
| T27016 | 446-451 | IN | denotes | After |
| T27015 | 444-445 | . | denotes | . |
| T27014 | 429-444 | NNS | denotes | recommendations |
| T27013 | 414-426 | NN | denotes | manufacturer |
| T27012 | 411-413 | TO | denotes | to |
| T27011 | 401-410 | VBG | denotes | according |
| T27010 | 399-400 | , | denotes | , |
| T27009 | 398-399 | -RRB- | denotes | ) |
| T27008 | 388-398 | NNP | denotes | Invitrogen |
| T27007 | 387-388 | -LRB- | denotes | ( |
| T27006 | 379-386 | NN | denotes | reagent |
| T27005 | 371-378 | NNP | denotes | RNAiMAX |
| T27004 | 365-370 | VBG | denotes | using |
| T27003 | 353-364 | VBN | denotes | transfected |
| T27002 | 348-352 | VBD | denotes | were |
| T27001 | 342-347 | NN | denotes | siRNA |
| T27000 | 340-341 | . | denotes | . |
| T26999 | 339-340 | -RRB- | denotes | ) |
| T26998 | 328-339 | NN | denotes | L-043776-00 |
| T26997 | 327-328 | -LRB- | denotes | ( |
| T26996 | 323-326 | NN | denotes | Jun |
| T26995 | 317-322 | NN | denotes | mouse |
| T26994 | 315-316 | , | denotes | , |
| T26993 | 314-315 | -RRB- | denotes | ) |
| T26992 | 303-314 | NNP | denotes | J-040134-05 |
| T26991 | 302-303 | -LRB- | denotes | ( |
| T26990 | 296-301 | NNP | denotes | Mapk9 |
| T26989 | 290-295 | NN | denotes | mouse |
| T26988 | 288-289 | , | denotes | , |
| T26987 | 287-288 | -RRB- | denotes | ) |
| T26986 | 276-287 | NNP | denotes | J-040128-05 |
| T26985 | 275-276 | -LRB- | denotes | ( |
| T26984 | 269-274 | NNP | denotes | Mapk8 |
| T26983 | 263-268 | NN | denotes | mouse |
| T26982 | 261-262 | , | denotes | , |
| T26981 | 260-261 | -RRB- | denotes | ) |
| T26980 | 246-260 | NNP | denotes | D-001810-10-05 |
| T26979 | 245-246 | -LRB- | denotes | ( |
| T26978 | 237-244 | NN | denotes | control |
| T26977 | 226-236 | JJ | denotes | non-coding |
| T26976 | 224-225 | , | denotes | , |
| T26975 | 223-224 | -RRB- | denotes | ) |
| T26974 | 212-223 | NNP | denotes | L-040658-00 |
| T26973 | 211-212 | -LRB- | denotes | ( |
| T26972 | 206-210 | NNP | denotes | PDK1 |
| T26971 | 200-205 | NN | denotes | mouse |
| T26970 | 198-199 | , | denotes | , |
| T26969 | 197-198 | -RRB- | denotes | ) |
| T26968 | 186-197 | NNP | denotes | L-065427-00 |
| T26967 | 185-186 | -LRB- | denotes | ( |
| T26966 | 180-184 | NNP | denotes | mTOR |
| T26965 | 174-179 | NN | denotes | mouse |
| T26964 | 172-173 | , | denotes | , |
| T26963 | 171-172 | -RRB- | denotes | ) |
| T26962 | 160-171 | NNP | denotes | L-040891-00 |
| T26961 | 159-160 | -LRB- | denotes | ( |
| T26960 | 154-158 | NNP | denotes | Akt3 |
| T26959 | 148-153 | NN | denotes | mouse |
| T26958 | 146-147 | , | denotes | , |
| T26957 | 145-146 | -RRB- | denotes | ) |
| T26956 | 134-145 | NNP | denotes | L-040782-00 |
| T26955 | 133-134 | -LRB- | denotes | ( |
| T26954 | 128-132 | NNP | denotes | Akt2 |
| T26953 | 122-127 | NN | denotes | mouse |
| T26952 | 120-121 | , | denotes | , |
| T26951 | 119-120 | -RRB- | denotes | ) |
| T26950 | 108-119 | NNP | denotes | L-040709-00 |
| T26949 | 107-108 | -LRB- | denotes | ( |
| T26948 | 102-106 | NNP | denotes | Akt1 |
| T26947 | 96-101 | NN | denotes | mouse |
| T26946 | 94-95 | , | denotes | , |
| T26945 | 93-94 | -RRB- | denotes | ) |
| T26944 | 82-93 | NN | denotes | L-045791-00 |
| T26943 | 78-81 | CC | denotes | and |
| T26942 | 66-77 | NN | denotes | L-040893-00 |
| T26941 | 65-66 | -LRB- | denotes | ( |
| T26940 | 57-64 | NN | denotes | protein |
| T26939 | 54-56 | NNP | denotes | S6 |
| T26938 | 44-53 | JJ | denotes | ribosomal |
| T26937 | 38-43 | NNP | denotes | Mouse |
| T26936 | 36-37 | . | denotes | . |
| T26935 | 27-36 | NNP | denotes | Dharmacon |
| T26934 | 22-26 | IN | denotes | from |
| T26933 | 12-21 | VBN | denotes | purchased |
| T26932 | 7-11 | VBD | denotes | were |
| T26931 | 0-6 | NNPS | denotes | siRNAs |
| R18488 | T26931 | T26933 | nsubjpass | siRNAs,purchased |
| R18489 | T26932 | T26933 | auxpass | were,purchased |
| R18490 | T26933 | T26933 | ROOT | purchased,purchased |
| R18491 | T26934 | T26933 | prep | from,purchased |
| R18492 | T26935 | T26934 | pobj | Dharmacon,from |
| R18493 | T26936 | T26933 | punct | .,purchased |
| R18494 | T26937 | T26940 | nmod | Mouse,protein |
| R18495 | T26938 | T26940 | amod | ribosomal,protein |
| R18496 | T26939 | T26940 | compound | S6,protein |
| R18497 | T26940 | T26940 | ROOT | protein,protein |
| R18498 | T26941 | T26942 | punct | (,L-040893-00 |
| R18499 | T26942 | T26940 | appos | L-040893-00,protein |
| R18500 | T26943 | T26942 | cc | and,L-040893-00 |
| R18501 | T26944 | T26942 | conj | L-045791-00,L-040893-00 |
| R18502 | T26945 | T26944 | punct | ),L-045791-00 |
| R18503 | T26946 | T26942 | punct | ",",L-040893-00 |
| R18504 | T26947 | T26948 | compound | mouse,Akt1 |
| R18505 | T26948 | T26942 | appos | Akt1,L-040893-00 |
| R18506 | T26949 | T26950 | punct | (,L-040709-00 |
| R18507 | T26950 | T26948 | appos | L-040709-00,Akt1 |
| R18508 | T26951 | T26950 | punct | ),L-040709-00 |
| R18509 | T26952 | T26948 | punct | ",",Akt1 |
| R18510 | T26953 | T26954 | compound | mouse,Akt2 |
| R18511 | T26954 | T26948 | appos | Akt2,Akt1 |
| R18512 | T26955 | T26956 | punct | (,L-040782-00 |
| R18513 | T26956 | T26954 | appos | L-040782-00,Akt2 |
| R18514 | T26957 | T26956 | punct | ),L-040782-00 |
| R18515 | T26958 | T26954 | punct | ",",Akt2 |
| R18516 | T26959 | T26960 | compound | mouse,Akt3 |
| R18517 | T26960 | T26954 | conj | Akt3,Akt2 |
| R18518 | T26961 | T26962 | punct | (,L-040891-00 |
| R18519 | T26962 | T26960 | appos | L-040891-00,Akt3 |
| R18520 | T26963 | T26962 | punct | ),L-040891-00 |
| R18521 | T26964 | T26960 | punct | ",",Akt3 |
| R18522 | T26965 | T26966 | compound | mouse,mTOR |
| R18523 | T26966 | T26960 | conj | mTOR,Akt3 |
| R18524 | T26967 | T26968 | punct | (,L-065427-00 |
| R18525 | T26968 | T26966 | appos | L-065427-00,mTOR |
| R18526 | T26969 | T26966 | punct | ),mTOR |
| R18527 | T26970 | T26966 | punct | ",",mTOR |
| R18528 | T26971 | T26972 | compound | mouse,PDK1 |
| R18529 | T26972 | T26966 | conj | PDK1,mTOR |
| R18530 | T26973 | T26974 | punct | (,L-040658-00 |
| R18531 | T26974 | T26972 | appos | L-040658-00,PDK1 |
| R18532 | T26975 | T26972 | punct | ),PDK1 |
| R18533 | T26976 | T26972 | punct | ",",PDK1 |
| R18534 | T26977 | T26978 | amod | non-coding,control |
| R18535 | T26978 | T26972 | appos | control,PDK1 |
| R18536 | T26979 | T26980 | punct | (,D-001810-10-05 |
| R18537 | T26980 | T26972 | appos | D-001810-10-05,PDK1 |
| R18538 | T26981 | T26980 | punct | ),D-001810-10-05 |
| R18539 | T26982 | T26972 | punct | ",",PDK1 |
| R18540 | T26983 | T26984 | compound | mouse,Mapk8 |
| R18541 | T26984 | T26972 | conj | Mapk8,PDK1 |
| R18570 | T27013 | T27014 | poss | manufacturer,recommendations |
| R18571 | T27014 | T27012 | pobj | recommendations,to |
| R18572 | T27015 | T27003 | punct | .,transfected |
| R18573 | T27016 | T27022 | prep | After,treated |
| R18574 | T27017 | T27018 | nummod | 72,hr |
| R18575 | T27018 | T27016 | pobj | hr,After |
| R18576 | T27019 | T27022 | punct | ",",treated |
| R18577 | T27020 | T27022 | nsubjpass | cells,treated |
| R18578 | T27021 | T27022 | auxpass | were,treated |
| R18579 | T27022 | T27022 | ROOT | treated,treated |
| R18580 | T27023 | T27022 | prep | with,treated |
| R18581 | T27024 | T27023 | pobj | zVAD.fmk,with |
| R18582 | T27025 | T27024 | cc | or,zVAD.fmk |
| R18583 | T27026 | T27024 | conj | TNFα,zVAD.fmk |
| R18584 | T27027 | T27022 | prep | for,treated |
| R18585 | T27028 | T27029 | nummod | 9,hr |
| R18586 | T27029 | T27027 | pobj | hr,for |
| R18587 | T27030 | T27029 | punct | (,hr |
| R18588 | T27031 | T27029 | appos | RNA,hr |
| R18589 | T27032 | T27031 | cc | or,RNA |
| R18590 | T27033 | T27034 | compound | Western,blot |
| R18591 | T27034 | T27031 | conj | blot,RNA |
| R18592 | T27035 | T27034 | punct | ),blot |
| R18593 | T27036 | T27034 | cc | or,blot |
| R18594 | T27037 | T27038 | nummod | 24,hr |
| R18595 | T27038 | T27034 | conj | hr,blot |
| R18596 | T27039 | T27041 | punct | (,viability |
| R18597 | T27040 | T27041 | compound | cell,viability |
| R18598 | T27041 | T27038 | appos | viability,hr |
| R18599 | T27042 | T27038 | punct | ),hr |
| R18600 | T27043 | T27022 | punct | .,treated |
| R18567 | T27010 | T27003 | punct | ",",transfected |
| R18568 | T27011 | T27003 | prep | according,transfected |
| R18569 | T27012 | T27011 | prep | to,according |
| R18542 | T26985 | T26986 | punct | (,J-040128-05 |
| R18543 | T26986 | T26984 | appos | J-040128-05,Mapk8 |
| R18544 | T26987 | T26984 | punct | ),Mapk8 |
| R18545 | T26988 | T26984 | punct | ",",Mapk8 |
| R18546 | T26989 | T26990 | compound | mouse,Mapk9 |
| R18547 | T26990 | T26984 | conj | Mapk9,Mapk8 |
| R18548 | T26991 | T26992 | punct | (,J-040134-05 |
| R18549 | T26992 | T26990 | appos | J-040134-05,Mapk9 |
| R18550 | T26993 | T26992 | punct | ),J-040134-05 |
| R18551 | T26994 | T26990 | punct | ",",Mapk9 |
| R18552 | T26995 | T26996 | compound | mouse,Jun |
| R18553 | T26996 | T26990 | appos | Jun,Mapk9 |
| R18554 | T26997 | T26998 | punct | (,L-043776-00 |
| R18555 | T26998 | T26996 | parataxis | L-043776-00,Jun |
| R18556 | T26999 | T26998 | punct | ),L-043776-00 |
| R18557 | T27000 | T26940 | punct | .,protein |
| R18558 | T27001 | T27003 | nsubjpass | siRNA,transfected |
| R18559 | T27002 | T27003 | auxpass | were,transfected |
| R18560 | T27003 | T27003 | ROOT | transfected,transfected |
| R18561 | T27004 | T27003 | advcl | using,transfected |
| R18562 | T27005 | T27006 | compound | RNAiMAX,reagent |
| R18563 | T27006 | T27004 | dobj | reagent,using |
| R18564 | T27007 | T27006 | punct | (,reagent |
| R18565 | T27008 | T27006 | appos | Invitrogen,reagent |
| R18566 | T27009 | T27008 | punct | ),Invitrogen |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26907 | 483-499 | Protein | denotes | zVAD.fmk or TNFα |
| T26906 | 328-339 | Entity | denotes | L-043776-00 |
| T26905 | 237-244 | Regulation | denotes | control |
| T26904 | 186-197 | Entity | denotes | L-065427-00 |
| T26903 | 66-77 | Entity | denotes | L-040893-00 |
| T26902 | 296-301 | Protein | denotes | Mapk9 |
| T26901 | 269-274 | Protein | denotes | Mapk8 |
| T26900 | 206-210 | Protein | denotes | PDK1 |
| T26899 | 154-158 | Protein | denotes | Akt3 |
| T26898 | 128-132 | Protein | denotes | Akt2 |
| T26897 | 102-106 | Protein | denotes | Akt1 |
| T26896 | 38-64 | Protein | denotes | Mouse ribosomal S6 protein |
| R18476 | T26896 | T26903 | partOf | Mouse ribosomal S6 protein,L-040893-00 |
| R18477 | T26897 | T26905 | themeOf | Akt1,control |
| R18478 | T26897 | T26903 | partOf | Akt1,L-040893-00 |
| R18479 | T26897 | T26904 | partOf | Akt1,L-065427-00 |
| R18480 | T26897 | T26906 | partOf | Akt1,L-043776-00 |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26719 | 495-499 | Protein | denotes | TNFα |
| T26718 | 296-301 | Protein | denotes | Mapk9 |
| T26717 | 269-274 | Protein | denotes | Mapk8 |
| T26716 | 206-210 | Protein | denotes | PDK1 |
| T26715 | 154-158 | Protein | denotes | Akt3 |
| T26714 | 128-132 | Protein | denotes | Akt2 |
| T26713 | 102-106 | Protein | denotes | Akt1 |
| T26712 | 495-499 | Protein | denotes | TNFα |
| T26711 | 296-301 | Protein | denotes | Mapk9 |
| T26710 | 269-274 | Protein | denotes | Mapk8 |
| T26709 | 206-210 | Protein | denotes | PDK1 |
| T26708 | 154-158 | Protein | denotes | Akt3 |
| T26707 | 128-132 | Protein | denotes | Akt2 |
| T26706 | 102-106 | Protein | denotes | Akt1 |