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PMC:3585731 / 5355-5488 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T2858 117-121 Protein denotes TNFα

2_test

Id Subject Object Predicate Lexical cue
23469174-19109899-90505413 123-125 19109899 denotes 10
23469174-16408008-90505414 129-131 16408008 denotes 17

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3251 131-132 -RRB- denotes ]
T3250 129-131 CD denotes 17
T3249 128-129 -LRB- denotes [
T3248 126-127 -COMMA- denotes ,
T3247 125-126 -RRB- denotes ]
T3246 123-125 CD denotes 10
T3245 122-123 -LRB- denotes [
T3244 117-121 NN denotes TNFα
T3243 112-116 IN denotes with
T3242 100-111 NN denotes stimulation
T3241 90-99 VB denotes following
T3240 84-89 NN denotes death
T3239 79-83 NN denotes cell
T3238 67-78 JJ denotes necroptotic
T3237 59-66 VB denotes undergo
T3236 53-58 NN denotes cells
T3235 48-52 NN denotes L929
T3234 35-47 NN denotes fibrosarcoma
T3233 29-34 NN denotes mouse
T3232 24-28 IN denotes that
T3231 12-23 VB denotes established
T3230 7-11 VB denotes been
T3229 3-6 VB denotes has
T3228 0-2 PRP denotes It
R2033 T3237 T3248 arg1Of undergo,","
R2034 T3237 T3249 arg1Of undergo,[
R2042 T3246 T3245 arg2Of 10,[
R2043 T3247 T3245 arg3Of ],[
R2044 T3250 T3249 arg2Of 17,[
R2045 T3251 T3249 arg3Of ],[
R2021 T3228 T3229 arg1Of It,has
R2022 T3228 T3230 arg1Of It,been
R2023 T3228 T3231 arg2Of It,established
R2024 T3231 T3229 arg2Of established,has
R2025 T3231 T3230 arg2Of established,been
R2026 T3236 T3233 arg1Of cells,mouse
R2027 T3236 T3234 arg1Of cells,fibrosarcoma
R2028 T3236 T3235 arg1Of cells,L929
R2029 T3236 T3237 arg1Of cells,undergo
R2030 T3237 T3231 arg3Of undergo,established
R2031 T3237 T3232 arg1Of undergo,that
R2032 T3237 T3241 arg1Of undergo,following
R2035 T3240 T3237 arg2Of death,undergo
R2036 T3240 T3238 arg1Of death,necroptotic
R2037 T3240 T3239 arg1Of death,cell
R2038 T3242 T3241 arg2Of stimulation,following
R2039 T3242 T3243 arg1Of stimulation,with
R2040 T3244 T3243 arg2Of TNFα,with
R2041 T3244 T3245 arg1Of TNFα,[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3040 117-121 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3953 117-121 http://www.uniprot.org/uniprot/P01375 denotes TNFα

GO-BP

Id Subject Object Predicate Lexical cue
T3122 84-89 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T3117 79-89 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death

GO-CC

Id Subject Object Predicate Lexical cue
T3162 53-58 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T2973 0-133 Sentence denotes It has been established that mouse fibrosarcoma L929 cells undergo necroptotic cell death following stimulation with TNFα [10], [17].
T38 0-133 Sentence denotes It has been established that mouse fibrosarcoma L929 cells undergo necroptotic cell death following stimulation with TNFα [10], [17].

simple1

Id Subject Object Predicate Lexical cue
T3172 117-121 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T3918 117-121 Protein denotes TNFα

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4049 117-121 Protein denotes TNFα

DLUT931

Id Subject Object Predicate Lexical cue
T3975 117-121 Protein denotes TNFα

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4974 117-132 Protein denotes TNFα [10], [17]

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4173 132-133 . denotes .
T4172 131-132 NNP denotes ]
T4171 129-131 CD denotes 17
T4170 128-129 NNP denotes [
T4169 126-127 , denotes ,
T4168 125-126 NNP denotes ]
T4167 123-125 CD denotes 10
T4166 122-123 NNP denotes [
T4165 117-121 NNP denotes TNFα
T4164 112-116 IN denotes with
T4163 100-111 NN denotes stimulation
T4162 90-99 VBG denotes following
T4161 84-89 NN denotes death
T4160 79-83 NN denotes cell
T4159 67-78 JJ denotes necroptotic
T4158 59-66 VBP denotes undergo
T4157 53-58 NNS denotes cells
T4156 48-52 NNP denotes L929
T4155 35-47 NN denotes fibrosarcoma
T4154 29-34 NN denotes mouse
T4153 24-28 IN denotes that
T4152 12-23 VBN denotes established
T4151 7-11 VBN denotes been
T4150 3-6 VBZ denotes has
T4149 0-2 PRP denotes It
R2769 T4149 T4152 nsubjpass It,established
R2770 T4150 T4152 aux has,established
R2771 T4151 T4152 auxpass been,established
R2772 T4152 T4152 ROOT established,established
R2773 T4153 T4158 mark that,undergo
R2774 T4154 T4157 compound mouse,cells
R2775 T4155 T4156 compound fibrosarcoma,L929
R2776 T4156 T4157 compound L929,cells
R2777 T4157 T4158 nsubj cells,undergo
R2778 T4158 T4152 ccomp undergo,established
R2779 T4159 T4163 amod necroptotic,stimulation
R2780 T4160 T4161 compound cell,death
R2781 T4161 T4162 npadvmod death,following
R2782 T4162 T4163 amod following,stimulation
R2783 T4163 T4158 dobj stimulation,undergo
R2784 T4164 T4158 prep with,undergo
R2785 T4165 T4166 compound TNFα,[
R2786 T4166 T4164 pobj [,with
R2787 T4167 T4168 nummod 10,]
R2788 T4168 T4166 conj ],[
R2789 T4169 T4168 punct ",",]
R2790 T4170 T4172 nmod [,]
R2791 T4171 T4172 nummod 17,]
R2792 T4172 T4168 conj ],]
R2793 T4173 T4152 punct .,established

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T4083 117-126 Protein denotes TNFα [10]

test3

Id Subject Object Predicate Lexical cue
T2895 117-121 Protein denotes TNFα
T2925 117-121 Protein denotes TNFα
T2924 90-99 Positive_regulation denotes following